similar to: Violin plot of categorical/binned data

Hello, I want to select same data of a data frame that has information of fish catches: catch, vessel, trip, day, month, year where trip is the fishing operation number done in each day by each vessel, i.e. for each day, any vesel can have several register of catch corresponding to each operation. >From this data frame I want to do: 1. Add the catches of all trip by vessel and day; then

Hi professors I'm finding the best package in R for manage a big database about vessels. I need to divided the travel of each boat into tracks. I have GPS points. I would join these points in a line on the map. I make that with the function "lines", but I can't divided by vessel or by track, I saw several packages, for tracking animals but they had specifically variables. And I

I am very new to R and programming and thank you in advance for your patience and help with a complete novice! I am working with a large multivariate data set that has 10 explanatory environmental variables (e.g. temp, depth) and over 60 response variables (each is a separate species). My data frame is set up like the simplified version below: JulianDay Temperature Salinity Depth Copepod

Some time ago, I sent a email to list. With my perfect english, wasn't possible explain my problem, then I recorded a video, end upload to youtube. Please watch the video. http://www.youtube.com/watch?v=z1KJ8sA4_5w Samuel Rios Carvalho

Using Trellis, am successfully setting up a number of panels (25) in which I have two box and violin plots. I would like to colour - one plot as RED and the other as BLUE (in each panel). I can do that with the box plots, but the violin density areas just take on one colour. My basic call is as follows: bwplot(rmsd ~ file | code, data=spread_data.filtered, panel = function(...,

Hello, I am trying to graph a violin plot like the example in panel.violin(lattice) with the singer data - see below Does anyone know how to change the color of the boxplot on the graph from blue to green? I tried a number of changes, but to no avail. Thanks for your help, John bwplot(voice.part ~ height, singer, panel = function(..., box.ratio) {

Is it possible to create weighted boxplots or violin plots in lattice? It seems that you can specify weights for panel.histogram() and panel.densityplot(), but not for panel.bwplot or panel.violin(). Please let me know if I've missed something in the package documentation. Thanks! -- Raphael D. Mazor Freshwater Biologist Southern California Coastal Water Research Project 3535 Harbor Blv

Hi,? I have made violin plot with both ggplot2 and vioplot package with same data.? The results and code are as follows.? ################### ?Loading data? data.melt <- dget("https://gubox.box.com/shared/static/rirth0eym114afwyjxwe128sjzipzdym.txt") ################### ?Violin plot by library(vioplot) library(vioplot) data.use_11<- data.melt$value[data.melt$ident == 0]

I'm attempting to produce something like a violin plot to display how y changes with x for members of different groups (My specific case is how floral area changes over time for several species of plants). I've looked at panel.violin (in lattice), which makes nice violin plots, but is really set up to work on a single variable - the area trace represents the frequency of each value of x

Han-Lin I don't think I have seen a reply so I will suggest that maybe you could try a different approach than what you are thinking about doing. I believe the current best practice is to use the weights as a covariate in a regression model - and bytheway - the weights are the inverse of the probabilities of selection - not the probabilities. Fundamentally, there is a difficulty in making

I am trying to make horizontal violin plots. I have tried both vioplot and simple.violinplot, but both of them seem to not be willing to take the horizontal option. Is this correct, or am I just bungling it somehow? For instance, for vioplot (from the example shown, with the horizontal modification): > vioplot(bimodal,uniform,normal, horizontal=TRUE) Error in median(data) : need numeric data

Hi all! I have come into a strange issue in Rails that I am hoping someone can shed some light. To make a very long story short, I have been researching how to override ActiveRecord::Base#read_attribute and write_attribute to perform security checks at the model level (influenced by the ModelSecurity generator). Shortly after implementing some code to check this behavior, I began to

Dear Rgurus, To my knowledge the best way to visualize the distribution of a discrete variable X is plot(table(X)) The problem which I have is the following. I have to discrete variables X and Y which distribution I would like to compare. To overlay the distribution of Y with lines(table(Y)) gives not satisfying results. This is the same in case of using density or histogram. Hence, I am

Dear R Users, I would like to know is there any package to create a plot like this? http://dl.dropbox.com/u/5409929/cs1160521f01.gif X axis is categorical. And the positions of the points are corresponding to the frequency. (similar to violinplot) Thank you. Regards, CH -- CH Chan

Dear gracious R community, I would like to produce charts of phytoplankton biomass changes through time. Each species has a line, and the biomass varies in mirror form along the line for each species along the X time axis. Here is an example of what I'd like to do: http://www.er.uqam.ca/nobel/r30240/Succession.jpg Any suggestions? Thanks David Bird UQAM, Montreal

Dear everyone, I would like to create a kite chart in which I plot densities (width of the vertical kites) in relation to sediment depth (on reversed y-axis) for 6 different locations (Distances from seep site, on x-axis on top of the plot). The dataset I would like to use is: Distance_from_seep_site Sedimentdepth Density 1100 0 107.8 1100 1 264.6 1100 2 284.2

I'm trying to do a Hosmer-Lemeshow 'goodness of fit' test on my logistic regression model. I found some code here: http://sas-and-r.blogspot.com/2010/09/example-87-hosmer-and-lemeshow-goodness.html The R code is above is a little complicated for me but I'm having trouble with my answer: Hosmer-Lemeshow: p=0.6163585 le Cessie and Houwelingen test (Design library): p=0.2843620

Hey, I hope someone is able to help. I've created a graph using kiteChart (in the plotrix package) but need to know how to perform some basic text alterations to the graph. I would like to re-orientate the text on the y-axis from vertical to horizontal. I understand that the argument normally for this is las=1. However, this does not seem to work. Perhaps kitechart uses an alternative

Dear R-users I hope someone could help me on this problem. I want to create a multiple kiteChart showing the real values with a scalebar on each indicating the scale . Here are some sample data to show what I want to achieve. Y <- read.table(textConnection("Sample1 Sample2 60 20 150 50 300

Although, I can fix this, I am trying to sort out something as straighforward as possible for my students, and I have some questions that hopefully someone can help me with. My data is: Species Distance Count A 5 0 A 10 5 A 15 5 A 20 3 A 25 1 B 5 8 B 10 20 B 15 28 B 20 12 B 25 12 C 5 5 C 10 12 C 15 19 C 20 27 C 25 34 But I am struggling to get this into a data frame that does