similar to: make a list with names with s/lapply

Hello, I wish to count how often zero (0) appears in the vector test. test [1] 1 1 1 1 1 1 2 1 1 1 0 2 0 1 1 0 0 0 1 1 1 0 1 2 1 1 1 1 1 1 I think of something like ... > sapply (test, function (x) if (x==0 ... ... but actually I dont know how to carry on. Could anybody give me a hint? Thanks Hermann [[alternative HTML version deleted]]

Hello, I have a vector (numeric) v-> c(a,b,c,d,e) and I want to create the vector n->c(b-a,c-b,d-c,e-d). How can I do that? Thank you Hermann [[alternative HTML version deleted]]

Hello, I would like to transform a character vector into a "binary" vector ("keine" and " " become 0 and the rest 1). > dput (scm) c("keine", " ", "keine", "Erstgradverw.", "Mutter", "Erstgradverw.", "Erstgradverw.", "keine", " ", "Vater",

To whom it may concern. As I would like to analyse some array data I was keen on downloading the lumi package that depends obviously on hdrcde that is not available for r 2.12.1. I did not find instructions to solve or circumvent this problem. Installing hdrcde by hand did not work either. It was not detected by > (.packages(all.available=TRUE)) if installed in the R library. Thanks Hermann

Hello, I did a pca with over 200000 snps for 340 observations (ids). If I plot the eigenvectors (called rotation in prcomp) 2,3 and 4 (e.g. plot (rotation[,2]) I see a strange "column" in my data (see attachment). I suggest it is an artefact (but of what?). Suggestion: I used prcomp this way: prcomp (mat), where mat is a matrix with the column means already substracted followed by a

Hello, I have a list with gene names, fold changes (=expression level) and chromosomes. Names fold change chromosome hz 1.5 2 If I plot fold change versus chromosome (or vice versa): plot (ch, fc) I see only the chromosomes with numbers but not those with letter (x and y). What can I do? A second question: How can I add a single line in that plot at a certain

Hello, having a data frame like test with pairs of characters I would like to create chains. For instance from the pairs A/B and B/I you get the vector A B I. It is like jumping from one pair to the next related pair. So for my example test you should get: A B F G H I C F I K D L M N O P > test V1 V2 1 A B 2 A F 3 A G 4 A H 5 B F 6 B I 7 C F 8 C I 9 C K 10 D L

Hello, I have start and end coordinates from different experiments (DNase hypersensitivity data) and now I would like to combine overlapping intervals. For instance (see my test data below) (2) 30-52 and (3) 49-101 are combined to 30-101. But 49-101 and 70-103 would not be combined because they are on different chromosomes (chr a and chr b). Does anybody have an idea? Thanks Hermann > df

Dear list, I wish to plot chromatin precipitation data: I would like to have a rectangles (x:end-start, y:peak) but I do not have an idea how to define x (in terms of qplot syntax) and to choose the correct geom. mydata is a subset of a larger file. > mydata chrom start end peak 1 chr11 5291000 5291926 8 2 chr11 10988025 10988526 7 3 chr11 11767950 11768676 8 4

Hello, my data is sorted by start.ens (see below). And now I would like to extract all rows (so called* defined row*s) with type==Expression - subset (df, type==Expression) - and the aforegoing type==DNase HS (which is not necessarly row n-1 - assumung that the defined row is n). I dont know how to add this to my subset command. Is that possible? Thanks Hermann > df start.ens fc.trans

Dear list, I have a problem with defining a function (see below) to read my testfile (see testfile). My function only returns mydata I wish to work with attr(mydata, 'fc') as well (for labelling a plot). Principally it works if I do not insist on this function but it would be much easer if it is possible to return mydata AND attr(mydata, 'fc') by using a function. 1) testfile:

Sorry, it seems I have only replied to Lakhdar, not to the newsgroup. Below is my reply to Lakhdar, and I would like to make it more clear now, using some pseudo values for simplicity: I read bytes 1 to 124 from my encoded spx file. I decode themt and get the values: ---Frame 1---- -293 -8234 2134 17 ---Frame 2---- -9323 -732 189 2329 Both frames are just perfect as I need them. But now when I

I found out something: The more frames I decode before the frame that I actually want to decode, the better the quality becomes. For example when I basically want to decode frame #100, I read frame #80 to #100, and then frame 100 has the quality that I need. Why? Is there any information on this behaviour? Thank you. Hermann Am 23.12.2011 18:37, schrieb Hermann Weber: > It would be nice

My file is 3 hours long, so decoding takes around 5 minutes on an average computer. That is a bit too long unfortunately... Am 23.12.2011 20:38, schrieb Steve Checkoway: > On Dec 23, 2011, at 10:54, Hermann Weber<hermie.weber at gmx.de> wrote: > >> And how many frames does Speex need to "recover"? >> Or is that not predictable? > No idea. My guess is not

And how many frames does Speex need to "recover"? Or is that not predictable? Greetings, Hermann Am 23.12.2011 19:17, schrieb Steve Checkoway: > > On Dec 23, 2011, at 10:03 , Hermann Weber wrote: > >> I found out something: >> >> The more frames I decode before the frame that I actually want to >> decode, the better the quality becomes. >> For

Dear Nikos, thanks! But you use Opus only for resampling, not for entirely replacing Speex, don't you? Greetings! Hermie Am 07.05.2013 22:53, schrieb Nikos Chantziaras: > The Opus resampler is actually a bugfixed version of the Speex one. Same > interface/API, but with the bugs removed. It's why I recommended it :-) > Otherwise I would have recommended something entirely

Hello, I have a samba 1.9.18p4 server running as a domain master browser on a subnet, with some clients distributed on other subnets. If there are only Win 95 clients on a subnet, browse sync works - but not if there are Win NT 4.0 SP3 machines on that subnet. Error from nmdb (at log level 3): sync_with_lmb: Initiating sync with local master browser MAILHEIDELBERG<0x20> at IP

Hello! I encoded a voice file (48kHz) with opusbin\opusenc.exe with the standard settings and decoded it. The output was amazing. I could not hear any loss at all. Then i encoded the same file with opus_demo.exe and standard settings and then decoded it. The output had a sizzling noise, even when I used full bandwidth. I think I have played around with any of the settings in opus_demo.exe,

Hello all, I'm trying to prevent answering a channel when a queue is either full or has no members. It seems I'm forced to answer a call before I call Queue() or else the audio is in the early media (which is unacceptable because of the short duration of early media on ISDN). Is there any way to let Queue() automatically answer a channel if the call is going to be placed in the

hi i have a question. is there an easy way to remember transfered files to a specific destination host. little example: 1) host A: with files a, b, c 2) rsync-transfer them to host B 3) add a new file d to host A 4) delete file c from host B 5) again a rsync transfer, but file c get skipped, d get transferred maybe as a feature request: add an check for an extended attribut of the files which