similar to: two lines in axis title combined with 'substitute' command

Hi, I have a data.frame that looks something like this. feature 5637 ? ? ? ? ? ? ? ?1321N1 feature1 -0.568750616 -0.934748758 feature2 -0.913080902 -0.941455172 feature3 0.442477294 -0.257921866 I want to change it to look like this. feature ? ? ?cell.line ? ? value feature1 5637 -0.568750616 feature2 5637 -0.913080902 feature3 5637 0.442477294 feature1 1321N1

I am trying to find methods for testing and visualizing calibration to Cox models with time-depended coefficients. I have read this nice article <http://journals.sagepub.com/doi/10.1177/0962280213497434>. In this paper, we can fit three models: fit0 <- coxph(Surv(futime, status) ~ x1 + x2 + x3, data = data0) p <- log(predict(fit0, newdata = data1, type = "expected")) lp

Hi, I am having troubles with creating an eSet and would appreciate any help on the following problem. I am trying to create an eSet using the following code pd <- read.table(file="pdata.txt",header =TRUE,row.names=1); colnames(pd) <- c("type","tumor","time","id"); pdN <- list(type =

First, as others have said please obey the mailing list rules and turn of First, as others have said please obey the mailing list rules and turn off html, not everyone uses an html email client. Here is your code, formatted and with line numbers added. I also fixed one error: "y" should be "status". 1. fit0 <- coxph(Surv(futime, status) ~ x1 + x2 + x3, data = data0) 2. p

Hi, I wonder if anybody could help me in converting this easy SAS program into R. (I'm still trying to do that!) PROC IMPORT OUT= WORK.CHLA_italian DATAFILE= "C:\Documents and Settings\carleal\My Documents\REBECCA\stat\sas\All&nutrients.xls" DBMS=EXCEL2000 REPLACE; GETNAMES=YES; RUN; data chla_italian; set chla_italian;

Hello, I was relying on withTimeout (from R.utils) to help me stop nlme when it ?hangs?. However, recently this stopped working. I am pasting a reproducible example below: withTimeout should stop nlme after 10 seconds but in this example it does not. I tried this both on a linux (64 bit, CentOS 7, R 3.4.1, nlme 3.1-131 R.util 2.6) and mac (Sierra 10.13.1, R 3.4.2, same versions or nlme and

Hello, I was relying on withTimeout (from R.utils) to help me stop nlme when it ?hangs?. However, recently this stopped working. I am pasting a reproducible example below: withTimeout should stop nlme after 10 seconds but the code will generate data for which nlme does not converge (or takes too long) and withTimeout does not stop it. I tried this both on a linux (64 bit, CentOS 7, R 3.4.1,

Hello R-devel, I am currently attempting to implement an API similar to data.table wherein single bracket subsetting can accept an unquoted expression to be evaluated in the context of my object. A simple example from the data.table package looks like this: DT <- data.table(col1 = c('a', 'b', 'c'), col2 = c('x', 'y', 'z')) DT[col1 ==

Hello Guys, I'm using the package RankProduct to determine the differential expression of genes in 2 classes. The importance of the thing is to know: - How can I determine which class is the class of up-regulated genes and which to the down regulated gene - How can i interpret the results : $pfp, $RPs, $RPrank, Orirank,

Hi, This is a quiet a specific question, but i really need help. I'm using the flowCore package coming from BioConductor. No i would like to do a transformation, a log tranformation. Although i think i put everything like it should, i get this error: Error in log(x, logbase) : Non-numeric argument to mathematical function which looks like a general calculating problem. the code i use now

This message is in MIME format. The first part should be readable text, while the remaining parts are likely unreadable without MIME-aware tools. Send mail to mime@docserver.cac.washington.edu for more info. ---1678264062-154654637-1051422990=:2626055 Content-Type: TEXT/PLAIN; charset=US-ASCII ---1678264062-154654637-1051422990=:2626055 Content-Type: TEXT/PLAIN; charset=US-ASCII;

Hi, I downloaded 3.0.20 from samba.org, ran makepkg.sh to create samba pkg for Solaris. The install base for the new version locates in /opt/samba and the smbd locates in /etc/samba. I tried to modify the makepkg.sh to put everything under /usr/local/samba as follow: Delete: ==== --localstatedir=/var/lib/samba \ --with-piddir=/var/run \

Hi to all! I've set up Zimbra LDAP (2.4) as master, and I want to use RHEL v5 LDAP (2.3) as a slave. This is relevant part of my slapd.conf on LDAP 2.3: # syncrepl directives syncrepl rid=101 provider=ldap://192.168.1.86 bindmethod=simple binddn="uid=zimbra,cn=admins,cn=zimbra" credentials=PASSword searchbase="dc=company,dc=com" schemachecking=on

Hi Guys, We're trying to add a BDC in Samb4 classic domain setup. The Samba 3 How -To and Samb3 by Example covers this but uses the old slapd.conf option, we are using the slapd.d config. I couldn't find a similar document for Samba4 Can you please advise that the following steps will work? LDAP in the existing PDC is working using the smbldap tools - Setup the LDAP in BDC

Hello all, I am currently trying to connect a Samba server (running on CentOS 6.5) to a Windows 2008R2 AD domain (domain A), which itself has a two-way transitive forrest-trust to another Windows 2008R2 AD domain (domain B). The Samba server is joined to domain A and should be able to authticate users in domain B. Is this currently possible using some version of either Samba3 or Samba4 ? If so,