similar to: Printing warning messages around R_tryEval

? Sun, 23 Apr 2023 13:33:16 -0400 Laurent Gautier <lgautier at gmail.com> ?????: > When tracing what happens during an error I found that > verrorcall_dflt() in src/main/errors.c calls PrintWarnings(). That > function is not part of R's C-API though. I've tried reading the source code and came to a similar conclusion. PrintWarnings() is required for warnings() to work

Hi, I have an embedded R, with the evaluation of expressions happening over time during the lifespan of the process. I tried either `R_eval()` and `R_tryEval()` for the evaluation. The issue I have is that the processing of warnings does not happen until the process exits and/or R is shut down. Evaluating `warnings()` returns NULL (NILSXP). It seems like the warnings are stuck in a list out of

...at least I think that is what happens, at least on some configurations. Here's a repeatable example: cd R_HOME/tests/Embedding touch tmp.R make tryEval and then (correct) > ./tryEval --slave Error in sqrt("") : Non-numeric argument to mathematical function Caught an error calling sqrt(). Try again with a different argument. [1] 3 versus (non-interactive; no return) >

Hi, I downloaded 2.8.1 and tried to compile it using gcc 3.4.6. (simple install, just ./configure, make, make check, make install) I found that it compiled and went through the tests fine. The foreign library, however, that seems to be segfaulting on me (see output below). I did see an old posting about a similar problem, but there was no resolution. Have other people experienced this at all?

Hello, I'm trying to install KEGGSOAP with bioconductor but i'm facing this problem: /> biocLite("KEGGSOAP") BioC_mirror: http://bioconductor.org Using R version 2.15, BiocInstaller version 1.4.4. Installing package(s) 'KEGGSOAP' trying URL 'http://www.bioconductor.org/packages/2.10/bioc/src/contrib/KEGGSOAP_1.30.0.tar.gz' Content type

R Help List: Just curious if anyone has successfully built R on a SPARC platform running Sun Solaris 10 using the latest Sun Studio 12 set of compilers. If so, I would be interested in the compile flags that you used. I have tried several different builds of version 2.5.1, 2.6.0, and 2.6.1 using various different compile flags and I am able to compile and check, but for whatever reason, the

Hi, The C function PrintWarnings is currently not in the C API, but it is declared non static in the svn trunk as of revision 53110 . As this is the only function that creates the last.warning object used by the R function warnings(), I think it would be useful for programs that embed R to be able to call it. So, will it remain non static, that is callable although it's not declared in the

Is there any way to distinguish between an error and a user interruption in R_tryEval? In both cases the ErrorOccurred argument is set to 1. For my application I need a different action in case of a SIGINT. >From the source code I infer that R_tryEval basically wraps eval in R_ToplevelExec, which returns TRUE if fun returns normally, FALSE if it results in a jump to top level. However both an

Hello. I'm currently working on the OCaml-R binding allowing to call R code from Objective Caml. As Objective Caml is a functional language, I'd like the binding to be as 'functional' as possible. Specifically, this means that I'd like using the R_tryEval function and all related entry points in libR.so. I've had a look at R-exts.pdf, but R_tryEval is not documented.

I have an lapply function call that I want to parallelize. Below is a very simplified version of the code: url_base <- "https://cloud.r-project.org/src/contrib/" files <- c("A3_1.0.0.tar.gz", "ABC.RAP_0.9.0.tar.gz") res <- parallel::mclapply(files, function(s) download.file(paste0(url_base, s), s)) Instead of download a couple of files in parallel, I get a

Full_Name: Byron Ellis Version: 2.4.1 OS: N/A Submission from: (NULL) (75.55.126.10) R_tryEval is implied to be in the public API by 'Embedding R in Other Applications,' but not documented in 'Writing R Extensions.' This would seem to be an oversight given the dependence of many applications including but not limited to the official OS X GUI on this function.

Hello, When using R_tryEval (from JRI in my case), is there a way to setup error recovery strategy and more generally calling handlers. From my reading of context.c, R_tryEval calls R_ToplevelExec which creates a context like this: begincontext(&thiscontext, CTXT_TOPLEVEL, R_NilValue, R_GlobalEnv, R_BaseEnv, R_NilValue, R_NilValue); so I guess what I am trying to do is add

On Thu, 22 Feb 2007, ellis at stat.harvard.edu wrote: > Full_Name: Byron Ellis > Version: 2.4.1 > OS: N/A > Submission from: (NULL) (75.55.126.10) > > > R_tryEval is implied to be in the public API by 'Embedding R in Other > Applications,' but not documented in 'Writing R Extensions.' This would seem to > be an oversight given the dependence of many

It's been a few days I cannot compile to get R-2.12.0 working at sparc Solaris 10. Seems the R software installation is OK, but the recommended package called Matrix stopped me, since I can finish the installation with the configure option -with-recommended-packages=no. I then run Ø Install.packages("Matrix") Then last few lines of output are the following, 28: tryCatch(expr,

Hi, R_tryEval, exported in Rinternals.h but not part of the API, is currently defined as: R_tryEval(SEXP e, SEXP env, int *ErrorOccurred); I'm trying to embed R in an application (basically yet another GUI), and this has been very helpful to catch errors. It would be even more helpful if it also gave access to the visibility flag. I can wrap this in a call to withVisible, and that works

Hello, I try to install pbdMPI. Compilation successful, but load fails with segfault. Is anyone can help me? R version 3.0.0 pbdMPI version 0.1-6 Intel compiler version 13.1.1 OpenMPI version 1.6.4-1 CPU Intel x86_64 # R CMD INSTALL pbdMPI_0.1-6.tar.gz .. .... checking for gcc... icc -std=gnu99 checking whether the C compiler works... yes checking for C compiler default output file name...

Hello all, (Thank for your reply) I have a web-application in Apache Tomcat, when i start R in this application, I used packe RSJava Code ROmegahatInterpreter interp; String [] rargs = {"--no-save"}; REvaluator e; interp = new ROmegahatInterpreter ( ROmegahatInterpreter.fixArgs(rargs),false ); e =new REvaluator (); Errors ================ R version 2.10.1 (2009-12-14)

I have an R program I am attempting to use to generate some SVGs. I've been using the cairoDevice library. When running a session not connected to an X session (like if I'm sshed in), attempting "library(cairoDevice)" causes: *** caught segfault *** address 0x8, cause 'memory not mapped' Traceback: 1: .C("R_gtk_setEventHandler", PACKAGE =

Dear R List, I encountered a serious problem regarding the registration of ".C" when following the documentation "Writing R Extensions" that leads to a segmentation fault (tested on windows and mac os x). The registration mechanism for ".C" routines via R_registerRoutines and the R_CMethodDef structure has been enhanced recently with the addition of two fields, one

I got the following after running succesfully through this loop 28 million times... the loop opens text files in a directory and inserts line by line into a database... *** caught segfault *** address 0xc0000010, cause 'memory not mapped' Traceback: 1: .getGeneric(f, where, package) 2: getGeneric("coerce", where = where) 3: as(obj, "integer") 4: