Displaying 18 results from an estimated 18 matches similar to: "Code works, but not as function."
2012 Nov 08
1
Extract cell of many values from dataframe cells and sample from them.
Hi,
First my apologies for a non-working piece of code in a previous submission, I have corrected this error.
I'm doing is individual based modelling of a pathogen and it's host. The way I've thought of doing this is with two dataframes, one of the pathogen and it's genes and effector genes, and one of the host and it's resistance genes. During the simulation, these things
2012 Oct 28
6
Having some Trouble Data Structures
Hi All,
I'm trying to run a simulation of host-pathogen evolution based around individuals.
What I need to have is a dataframe or table of some description - describing all the individuals of a pathogen population (so far I've implemented this as a matrix):
ID No_of_Effectors Effectors (Sequences)
[1,] 0001 3 ## 3
2012 Nov 27
2
Stuck trying to modify a function
Hi,
I have the following data:
Path_Number <- 5
ID.Path <- c(1:Path_Number) # Make vector of ID's.
No_of_X <- sample(50:550, length(ID.Path), replace=TRUE) #
X <- split(sample(1:10000, sum(No_of_X), replace=TRUE), rep(ID.Path, No_of_X))
Y <- lapply(X,function(x) sample(x, round(runif(1, min=10, max=50))))
X and Y are both lists, and I've made the following function to
2011 Jan 05
2
Simulation - Natrual Selection
Hi,
I've been modelling some data over the past few days, of my work,
repeatedly challenging microbes to a certain concentration of cleaner,
until the required concentration to inhibit or kill them increaces, at
which point they are challenged to a slightly higher concentration each
day. I'm doing ths for two different cleaners and I'm collecting the
required concentration to
2019 Jul 16
2
[ext] 2.3.7 slower than 2.3.6?
On 15 Jul 2019, at 23.17, Ralf Hildebrandt via dovecot <dovecot at dovecot.org> wrote:
>
> * Ralf Hildebrandt via dovecot <dovecot at dovecot.org>:
>> We're using dovecot (via LMTP) as a backup for all incoming mail.
>>
>> I upgraded from 2.3.6 to 2.3.7 on the 12th:
>> 2019-07-12 14:35:44 upgrade dovecot-imapd:amd64 2:2.3.6-2~bionic 2:2.3.7-8~bionic
2008 Feb 21
2
triangle.plot - change the axes orientation
Hello, I need to chenge axes orirentation in triangle plot. (function
triangle.plot in ade4 package)
I want to plot elasticities of some species in demographic triangle, where
axes values commnly increace "clockwise".
If some better imangination is needed, see
http://www.open.ac.uk/science/biosci/personalpages/j.silvertown/pdfs/Silvertown%20et%20al.%201993.pdf
I am sorry if I just
2011 Jan 05
0
Fwd: Re: Simulation - Natrual Selection
-------- Original Message --------
Subject: Re: [R] Simulation - Natrual Selection
Date: Wed, 05 Jan 2011 17:24:05 +0000
From: Ben Ward <benjamin.ward@bathspa.org>
To: Bert Gunter <gunter.berton@gene.com>
CC: Mike Marchywka <marchywka@hotmail.com>
On 05/01/2011 17:08, Bert Gunter wrote:
> Couple of brief comments inline below. -- Bert
>
> On Wed, Jan 5, 2011 at
2019 Jul 15
2
2.3.7 slower than 2.3.6?
We're using dovecot (via LMTP) as a backup for all incoming mail.
I upgraded from 2.3.6 to 2.3.7 on the 12th:
2019-07-12 14:35:44 upgrade dovecot-imapd:amd64 2:2.3.6-2~bionic 2:2.3.7-8~bionic
and it seems that 2.3.7 is slower than 2.3.6 -- mail to the backup
IMAP box is suddenly taking quite some time to get delivered and is piling up
in the queue.
doveconf -n:
============
2011 Jan 06
1
Splitting a Vector
Hi all,
I read in a text book, that you can examine a variable that is colinear
with others, and giving different ANOVA output and explanatory power
when ordered differently in the model forula, by modelling that
explanatory variable, against the others colinear with it. Then, using
that information to split the vector (explanatory variable) in question,
into two new vectors, one should
1999 Jun 18
1
Stepwise model selection question
I use the step() function occasionally, and I think I understand its
objective, proper use, and limitations. Now I see stepwise model selection
being used in what seems to be an unusual way, and I wonder if it is right
or wrong. May I describe?
Genetic mapping tries to find where in an animal's genome are genetic
elements that influence a particular physical trait. Say there are 100
2003 Jun 10
2
user can't member more than 15 group
Hello All !
why freebd user can't member more than 15 group ?
my system is FreeBSD 4.8-RC
I need that scripts running
from user "master" make some changes if files that owned by other users.
Shurely i can set UID of master to "0" but this increace vunerability
of system.
in /etc/group I add
user1:*:1001:master
...
user15:*:1015:master
--- all work Ok user master member
2006 Jul 05
0
wifi network performance is degrading with iproute2
Hello,
I used iproute2 to do iif specific routing on wifi routers with 2 wifi
802.11b interfaces on non overlapping interfaces.
I set rule as follows on router-2 (shown below)
use table 100 if incomming interface is wlan0
use table 200 if incomming interface is wlan1
all routes in table 100 have wlan1 as oif
all routes in table 200 have wlan0 as oif
--wlan0--
2019 Jul 15
0
[ext] 2.3.7 slower than 2.3.6?
* Ralf Hildebrandt via dovecot <dovecot at dovecot.org>:
> We're using dovecot (via LMTP) as a backup for all incoming mail.
>
> I upgraded from 2.3.6 to 2.3.7 on the 12th:
> 2019-07-12 14:35:44 upgrade dovecot-imapd:amd64 2:2.3.6-2~bionic 2:2.3.7-8~bionic
>
> and it seems that 2.3.7 is slower than 2.3.6 -- mail to the backup
> IMAP box is suddenly taking quite
2019 Jul 16
0
[ext] 2.3.7 slower than 2.3.6?
* Timo Sirainen via dovecot <dovecot at dovecot.org>:
> > And alas, I had a look at the monitoring and found that disk IO has
> > increase A LOT after the update: https://www.arschkrebs.de/images/dovecot-disk-io-increase.png
> >
> > I zoomed in and found that the sudden increace in IO coincides with
> > the update to 2.3.7 (14:35):
2012 Jan 03
0
Job opportunity in AMSTERDAM: ANALYSIS OF NGS CANCER DATA
COMPUTATIONAL ANALYSIS OF NEXT GENERATION SEQUENCE DATA
(http://bioinformatics.nki.nl/vacancies.php)
THREE BIOINFORMATICS POSITIONS
PROJECT OUTLINE
Genomic alterations are major determinant of responses to (targeted) therapies in cancer. In fact, the best positive and negative predictors of responses to targeted therapies are alterations in kinases or their direct downstream effectors. To
2019 Jul 17
1
[ext] 2.3.7 slower than 2.3.6?
On 16 Jul 2019, at 11.15, Ralf Hildebrandt via dovecot <dovecot at dovecot.org> wrote:
>
> * Timo Sirainen via dovecot <dovecot at dovecot.org>:
>
>>> And alas, I had a look at the monitoring and found that disk IO has
>>> increase A LOT after the update: https://www.arschkrebs.de/images/dovecot-disk-io-increase.png
>>>
>>> I zoomed in
2005 May 20
2
RSYNC with Double-byte
Hi All,
Can anyone suggest how to make rsync work in order to replicate
double-byte characters ?
Thanks to anyone who can help
aslay
2011 Feb 18
3
Confidence Intervals on Standard Curve
Hi, I wonder if anyone could advise me with this:
I've been trying to make a standard curve in R with lm() of some
standards from a spectrophotometer, so as I can express the curve as a
formula, and so obtain values from my treated samples by plugging in
readings into the formula, instead of trying to judge things by eye,
with a curve drawn by hand.
It is a curve and so I used the