similar to: How to call Java main method using rJava package?

Hi list, I'm wanting to use a matrix as input to some java code, but I seem to be unable to do this (See code below). When searching online for a solution I found that rJava 0.5-2 (the version under development not yet in CRAN) is adding "direct support for raw vectors as method parameters". Is this related? I also tried to use .jarray / .jcast in various combinations to no avail.

After some trial and error I figured out how to pass matrices from R to java and back using rJava, but this method is not documented and I wonder if there is a better way? Anyway, here is what I found works: (m = matrix(as.double(1:12),3,4)) [shows m as you would expect] jtest <- .jnew("JTest") (v <- .jcall(jtest, '[[D], 'myfunc', .jarray(m), evalArray=FALSE)) [shows

Dear all, thank you for your hints. I would prefer to do not use Rserve as Dirk mentioned. @Simon I have full control over the Java implementation - I can adapt the code that I use for the communication R <-> Java. > You can natively access structures on each side. The fastest way is to > use R representation (column-oriented) in Java - that is much faster > than any kind of

I am desperate for help. I am trying to get the RJDBC and rJava .5to work on both my windows xp and linux Redhat EL5 Server. On both I get a ava.lang.ClassNotFoundException when calling JDBC(). My example is require(RJDBC) classPath='C:\\libraries\\mysql-connector-java-5.1.3-rc\\mysql-connector-java-5.1.3-rc-bin.jar' driverClass=c("com.mysql.jdbc.Driver") drv <-

Dear All, I'd like to use Weka functions that are not implemented (do not have interface) in RWeka, like the Remove function and others in the future! The .java() functionality is for that purpose but I haven't seen any example with Weka functions. Could anyone give me hand in how to do it? For instace if I want to use the weka.filters.unsupervised.attribute.Remove? 1. in the R console,

I'm writing a package that successfully calls Java from R using rJava. When R sends my Java function bad data (through .jcall()), I get the error message details (when I run it on a console) and then: Java requested System.exit(1), closing R. Is there a way to call .jcall so that when Java receives bad data, the Java function will exit, but won't take down R with it? Thanks, Sigal

Hola. En mi caso, no he podido resolver los problemas con el Java para usar XLConnect, que en los papeles me parece el mejor. Supongo que algo de la arquitectura del sistema o bien de la relación entre el Java, el R y el RStudio. Así que utilizo library(openxlsx) write.xlsx(datos, file = "EDA1.xlsx") #donde datos es el objeto que quiero guardar. Requiere instalar el RTools, según tipo y

I have been experiencing issues with an R script hanging when connecting to an Oracle database. To help debug, I found a function here in the nabble forum and made a small test script: #!/usr/bin/Rscript --no-restore --no-save --no-init-file library("RJDBC") drv<-JDBC("oracle.jdbc.OracleDriver","/home/oracle/lib/ojdbc6.jar", "'") dbCheck =

Hi, I have a MapReduce Java code, which I am calling from R using rJava. I have prepared the R package and tested that successfully. But when I deployed the package in a cluster and executed it, I am getting ClassNotFoundException. If I run the same job directly without integrating with R, it runs perfectly. Here is my R code: library(rJava) muMstSpark <- function(mesosMaster = NULL, input =

Bare test code: My simple Java test class source and R test code follow: public class RJavTest { public static void main(String[]args) { RJavTest rJavTest=new RJavTest(); } public final static String conStg="testString"; public final static double con0dbl=10000001; public final static double[]con1Arr=new double[] { 10001,10002,10003,10004,10005,10006 }; public final static

Buenos días a todos! Estoy trabajando con una base de datos que directamente he descargado de internet y después de prepararla un poco necesito exportarla a Excel he intentando con las dos opciones que mencionaré al final pero ninguna funciona, de qué otra manera puedo exportar esos datos a Excel... muchas gracias por su ayuda y pronta respuesta! 1) library(xlsx) library(rJava)

I haven't had time to try using R for over a year, but have a colleage who wants to. We work with time series and our current version of our calendar-time subroutines in java converts both directions between linear time and calendar. We have used calendar time since year 1965 starting out then with Fortran. Calendar time can be CnYrMoDa | CnYrMoDaHr | CnYrMoDaHrMn | CnYrMoDaHrMnSc |

Hi all! I recently tried to install the rJava package on my notebook (Debian Etch / Kernel 2.6.15 / jdk 1.5.0-5 / R 2.2.1 / rJava ?? the repo one, have a look below). I compiled R myself with "--with-readline=no" and "--enable-R-shlib flags". Now, each time loading the library rJava I encouter the same error. I reinstalled several times (as root), always the same problem:

Hi All, I have written a Java MapReduce code that runs on Hadoop. My intention is to create an R package which will call the Java code and execute the job. Hence, I have written a similar R function. But when I call this function from R terminal, the Hadoop job is not running. Its just printing few lines of warning messages and does nothing further. Here is the execution scenario: *>

Hello there, I want to create a string from strings and numbers, here is my code: str <- "name" & toString(20) but it returns me this error: Error in toString(20) : could not find function ".jcall" what did I do wrong? I couldn't find this error anywhere... -- View this message in context: http://n4.nabble.com/Error-with-toString-tp1290327p1290327.html Sent from

Hi Does rJava offer a way to instruct the JVM to perform a garbage collection? Regards Ben

Hi all, I downloaded and installed JGR. Then when I tried to load the package in R console, it generated the following error message: > local({pkg <- select.list(sort(.packages(all.available = TRUE))) + if(nchar(pkg)) library(pkg, character.only=TRUE)}) Loading required package: rJava using Java Runtime version 1.5.0 using JAVA_HOME = C:\Program Files\Java\jre1.5.0_01 Loading required

Hi, I am facing trouble when trying to read large xlsx file into R. please find the code and error below. The file I was trying to read has 36,500 rows X 188 col, ~ 37 MB size. > options( java.parameters = "-Xmx4g" ) > library(xlsx) Loading required package: xlsxjars Loading required package: rJava > cftc =

Hi, I want to save a RWeka model into a file, in order to retrive it latter with a load function. See this example: library(RWeka) NB <- make_Weka_classifier("weka/classifiers/bayes/NaiveBayes") model<-NB(formula,data=data,...) # does not run but you get the idea save(model,file="model.dat") # simple save R command # ... load("model.dat") # load the model

I am fairly new to R and would like help with the problem below. I am trying to sum and count several rows in the data frame yy below. All works well as in example 1. When I try to add the columns, with an NA in Q21, I get as NA as mySum. I would like NA to be treated as O, or igored. I wrote a function to try to count an NA element as 0, Example 3 function. It works with a few warnings,