Displaying 20 results from an estimated 10000 matches similar to: "Declaring/importing non-exported functions [car] in another package"
2008 Oct 29
2
sessionInfo() error
[Using R 2.7.2 on Windows XP]
After re-building our heplots package, I've begun to get the following
error from sessionInfo(),
even though it passes R CMD check and builds without errors:
> sessionInfo()
Error in x$Priority : $ operator is invalid for atomic vectors
In addition: Warning message:
In FUN(c("MASS", "heplots", "car", "rgl",
2012 Jun 06
1
stumped on re-building package vignette
[Env: Win Xp / StatET 2.0 / R 2.15.0]
In my heplots package I extended the HE-examples.Rnw vignette under
inst/doc. The package passes R CMD check
on my machine:
* using log directory 'C:/eclipse-3.7/heplots.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: i386-pc-mingw32 (32-bit)
...
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files
2010 Feb 10
1
heplot3d / rgl : example causes R GUI to crash
[Env: Tested under Win Xp, R 2.9.2 and R 2.10.1; sessionInfo() at end]
I've run into a problem with the heplot3d() function in my heplots
package which causes the R GUI to crash
('R for Windows GUI encountered a problem and needs to close...'). I
think the problem comes from an
rgl call, but, I can't get a traceback or other information because my R
session crashes. I've
2010 Jul 29
0
[R-pkgs] heplots 0.9-3 and candisc 0.5-18 released to CRAN
I've just released the latest R-Forge versions of heplots 0.9-3 and
candisc 0.5-18 to CRAN.
They should appear there within a day or two.
== heplots
The heplots package provides functions for visualizing hypothesis tests
in multivariate linear models (MANOVA, multivariate multiple regression,
MANCOVA, etc.). They
represent sums-of-squares-and-products matrices for linear hypotheses
and for
2013 Mar 29
3
weird error with a lazyload .RData file in a package
I added a new data file, NLSY.RData, to a package that uses LazyData: Yes
It passed R CRAN check and R CMD install worked w/o significant complaints.
* installing to library 'C:/R/R-2.15.2/library'
* installing *source* package 'heplots' ...
** R
** data
** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
Warning: package 'nnet' was
2012 May 03
1
bwplot: using a numeric variable to position boxplots
[Env: R 2.14.2 / Win Xp]
In the examples below, I'm using lattice::bwplot to plot boxplots of 4
variables, grouped by a factor 'epoch'
which also corresponds to a numeric year. I'd like to modify the plots
to position the boxplots according to
the numeric value of year, but I can't figure out how to do this.
Also, I'd to modify the strip labels that give the variable
2008 Dec 10
1
trouble loading candisc
Hello,
I am having trouble loading the package candisc onto my R distribution. I am
using 2.7.1-2. I do a "> install.packages("candisc"
and get the following output.
Warning in install.packages("candisc") :
argument 'lib' is missing: using '/usr/local/lib/R/site-library'
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk
2012 May 10
2
setting global options for a package
This may be elementary, but I can't find an answer: How can I set up
global options for
some specific arguments to functions in a package which can be easily
changed by the user?
This question relates to the selection of colors used in functions in
several packages (heplots,
genridge), where I want to provide reasonable default values for plots,
but allow users to
change those defaults
2013 Apr 21
2
vignettes: problems with PDF compaction
[Env: OS: Win Xp; R 2.15.2; IDE: eclipse/StatET]
Each time I update my heplots package, I get warnings from R CMD check
on R-Forge,
* checking sizes of PDF files under ?inst/doc? ... WARNING
?gs+qpdf? made some significant size reductions:
compacted ?HE-examples.pdf? from 739Kb to 366Kb
and upon submission to CRAN, a message from maintainers:
On CRAN now: but again there were warnings
2013 Sep 12
6
declaring package dependencies
I received the following email note re: the vcdExtra package
> A vcd update has shown that packages TIMP and vcdExtra are not
> declaring their dependence on colorspace/MASS: see
>
> http://cran.r-project.org/web/checks/check_results_vcdExtra.html
But, I can't see what to do to avoid this, nor understand what has
changed in R devel.
Sure enough, CRAN now reports errors in
2008 Nov 17
1
CITATION file with multiple citEntry(): no BibTeX produced by citation()
[Using R 2.8.0 / Win XP / ]
I just added a CITATION file to the heplots package--- appended below.
From the document ion for ?CITATION, there can be *one or more* calls to
citEntry() within the CITATION file, and each should produce an object
of class "citation".
With just a single citEntry(), citation produces the expected output,
with BibTeX entry:
>
2011 Sep 13
1
using vif from package "car" - "aliased coefficients in the model"
Hello!
I have run a simple regression - lm and created a regression object "myreg".
I can see all the coefficients when I print(myreg).
Then I tried to run vif(myreg) from the package "car".
However, it's giving me an error: in vif.lm(regr.f) : there are
aliased coefficients in the model
Very sorry for my question: Is there any way to get the vif's for all
predictors?
2018 Mar 13
2
importing namespaces from base packages
On Mon, Mar 12, 2018 at 2:18 PM, Martin Maechler <maechler at stat.math.ethz.ch>
wrote:
> [...]
> Is that so? Not according to my reading of the 'Writing R
> Extensions' manual, nor according to what I have been doing in
> all of my packages for ca. 2 years:
>
> The rule I have in my mind is
>
> 1) NAMESPACE Import(s|From) \
>
2012 Mar 18
1
Namespace dependency not required
Hi,
I am working at adding namespace to my packages, carefully following the
doc "Writing R extensions" and some threads on the web. However I cannot
find clear explanation about how to best deal with the import or
importFrom functions in the name space. To make it short:
To declare dependencies in the description file either after Depends:
(packages including functions that are
2015 Aug 26
2
declaring dependencies of shiny app in inst/
Dear all,
I have a package implementing a shiny app, putting the R code of the app (server.R and ui.R) in inst/... and then having a simple function merely starting the app with something along the lines of:
runApp(system.file("inst/..."))
However, the app itself uses functions from packages which are not used elsewhere in the code. What is the best way to declare these dependencies
2011 Apr 13
3
latex, eps graphics and transparent colors
I have a diagram to be included in latex, where all my figures are .eps
graphics (so pdflatex is not an
option) and I want to achieve something
like the following: three concentric filled circles varying in lightness
or saturation. It is easiest to do this using
transparency, but in my test using the postscript driver, the
transparent color fills do not appear. Is it
correct that postscript()
2018 Mar 09
2
importing namespaces from base packages
Dear All,
I understand the R CMD checks with only the base package attached,
everything else (including the other packages bundled with the base R)
should be imported and most importantly declared in the Imports field from
the DESCRIPTION file.
However, I do use functions from other packages than base (utils,
grDevices, stats, graphics), for which it is sufficient to declare
importFrom() in the
2008 Oct 05
1
building packages: "R Help for package foo" vs. "HTML Help"?
In building a package, what are the settings in the package files or the
build commands that
determine whether the compiled HTML help windows have the window title
"R Help for package foo" vs. "HTML Help"?
I often have quite a few help files active, and it is much more
convenient to navigate among
them if the window has an informative title.
If this is simple to test for in
2010 Aug 10
1
influence measures for multivariate linear models
Barrett & Ling, JASA, 1992, v.87(417), pp184-191 define general classes
of influence measures for multivariate
regression models, including analogs of Cook's D, Andrews & Pregibon
COVRATIO, etc. As in univariate
response models, these are based on leverage and residuals based on
omitting one (or more) observations at
a time and refitting, although, in the univariate case, the
2012 Feb 09
1
passing an extra argument to an S3 generic
I'm trying to write some functions extending influence measures to
multivariate linear models and also
allow subsets of size m>=1 to be considered for deletion diagnostics.
I'd like these to work roughly parallel
to those functions for the univariate lm where only single case deletion
(m=1) diagnostics are considered.
Corresponding to stats::hatvalues.lm, the S3 method for class