similar to: using openbabel plugins in R

Displaying 20 results from an estimated 500 matches similar to: "using openbabel plugins in R"

2013 Feb 03
1
Ports and WITH_LIBCPLUSPLUS
Hello, I wanted to try the new c++ stuff, ie clang-3.2, libc++ and libcxxrt, so I used poudriere to build a jail setup for that ( WITH_LIBCPLUSPLUS=yes in src.conf, CXXFLAGS+=-stdlib=libc++ and libsupc++.so.1 libcxxrt.so.1 in libmap.conf ), and started to build my normal set of packages ( see desktop.list ). Please note that I also have WITH_NEW_XORG=yes and WITH_KMS=yes, as well as using the
2018 Jul 07
3
Completar un for, que falla al faltarle algún dato.
Buenas noches; Además del proyecto que comenté antes y con el que sigo discutiendo, también me estoy peleando con otro... con el que también tropiezo. Necesito reordenar los datos presentados en dos columnas a filas y columnas. Los datos ideales serían algo así: Ques <- c(rep("Q1",3),rep("Q2",3),rep("Q3",3)) Info <- rep(c("aca", "ahi",
2018 Jan 31
3
Problems with "predict" function ii
I have realised that I should have used "detach" before attaching another dataframe, but even when I do this it's still giving me lots of lines, rather than just one: My code: m<-runif(1,0,1) m mres<-m*(seq(1,12)) mres ssd<-rexp(1,1) ssd devs<-rep(0,length(mres)) for(i in 1:length(mres)){devs[i]<-rnorm(1,0,ssd)} devs plot(-10,-10,xlim=c(1,24),ylim=c(0,20000))
2011 Dec 24
1
Need help! Trying to install USPS Shipping Assistant in WINE
Hi All, I just learned how to use wine to install windows application two days ago. So far I still couldn't figure out how to get USPS shipping assistant works in Wine. I have Wine 1.3.28 installed in Linux Mint 12. I get mono 28, dotnet 2.0, ie7 and vc++ installed. When I run the USPS application I still got some errors like below. Could anyone point out which is missing here? I google the
2010 Aug 25
3
frequency, count rows, data for heat map
Hi all, I have read posts of heat map creation but I am one step prior -- Here is what I am trying to do and wonder if you have any tips? We are trying to map sequence reads from tumors to viral genomes. Example input file : 111 abc 111 sdf 111 xyz 1079 abc 1079 xyz 1079 xyz 5576 abc 5576 sdf 5576 sdf How may xyz's are there for 1079 and 111? How many abc's, etc?
2014 Jun 20
1
iostat results for multi path disks
Here is a sample of running iostat on a server that has a LUN from a SAN with multiple paths. I am specifying a device list that just grabs the bits related to the multi path device: $ iostat -dxkt 1 2 sdf sdg sdh sdi dm-7 dm-8 dm-9 Linux 2.6.18-371.8.1.el5 (db21b.den.sans.org) 06/20/2014 Time: 02:30:23 PM Device: rrqm/s wrqm/s r/s w/s rkB/s wkB/s avgrq-sz avgqu-sz await
2007 Dec 04
1
SD cards
Hi, I am trying to read a 4gb SD HD card class 6 [hispeed], and Centos 5.1 does not recognize it. with dmesg|less I get [1616752.815569] sdf: Mode Sense: 00 00 00 00 [1616752.815571] sdf: assuming drive cache: write through [1616754.813229] sdf : READ CAPACITY failed. [1616754.813231] sdf : status=0, message=00, host=1, driver=00 [1616754.813240] sdf : sense not available. When I connect
2024 May 12
1
New Lemmy federated community for everything Samba (Unofficial)
Hello all, I have taken the liberty of creating a new Samba software community over on Lemmy. I realize that mailing lists are the traditional way projects communicate but I wanted a place more public and easier to use. For those who do not know, Lemmy is a federated forms platform. Here are the links to the community: Lemmy form: !sambasoftware at lemmy.sdf.org lemmy,sdf.org:
2012 Jan 22
1
Problem with sapa package and spectral density function (SDF)
Hi everybody, I'm a beginner R user and I'm trying to use the package "sapa" to estimate the spectral density function of several time series using the SDF function. For each time series, I want to calculate the density function at two temporal resolutions (daily and monthly). The monthly values calculated as a mean of the daily values. I first create a ts object for both series
2012 Jan 26
2
Calculate a function repeatedly over sections of a ts object
Hi, I want to apply a function (in my case SDF; package ?sapa?) repeatedly over discrete sections of a daily time series object by sliding a time window of constant length (e.g. 10 consecutive years or 1825 days) over the entire ts at increments of 1 time unit (e.g. 1 year or 365 days). So for example, the first SDF would be calculated for the daily values of my variable recorded between years 1
2018 Jan 31
1
Problems with "predict" function
Hello, I am synthesising some sales data over a twelve month period, and then trying to use the "predict" function, firstly to generate a thirteenth month forecast with upper and lower 95% confidence limits. So far so good But what I then want to do is add the upper sales value at the 95th confidence limit to the vector of thirteen months and their respective sales to create a
2007 Dec 07
0
SQLiteDF SQLITE ERROR after attach
Dear list, i have installed SQLiteDF (and SQlite 3.5.3 too) After the suggested dataframe generation iris.sdf <- sqlite.data.frame(iris) i have close R and than restart it for verify the correct load of dataframe : the file data1 is saved in the usual folder .SQLiteDF after the command : attachSdf("c:/R/Report/.SQLiteDF/data1.db","iris.sdf") R give this error
2018 Aug 13
1
vector arithmetic
I'm looking for where in the source recycling and vector multiplication+addition are defined. I see some stuff in ~/src/main/arithmetic.c. Is there anywhere else I should be looking as well? Cheers -- isomorphisms at sdf.org SDF Public Access UNIX System - http://sdf.org
2011 Mar 11
0
is gzcon w/ urls not implemented or used differently on linux?
I wrote some code which reads a gzipped text file directly from the web with gzcon(url()) and it works perfectly on OSX, but I cannot get it to work on linux at all, trying several different R versions and linux distributions. Any ideas? Here's an example of my code: z <- gzcon(url("ftp://ftp-private.ncbi.nlm.nih.gov/pubchem/.fetch/8897497837079742771.sdf.gz")) sdf <-
2009 Jan 13
2
mounted.ocfs2 -f return Unknown: Bad magic number in inode
Hello, I have installed ocfs2 without problem and use it for a RAC10gR2. Only Clusterware files are ocfs2 type. multipath is also used. When I issue : mounted.ocfs2 -f I have a strange result: Device FS Nodes /dev/sda ocfs2 Unknown: Bad magic number in inode /dev/sda1 ocfs2 pocrhel2, pocrhel1 /dev/sdb ocfs2 Not mounted /dev/sdf
2008 Aug 07
1
rsync: hlink.c:271: check_prior: Assertion `node->data != ((void *)0)' failed.
BLS #rsync --version rsync version 3.0.4pre2 protocol version 30 Copyright (C) 1996-2008 by Andrew Tridgell, Wayne Davison, and others. Web site: http://rsync.samba.org/ Capabilities: 64-bit files, 64-bit inums, 32-bit timestamps, 64-bit long ints, socketpairs, hardlinks, symlinks, IPv6, batchfiles, inplace, append, ACLs, xattrs, iconv, symtimes rsync comes with ABSOLUTELY NO
2012 Mar 23
2
btrfs crash after disk reconnect
Observed on Linux 3.2.9 after the controller/disk flaked in-out. (The world still needs a SCSI error decoding tool to tell normal people what cmd and res are about.) [ 157.732885] device label srv devid 4 transid 11292 /dev/sdf [ 157.733201] btrfs: disk space caching is enabled [ 172.936515] device label srv devid 4 transid 11292 /dev/sdf [44106.091461] ata4.01: exception Emask 0x0 SAct 0x0
2011 Feb 18
1
How to fsck.ocfs2
-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi everyone, simple question: how can I execute a "fsck.ocfs2 /dev/sdf"? All I get is - ---snip--- myhost:~ # fsck.ocfs2 /dev/sdf fsck.ocfs2 1.4.3 Checking OCFS2 filesystem in /dev/sdf: Label: SAP01 UUID: 5969C8CABB854F8EA9C17B5B8DE48EC6 Number of blocks: 183500800 Block size: 4096 Number of
2013 Sep 04
2
Error Attaching Seventh VirtIO-SCSI Device to Guest
I have run into a problem attempting to attach the seventh virtio-scsi device to a RHEL 6.4 Guest from a RHEL 6.4 host running libvirt version 0.10.2-18. I have a guest that is running RHEL6.4 where I can attach disks sda(boot), sdb, sdc, sdd, sde and sdf but when I try to attach sdg the virsh attach-disk command fails with the error: error: Failed to attach disk error: internal error Unable to
2010 Sep 13
3
Proper procedure when device names have changed
I am running zfs-fuse on an Ubuntu 10.04 box. I have a dual mirrored pool: mirror sdd sde mirror sdf sdg Recently the device names shifted on my box and the devices are now sdc sdd sde and sdf. The pool is of course very unhappy about the mirrors are no longer matched up and one device is "missing". What is the proper procedure to deal with this? -brian -- This message posted from