similar to: missing exported methods when compiling vignettes in R 3.0.0 RC

Hi everyone, I'm trying to diagnose a problem in my R package, but it is a little tricky since it seems to occur only with the Mac OSX CRAN binary build. My package starts a Rook server and opens a browser. On my own system (details below), when I build the package, I have no trouble. The Rook server starts and the page loads in the browser. However, if I've installed it from CRAN, I

I noticed that my package BayesFactor (http://cran.r-project.org/web/packages/BayesFactor/index.html) is not available on Mac OS, and the note says to see the check log. The only issue in the check log is a note: checking R code for possible problems ... NOTE all.Nways.env.mc : <local>: no visible binding for global variable 'i' all.Nways.env.mc: no visible binding for global

this is probably a question for gabor or achim but maybe someone else can answer it in case they are not around ? Ifr you paste the code below ( again you would need the zoo and chron libraries to be installed ), you should get the error "Error in Ops.POSIXt(frequency, freq) : %% not defined for "POSIXt" objects". What I want to do is take the numeric vector, lt, and

Dear R users, Thanks in advance. I am Deb, Statistician at NSW Department of Commerce, Sydney. I am using R 2.9.1 on Windows XP. This has reference to the package “MCMCpack”. My objective is to select a better model using various alternatives. I have provided here an example code from MCMCpack.pdf. The matrix of Bayes Factors is: model1 model2 model3 model1 1.000 14.08

Hello R Community, Subject: Bayes Factor A Bayesian ANOVA of the form: competitionBayesOut <- anovaBF(biomass ~ clipping, data = competition) Returns the following Error message: Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ?compare? for signature ?"BFlinearModel", "missing", "tbl_df"? My guess the problem is in

Dear R-Help, I am using the RDF package/ R 2.14 with the RDF package to download data from a website, and then use R to manipulate it. Text on the website is UTF-8. The RDF package's rdf_load command is converting it into a different encoding, which converts non-ASCII characters to unicode codes. On the webpage/sparql RDF: "4.5µg of cDNA was used" In R, the RDF triple gives:

Hola, Carlos: Gracias!. Muy buena idea!. No conocía ese paquete. Se entiende que funciona también en Linuz y Mac, ¿verdad?. Un saludo. Eva ________________________________ De: Carlos Ortega <cof@qualityexcellence.es> CC: daniel <daniel319@gmail.com>; "R-help-es@r-project.org" <R-help-es@r-project.org> Enviado: Miércoles 19 de junio de 2013 22:42 Asunto: Re:

Hi, it looks like save() is saving all contents of the calling environments if the object to be saved is *not* evaluated, although it is not that simple either. After many hours of troubleshooting, I'm still confused. Here is a reproducible example (also attached) with output. I let the code and the output talk for itself: peek <- function(file, from=1, to=500) {

Folks, I have Googled but not found much regarding arrayInd aside from the "which" help page. Any good examples or docs on what arrayInd does that is better or different from which()? In addition take the following 20x10 matrix: td<-structure(c(1, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 4, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 1, 6, 6, 6, 6, 6, 6, 6, 1, 6, 6, 6, 6,

Is there any way to write (8-bit) bytes to a file which works on all [R] platforms? I have been looking at 1) writeBin 2) writeChar 3) cat and neither of them manage to write arbitrary sequences of bytes (0-255). For instance, I would like to create a binary file of length three containing the bytes 0, 1 and 0. I [R] I have the following vector of bytes: bfr <- c(0,1,0) 1) For

On Jul 22, 2008, at 11:54 PM, Matthijs Kooijman wrote: > Hi Chris, > > >> I'd prefer to not turn this into a template. Why not just define a >> version that takes an array of uint64_t's or something like that? > because I want to be able to pass in iterators. I could define a > version that > takes std<uint64_t>::iterators, but next thing we know, we

Hi Chris, > What flavor of iterators do you want to pass in? vector or > smallvector? If so, a pointer to the first element + extents is fine. I was passing a std::vector in. And you are quite right, first element + size works like a charm. Since I am using a vector of uint64_t's instead of Value*, I did need to add an extra version of getIndexedType(), taking a uint64_t* instead

I am trying to create such module with API (it's equivalent to c++: const char* ss[] = {"s1","s2"};): @ss = global [2 x i8*] [i8* getelementptr inbounds ([3 x i8]* @.str1, i32 0, i32 0), i8* getelementptr inbounds ([3 x i8]* @.str2, i32 0, i32 0)] ; <[2 x i8*]*> [#uses=0] @.str1 = private constant [3 x i8] c"s1\00", align 1 ; <[3 x i8]*> [#uses=1]

Hello dear R-devel, When installing R 3.0.0 on Windows 7, and then running: require(tools) checkMD5sums(dir=R.home()) I get the following massage: files ‘etc/Rconsole’, ‘etc/Rprofile.site’ have the wrong MD5 checksums [1] FALSE This happens when using the 32 and the 64 bit version of R. And was also reported by 2 other users on other machines, as can be seen in the comments to this post:

We use XENMEM_add_to_physmap_range which is the preferred interface for foreign mappings. Signed-off-by: Ian Campbell <ian.campbell@citrix.com> --- arch/arm/include/asm/xen/interface.h | 1 + arch/arm/xen/enlighten.c | 100 +++++++++++++++++++++++++++++++++- arch/x86/include/asm/xen/interface.h | 1 + include/xen/interface/memory.h | 18 ++++++ 4 files changed,

Hello, I'm trying to rebuild a package (using R version 3.3.2 (2016-10-31)) that has not seen any changes since it was last built without problems in previous R versions. It fails during vignette building with: ---<--------------------cut here---------------start------------------->--- $ R CMD build diveMove * checking for file ?diveMove/DESCRIPTION? ... OK * preparing ?diveMove?: *

Dear all, how can I use vcovHC() to get robust/corrected standard errors from an arima() output? I ran an arima model with AR(1) and got the estimate, se, zvalue and p-value using coeftest(arima.output). However, I cannot use vcovHC(arima.output) to get corrected standard errors. It seems vcovHC works only with lm and plm objects? Is there another way I can get robust/corrected

Hi all Observe: x <- c(1,2) y <- c(1,-1) phi <- 1 p <- 2 par( mfrow=c(1,2)) plot(x , y, main=bquote( paste( p==.(p)," and ",phi==.(phi)) ) ) plot(y ~ x, main=bquote( paste( p==.(p)," and ",phi==.(phi)) ) ) par( mfrow=c(1,2)) On my system (details below), the first plot is correct (in my understanding), and produces a title reading "p=2 and phi=1"

Full_Name: Ross Darnell Version: 2.4.1 OS: Linux Submission from: (NULL) (130.102.133.33) rdarnell at pc:~/Data$ ls -al .RData -rwxrwxrwx 2 root root 13551 2006-12-06 08:58 .RData rdarnell at pc:~/Data$ R R version 2.4.1 (2006-12-18) Copyright (C) 2006 The R Foundation for Statistical Computing ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to

Hello, I have a minimal example that shows a problem I'm having with parallel processing. library(parallel) mcmapply(function(x, y) { print("Running") Sys.sleep(10) }, as.list(1:10), as.list(10:1), mc.cores = 16, SIMPLIFY = FALSE) I see "Running" printed once every ten seconds. I read the documentation for mcmapply, but I don't understand why it wouldn't