similar to: Java Exception error while reading large data in R from DB using RJDBC.

Displaying 20 results from an estimated 300 matches similar to: "Java Exception error while reading large data in R from DB using RJDBC."

2012 Feb 15
1
Passing date as parameter while retrieving data from database using dbGetQuery
Hi All, This might be simple question, I need to retrive data for modelling from the databases. Eveytime date values changes so I countnot fix date value in the code, it is required to pass as parameter. When I pass the date as parameter, it throws error. (ERROR: column "start_dt" does not exist Position: 285) My script is as below, please guide me where am I going wrong? All parameters
2012 Feb 09
0
Java heap space Error while reading table from postgres database using RJDBC
Hi List, I am reading table from postgres database into R session using RJDBC, table contains 150 columns and 200000 rows. Sample code is as below, which works fine with smaller tables. ######################################################################## db_driver <- mydir$db_driver db_jar_file <- mydir$db_jar_file db_server <- mydir$db_server db_server_lgn <- mydir$db_server_lgn
2012 Aug 02
1
RJDBC in Ubuntu
Hi, I'm working with R on Cassandra and need to install RJDBC on my Ubuntu virtual machine. The traditional commands (install.packages(RJDBC, dep=TRUE) and library(RJDBC)) don't work: they throw an error that they can't find the package. I tried installing it using the Rkward GUI, but can't write to any of the pre-set directories because of permissions issues. When I try running
2010 Nov 24
1
RJDBC doesn't load Oracle driver?
After installing RJDBC on RedHat Linux and using it successfully with mySQL JDBC driver i am trying to use it with Oracle database. I use the JDBC driver that works fine elsewhere (use it in DBVizualizer). However, when i try to load the driver, drv<-JDBC("oracle.jdbc.driver.OracleDriver", "/home/az05625/DBdrivers/ojdbc6.jar", identifier.quote="`") it gives me
2011 Feb 10
1
rjdbc identifier.quote
Dear all Backend is Ingres DBMS I use RJDBC with Ingres JDBC driver I have this csv file "","Strategy","par1","m.1997.09.01" "1","ALF",2,0.1244 which I try to load it RJDBC require (RJDBC) drv <- JDBC("com.ingres.jdbc.IngresDriver","/home/ingres/ingresv1/ingres/lib/iijdbc.jar") conn <- dbConnect(drv,
2007 Sep 27
2
rJava and RJDBC
I am desperate for help. I am trying to get the RJDBC and rJava .5to work on both my windows xp and linux Redhat EL5 Server. On both I get a ava.lang.ClassNotFoundException when calling JDBC(). My example is require(RJDBC) classPath='C:\\libraries\\mysql-connector-java-5.1.3-rc\\mysql-connector-java-5.1.3-rc-bin.jar' driverClass=c("com.mysql.jdbc.Driver") drv <-
2009 Aug 26
1
Installing rJava RJDBC bad interpreter: Permission denied
Trying to install the above two packages via the "install.packages("package_name")" command and the "R CMD INSTALL file.tar.gz". I receive the following error either way "sh: ./configure: /bin/sh: bad interpreter: Permission denied". I have tried to chmod and chown permissions and also ran dos2unix in hopes that there is a CRLF in some of the tar.gz files,
2008 Jun 02
1
RJDBC cant find driver class in JDBC jar file
I would like to set up a Windows XP environment with R and MySQL. This set-up was recommended by a friend who uses this set up, but I have been unable to get RJDBC to work. I have installed all of the software today (June 2 2008), first deleting and then replacing old versions of software. The error is as follows: Error in .jfindClass(as.character(driverClass)[1]) : class not found This error
2011 Feb 03
3
Reg : read missing values from database using RJDBC
Hi R-helpers, i am using the following dataset.This dataset is stored in a mysql database. W(x) pH(y) 10 1 15 1 20 4 5 7.5 3 13 9 5 11.5 13.5 3 16 2 1 9.6 1 I am using RJDBC package to read the data from the database into a dataFrame.The commands used are, jdbcDriver<-JDBC(driverClass="com.mysql.jdbc.Driver",
2009 Sep 02
1
Installing rJava RJDBC bad interpreter: Permission denied
Trying to install the above two packages via the "install.packages("package_name")" command and the "R CMD INSTALL file.tar.gz". I receive the following error either way "sh: ./configure: /bin/sh: bad interpreter: Permission denied". I have tried to chmod and chown permissions and also ran dos2unix in hopes that there is a CRLF in some of the tar.gz files,
2009 Sep 02
1
Installing rJava RJDBC bad interpreter: Permission denied
Trying to install the above two packages via the "install.packages("package_name")" command and the "R CMD INSTALL file.tar.gz". I receive the following error either way "sh: ./configure: /bin/sh: bad interpreter: Permission denied". I have tried to chmod and chown permissions and also ran dos2unix in hopes that there is a CRLF in some of the tar.gz files,
2011 Feb 16
1
Rjdbc dbGetquery execution error
Rjdbc consistently gives me an execution error with postgresql 9.0s JDBC4 driver. It's probably something trivial so am including my code below: library("RJDBC") param <- 249 param2 <- 188129 postgres <- JDBC("org.postgresql.Driver", ".m2/repository/postgresql/postgresql/9.0-801.jdbc4/postgresql-9.0-801.jdbc4.jar") con <- dbConnect(postgres,
2010 Jun 23
1
RJDBC vs RMySQL vs ???
I am running a simple SQL SELECT statement that involvs 50k + data points using R and the RJDBC interface. I am facing very slow response times in both the RGUI and the R console. When running this SQL statement directly in a SQL client I have processing times that are a lot lot faster (which means that the SQL statement itself is not the problem). Did any of you compare RJDBC vs RMySQL or is
2007 Mar 05
1
RJDBC
I need help. I'm trying to connect with an Oracle DBMS and MySQL DBMS, I'm using RJDBC package. My code is the next: library('rJava') library('DBI') library('RJDBC') //Mysql drv <- JDBC("com.mysql.jdbc.Driver","C:\\Temporal\\mysql-connector-java-3.0.9-stable-bin.jar","'") conn <- dbConnect(drv,
2011 Jun 26
1
RJDBC and multiple classpaths
Corect me if this is not the right place to post this. I have a mdbdriver.jar (to access an MSAccess file) under Linux. I bought the license from http://www.csv-jdbc.com/ guys. The driver work fine when tested with DBVisualizer or another JDBC thing. The problem is that driver needs 3 other more jar files to work. Under R I have tried this and does not work: > library(RJDBC) Loading required
2011 Dec 21
1
Reg : Using RJDBC to read UTF-8 characterrs
Hi All, We are using the following dataset which contains UTF-8 characters and is stored in a MySQL database. When we use RODBC and read the data, the characters are read correctly.But when we read using RJDBC ,the characters are read like ???????????????????????????1 Can you please let me know how we can read the UTF-8 characters as it is done by RODBC. ID code Outlook Temperature Humidity
2010 Oct 12
1
append rows to Sybase datatable using RJDBC
Hi, Does anyone have experience using RJDBC library to write to Sybase datatable? The jdbc driver I am using is jConnect 6.0. I can successfully write into a new datatable, but have problem appending rows to existing one. It either complains "Table *** already exists" or simply overwrite the existing one. Here is the example. I am trying to append 'data' to the existing
2007 Dec 14
1
RJDBC to OpenOffice Calc as RODBC to MS Excel
Under Windows, I have used RODBC to connect to Excel spreadsheets as per the example below: library(RODBC); connect = odbcConnectExcel("testdata.xls"); query = "SELECT [data$.ethn], [data$.sex], [data$.age], [data$.height], [data$.weight], [label$.label] FROM [data$], [label$] WHERE [data$.ethn] = [label$.ethn];" data =
2011 Oct 19
4
Using SQL "IN" with RJDBC or RMySQL
Hello, The code below works fine up until I try to use the "IN" statement in the last line. The proper SQL format is: SELECT * FROM this_table WHERE this_column IN (1,2,3,4,5) But, I think I may be getting something like: SELECT * FROM this_table WHERE this_column IN c(1,2,3,4,5) Which makes no sense in SQL. I think it may be just a matter of string massaging, but I'm not
2011 Oct 31
3
How to get Quartiles when data contains both numeric variables and factors
When data contains both factor and numeric variables, how to get quartiles for all numeric variables? n <- 100 x1 <- runif(n) x2 <- runif(n) x3 <- x1 + x2 + runif(n)/10 x4 <- x1 + x2 + x3 + runif(n)/10 x5 <- factor(sample(c('a','b','c'),n,replace=TRUE)) x6 <- factor(1*(x5=='a' | x5=='c')) data1 <- cbind(x1,x2,x3,x4,x5,x6) data