Displaying 20 results from an estimated 900 matches similar to: "httpd error with and help_type = 'html', package = NULL"
2013 Jun 26
2
Error on executing functions from installed package
Hi,
I am currently building an R package and I am facing a peculiar problem
where some of the functions does not work within the package. However, if I
source the script the function works.
For example, in a method for parallelization of analysis on each chromosome
simultaneously I am receiving error at the following position of the code:
# this profile the information chromosome wise and
2013 May 01
1
Trouble with methods() after loading gdata package.
Greetings to r-help land.
I've run into some program crashes and I've traced them back to methods()
behavior
after the package gdata is loaded. I provide now a minimal re-producible
example. This seems bugish to me. How about you?
dat <- data.frame(x = rnorm(100), y = rnorm(100))
lm1 <- lm(y ~ x, data = dat)
methods(class = "lm")
## OK so far
library(gdata)
2008 Sep 09
2
match problem by rownames
Hi all,
While dat['a1',] and dat['a10',] produce the same results in the
following example, I'd like dat['a1',] to return NAs.
dat <- data.frame(x1 = paste(letters[1:5],10, sep=''), x2=rnorm(5))
rownames(dat) <- dat$x1
dat['a1',]
dat['a10',]
> sessionInfo()
R version 2.7.2 (2008-08-25)
i386-pc-mingw32
locale:
2017 Mar 08
2
Error in formatDL(nm, txt, indent = max(nchar(nm, "w")) + 3)
Hello:
A call to help(..., help_type='text') fails with "package='fda":
> install.packages('fda')
> help(package='fda', help_type='text')
Error in formatDL(nm, txt, indent = max(nchar(nm, "w")) + 3) :
incorrect values of 'indent' and 'width'
I have this wrapped inside "try" in
2012 Nov 19
6
tcltk freezing using MS Windows for R-2.14+
I am the maintainer of a Bioconductor package (affylmGUI) which uses
tcltk. It freezes inconsistently on MS Windows, but not Mac or Unix. see
details below.
After considerable testing I have reduced the problem from a few
thousand lines of code to 30 lines!
If you paste the following lines of code into an R window:
testGUI <- function(){
require(tcltk)
MainWindow <-
2011 Aug 20
2
hetlp_type text doen't work on Ubuntu
Hi,
I' using Ubuntu 10.10/11.04 and on both of the systems help doesn't
work unless I set options(help_type="html"). I hate to change context
and help_type='html' distracts me. I want text based help inside
console. Where should I look to fix this problem?
--
Amol
2009 Nov 10
1
Windows installer, HTML help, R 2.10.0
I'm not 100% sure this hasn't been covered already (I searched a bit,
but I had a little trouble filtering down to a useful number of useful
results). Anyway, when I install R on Windows, the installer asks to
set the default help type. For some reason, I can set it as HTML in
the installer, but the results open as if help_type = "text" by
default. I presume this is related to
2009 Mar 17
2
link in base help file fails.
I run R on MS Windows. In R2.9.0dev, I type ?base to get "R help for package
base" to open. I then select ".First" from the list of contents, getting a page
headed: "Initialization at Start of an R Session". About half way down there is
a sentence:
The command-line flag --vanilla implies --no-site-file, --no-init-file,
--no-restore and --no-environ. Under
2017 Mar 09
2
Error in formatDL(nm, txt, indent = max(nchar(nm, "w")) + 3)
This error can arise when getOption("width") is too small. 80 seems to be the
limit for me with R-3.3.2 on Windows.
Bill Dunlap
TIBCO Software
wdunlap tibco.com
On Wed, Mar 8, 2017 at 10:28 PM, Spencer Graves
<spencer.graves at prodsyse.com> wrote:
> Hello:
>
>
> I tried "debug(help)" with the problem mentioned below. It stopped
> with a call to
2010 Nov 03
1
rgl.snapshot() : no longer works?
Hi all,
> library(rgl)
> plot3d(1,1,1)
> snapshot3d("somefile.png")
Error in rgl.snapshot(...) :
pixmap save format not supported in this build
Why does this no longer work?
thanks,
Remko
> sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252
[3]
2008 Mar 25
1
regexp with [:upper:] (PR#11032)
Full_Name: Mark Bravington
Version: 2.6.2 patched
OS: Windows XP Pro
Submission from: (NULL) (140.79.22.104)
> grep( '[:upper:]', letters, val=T) # shurely shouldn't match anything ??
[1] "e" "p" "r" "u"
The converse ( '[:lower:]' and LETTERS) seems to work OK.
--please do not edit the information below--
Version:
platform =
2011 Aug 15
2
A small nag
Hi,
I am not sure how to fix the following error.
LGD <- c(11.6, 12.3, 15.8, 33.1, 43.5, 51.3,
67.3, 84.9)
cor (x=(file [1:47231,3:10]), y= rep (LGD, 47231), method = "pearson")
Error in cor(x = (file[1:47231, 3:10]), y = rep(LGD, 47231), method =
"pearson") :
incompatible dimensions
> sessionInfo()
R version 2.13.0 (2011-04-13)
2010 Oct 19
1
DLL not found
Dear R-helpers,
I have a fresh installation of windows vista, and R 2.12.0 (session info below).
Problem:
> require(sp)
Loading required package: sp
Error in library.dynam(lib, package, package.lib) :
DLL 'lattice' not found: maybe not installed for this architecture?
> require(lattice)
Loading required package: lattice
Failed with error: ?package 'lattice' is not
2011 Sep 16
1
grep problem in R-devel 2.14 r57004
Problem below with PCRE grep in R-devel; works fine in R-patched. (Unless there's been an absolutely massive change in rules for updated PCRE version 8.13; jeez I hope not)
> grep( '[.][.]', '', perl=TRUE)
Error in grep("[.][.]", "", perl = TRUE) :
invalid regular expression '[.][.]'
In addition: Warning message:
In grep("[.][.]",
2010 Nov 24
1
Difficulty loading packages into R version 2.12.0
Apologies for my previous effort in HTML which apparently was scrubbed
Dear R-users
I wonder if I could get advice on the above problem
I have just installed V 2.12.0 (I chose only the 32-bit version) into a new
directory (C:/R) on a 64bit Windows 7 machine
> sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=English_Australia.1252
2017 Jul 13
2
bnlearn and cpquery
Hi all
I have built a Bayesian network using discrete data using the bnlearn
package.
When I try to run the cpquery function on this data it returns NaN for some
some cases.
Running the cpquery in debug mode for such a case (n=10^5, method="lw")
creates the following output:
generated a grand total of 1e+05 samples.
> event has a probability mass of 14982.37 out of
2018 Jun 14
2
makeCluster Stall on 32-bit Windows
Good day,
I'm trying the example cl <- makeCluster(2, type = "SOCK") from the makeCluster documentation and the R command prompt never returns. I am using a 32-bit Windows 10 computer. The problem doesn't happen on another 64-bit Windows 10 computer but does happen on another 32-bit Windows 7 computer. Can anyone reproduce it? Are there any other options that can be passed to
2011 Jun 29
1
R-devel Digest, Vol 100, Issue 28
I get the same style of path as Hadley. This is on Windows 7 Home Premium with SP1.
I start R by clicking on the R-2.31.0 icon.
I'd assumed that it was a change that came with R-2.13.0!
(On 32-bit Windows XP, which I have just checked, I do indeed get the 8.3 paths.)
> R.home()
[1] "C:/Programs/R/R-2.13.0"
> sessionInfo()
R version 2.13.0 (2011-04-13)
Platform:
2010 Oct 08
1
R CMD SHLIB changes function name when compiling
Hi,
I'm trying to write a function in C for implementation with .Call. When
compiling using R CMD SHLIB characters seem to be added to the function
name.
Here's the complete C code from the file summariseMCMC.c:
#include<R.h>
#include<Rdefines.h>
#include<Rinternals.h>
void summariseMCMC(SEXP data) {
PROTECT(data=AS_NUMERIC(data));
UNPROTECT(1);
}
Then
2005 Dec 29
1
'last.warning' problem at startup; package Matrix (PR#8453)
On starting an R session, I get the messages:
Fatal errir: unable to restore save data in .RData
Error in fun(...): couldn't find function "assignInNamespace"
Error: .onLoad failed in 'loadNamespace' for 'Matrix'
The only object in my .RData is last.warning, thus:
> last.warning
$"optim or nlminb returned message false convergence (8)"