similar to: duplicate export entries in NAMESPACE

I think it would be a good idea. Several versions of the survival package had a duplicate line in the S3methods, and were missing a line that should have been there, due to a cut/paste error. Terry T. On 03/13/2013 06:00 AM, r-devel-request at r-project.org wrote: > Circa 80 CRAN and core-R packages have duplicate export entries in their NAMESPACE files. E.g., > bit 1.1.9 :

Dear all, I have defined a generic as.ff(x, ...) and a method as.ff.function(x, ...) which converts a standard R function x into a chunked version operating on large ff objects. Everything works fine, but when registering S3method("as.ff",function) in NAMESPACE, the installation fails with some kind of parsing error: adding build stamp to DESCRIPTION installing NAMESPACE file

parseNamespaceFile() doesn't seem to detect misspelled directives. Looking at its code I see switch(as.character(e[[1L]]), <lots of args omitted here>, stop(gettextf("unknown namespace directive: %s", deparse(e)), call. = FALSE, domain = NA)) but this doesn't seem to function as I expect, viz. to stop with an error if I type a wrong directive.

I am cleaning up the rms package to not export functions not to be called directly by users. rms uses generic functions defined in other packages. For example there is a latex method in the Hmisc package, and rms has a latex method for objects of class "anova.rms" so there are anova.rms and latex.anova.rms functions in rms. I use:

I have updated the rms package to extensively use NAMESPACE. I cannot get certain S3 methods to dispatch. For example I have in NAMESPACE S3method(anova, rms) S3method(latex, anova.rms) anova.rms produces an object of class "anova.rms" and there is a latex.anova.rms function in rms. But when I do latex(anova(fit)) I get an invocation of latex.default. I have tried using

I have defined boolean methods for bit and bitwhich objects, for example |.bit <- function(e1,e2) and |.bitwhich <- function(e1,e2) Both methods coerce their arguments to the respective class, however if I do something like bit_obj | bitwhich_obj then I get a warning Warning message: Incompatible methods ("|.bit", "|.bitwhich") for "|" and none of the

Hi, Could R-Core consider adding 'RtangleRuncode' and 'RtangleFinish' to the exports of utils. Their weave equivalent 'makeRweaveLatexCodeRunner' and ?'RweaveLatexFinish' are exported, as well as the other tangle utility functions 'RtangleSetup' and 'RtangleWritedoc'. The rationale is not just symmetry. ;-) I'm finishing a small package that

I find system.file() handy for writing examples, but if the user mistypes its arguments or if a package is not up to date its return value of "" can lead to trouble. This forces the example to be wordier than I'd like. E.g., the following example works > scan(what="", sep="\n", system.file("DESCRIPTION")) Read 9 items [1] "Package:

Hi, I was trying to get a list of S3 method for a given generic, along with the package in which they are defined, and I came across what looks like an issue in the data.frame returned in attribute 'info'. The column 'from' mostly gets the value "registered S3method for ..." except for visible methods. Is this the expected behavior? See code and output below. Thank you.

Hi, I received a bug report from a French user who told me there was something wrong with the function packageVersion(), but packageDescription() worked well. Below is the session info; I'm not sure if other French users can reproduce the error message: > packageVersion('base') Erreur : sp?cification de version incorrecte base > sessionInfo() R version 2.12.1 (2010-12-16)

I'm running R 2.11.1 on 64 bit Debian. I've had no problem installing any other CRAN packages, but installing package "gbm" fails due to: *** installing help indices ** building package indices ... ** testing if installed package can be loaded Error : .onAttach failed in attachNamespace() for 'gbm', details: call: NULL error: 'packageVersion' is not an

R-exts.pdf discribes S3method a little bit. But I want to understand more on how it is called, implemented and when to use it. I don't find it in an R session. But I see S3method() in some NAMESPACE files. > S3method Error: object 'S3method' not found > ?S3method No documentation for 'S3method' in specified packages and libraries: you could try '??S3method' I

I am writing my first R package, and I have been getting the following series of errors when I run R CMD check: * checking S3 generic/method consistency ... WARNING Error: package/namespace load failed for 'REEMtree' Call sequence: 2: stop(gettextf("package/namespace load failed for '%s'", libraryPkgName(package)), call. = FALSE, domain = NA) 1: library(package,

Matthew Dowle wrote: > Hi, > > Try package 'data.table'. It has a concept of keys which allows you to do > exactly that. > > http://datatable.r-forge.r-project.org/ > > Matthew > > Hi Matthew, Unfortunately, the load of that library fails (it builds successfully). I'm currently looking into why. Error output looks something similar to: >

On 07/07/2015 02:05 AM, Renaud Gaujoux wrote: > Hi, > > from the man page ?methods, I expected to be able to build pairs > (class,package) for a given S3 method, e.g., print, using > > attr(methods(print), 'info'). > > However all the methods, except the ones defined in base or S4 > methods, get the 'from' value "registered S3method for print",

Thanks Kevin, this indeed clarifies a bit the S3 method registration universe. On 8 July 2015 at 15:48, Kevin Wright <kw.stat at gmail.com> wrote: > Not sure if this answers your question, but you can't unregister a method. See > > http://tolstoy.newcastle.edu.au/R/help/06/07/30791.html > > Kevin Wright > > > On Wed, Jul 8, 2015 at 5:09 AM, Renaud Gaujoux >

[Env: R 2.11.1, Win Xp, using Eclipse/StatET] In a package I'm working on, I want to create as.matrix() and as.array() methods for a particular kind of object (log odds ratios). These are returned in a loddsratio object as the $coefficients component, a vector, but really reflect an underlying (R-1)x(C-1)xstrata array, whose attributes are contained in other components. I define coef,

Hi, from the man page ?methods, I expected to be able to build pairs (class,package) for a given S3 method, e.g., print, using attr(methods(print), 'info'). However all the methods, except the ones defined in base or S4 methods, get the 'from' value "registered S3method for print", instead of the actual package name (see below for the first rows). Is this normal

I apologize in advance for not having done more homework in advance, but thought I would send this along to see if anyone else was seeing this. I am having some sort of ggplot2/plyr/very-recent-R-devel dependency issues. Just installed R Under development (unstable) (2014-09-01 r66509) -- "Unsuffered Consequences" from source. > packageVersion("ggplot2") [1]

Hello, I try to set up namespaces for packages. It is fine for several of them, except one whose compilation fails (under Windows XP & R 2.0.0): ---------- Making package svViews ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata Error in parse(file, n, text, prompt) : syntax error on line 21 Execution halted make[2]: *** [nmspace] Error 1 make[1]: ***