similar to: Question about contour3d and writeWebGL: rgl and misc3d package

So I wanted to export a contour3d object into VTK and it worked well enough, except the top of the ball (the contour) was missing. Example below, or gist here: https://gist.github.com/muschellij2/5126544 rm(list=ls()) require(misc3d) f <- function(x, y, z) x^2+y^2+z^2 x <- seq(-2,2,len=20) ball <- contour3d(f,4,x,x,x, draw=FALSE) drawScene.rgl(ball) ### get the triangles allids

I am looking for examples of how to plot with contour3d() to a PNG or PDF file, add axes and other elements to the isosurface plot, and use contour3d in conjunction with lattice. Regarding lattice, I'm not necessarily looking for conditioning on the data shown in the isosurface plots, just a way to show multiple plots in one figure and label them. I am new to the packages misc3d and rgl.

I'm making some 3D plots with contour3d from misc3d and wireframe from lattice. I want to view them from below; i.e. the negative z-axis. I can't figure out how to do so. I would like my point of view looking up from below, with the z, y, and x axes positive going away. Can anyone tell me the correct settings for screen to achieve this? Here is what I've found so far:

Hi the list, Using misc3d, we can export 3d dynamic graph in pdf format. Is it also possible to export these graph into a format that we can publish on the web? Christophe -- Christophe Genolini Maître de conférences en bio-statistique Vice président Communication interne et animation du campus Université Paris Ouest Nanterre La Défense [[alternative HTML version deleted]]

Hi, I have a question about exporting interactive 3D plots. I use the following code to plot a contour of a trivariate normal distribution: library(mvtnorm) library(rgl) library(misc3d) n=25 x=seq(-3,3,length=n) X=cbind(rep(x,each=n**2),rep(rep(x,each=n),n),rep(x,n**2)) p=array(dmvnorm(X,sigma=diag(3)*0.5+0.5),c(n,n,n)) contour3d(p,x,x,x,level=mean(p)) lim=c(-3,3)

The misc3d package provides a small collection of mostly rgl-based functions for 3D data: contour3d Uses rgl to render isosurfaces, or three-dimensional contours, computed by the marching cubes algorithm. image3d Crude 3d analog of image() using rgl to plot points on a three dimensional grid representing values in a three dimensional array. Assumes high

The misc3d package provides a small collection of mostly rgl-based functions for 3D data: contour3d Uses rgl to render isosurfaces, or three-dimensional contours, computed by the marching cubes algorithm. image3d Crude 3d analog of image() using rgl to plot points on a three dimensional grid representing values in a three dimensional array. Assumes high

Hey, Is there any function plotting several "implicit functions" (F(x,y)=0) on the same fig. Is there anyone who has an example code of how to do this? The contour3d function in the misc3d package only work with the functions with three dimensions. Thanks a lot. Many thanks for your help. KnifeBoot [[alternative HTML version deleted]]

Hi, Tried to install AnalyzeFMRI on Linux (FC-4) and got the following: > install.packages("AnalyzeFMRI") trying URL 'http://rh-mirror.linux.iastate.edu/CRAN/src/contrib/AnalyzeFMRI_1.1-4.tar.gz' Content type 'application/x-gzip' length 308066 bytes opened URL ================================================== downloaded 300Kb * Installing *source* package

Hello everybody, I would like to solve the problem described below in R (if possible). I am very new to R and have therefore no idea what to even look for in the docu. Therefore, if someone could tell me if this is possible in R and where I might find the respective docu then I would already be very thankful. I have a large set (a few million) of points in 3D. I would like to create a

Hi, The tkfilefind demo in the tcltk package doesn't seem to work for me in Windows2000. The demo script uses tkfilefind(".") which doesn't display the parent directory so you can't browse around the whole drive. Using tkfilefind() (which uses the default path getwd()) doesn't seem to work for me at all. I also tried tkfilefind("/") which worked fine but

Release 0.4-0 of package misc3d is now available from CRAN. This package provides a small collection of functions for 3D plotting, including 'contour3d' for computing and rendering 3D contours or isosurfaces and 'parametric3d' for rendering parameterized surfaces. A major change in this release is that rendering in standard and grid graphics is now supported in addition to rgl.

Release 0.4-0 of package misc3d is now available from CRAN. This package provides a small collection of functions for 3D plotting, including 'contour3d' for computing and rendering 3D contours or isosurfaces and 'parametric3d' for rendering parameterized surfaces. A major change in this release is that rendering in standard and grid graphics is now supported in addition to rgl.

Dear R users -- I think this question was asked before but there was no reply to it. I would appreciate any suggestion any of you might have. I am interested in plotting several "implicit functions" (F(x,y,z)=0) on the same fig. Is there anyone who has an example code of how to do this? Thank you Yihsu

Hi all, I've been using the 'rgl' package to visualise in 3d the water temperature recorded by a glider deployed off the coast of Australia (see snapshot attached). Using the writeWebGL function, I'm able to produce an html file of the scene with which I can then interact (e.g. zoom in/out, rotate) in my web browser. In R, I have created another scene that includes a loop

Hello there! I hope there is someone out there who is using the DICOM package. When Im trying to read my a DICOM file (MRI-data) I always get this error: > dicom.info("~/myfile") Error in readBin(fid, integer(), length, size = 1) : invalid value of 'n' The DICOM files that come with the DICOM package work just fine. I already tried both endian options. I can view my

Sorry for the probable repeat post but I can only search the list up to 2002 (is there a better way?). I am using the RH9 RPM from CRAN but packages like AnalyzeFMRI say that tcltk is not found. Do I need to do more to get Tk GUIs working on RH9 or does the RPM not have tcltk support built in (should I compile from source). Thanks in advance. Take care. -Morgan

Hi All: Package TSERIES is stated to depend on MVA. However, there is no MVA package to be found under the list of package sources. Best wishes, ANDREW tseries: Package for time series analysis Package for time series analysis with emphasis on non-linear and non-stationary modelling Version: 0.7-6 Depends: ts, mva, quadprog Date: 2001-08-27 Author: Compiled by Adrian

Hi, When plotting the density estimation with DrawDensity3D-function (in package VecStatGraphs3D) it often happens that the end product ie. layers are not intact , see figure in the link: https://www.dropbox.com/s/vzyaiu0vso8hjw2/20623868_10213333234554853_1371245353_n.png?dl=0 Can we somehow effect on that an get intact layers? -- Atte Tenkanen

Hello, Just a quick message to say that, ------------------------------------------------------------------------ ------- when choosing (with or without the tcltk window) "Bern 1 (swiss)" as CRAN mirror to install a package (function install.packages) for R-2.5.0, the list of available packages for osx seems not complete: AMORE, AdaptFit, AlgDesign, AnalyzeFMRI, SemiPar,