similar to: omega vs. alpha explanation

Dear all I am a newbie to R and I would appreciate it very much if someone can give me some advice on this. Please note that I am not a programmer so some of the questions might sound really stupid. I would like to compute McDonald's omega calculation using R, I'm aware I can use the omega function in the psych package. But I'm really not sure how to do it. I have read these two

Hi, I am traying to implement an STAR model, but I have some problems. I am following the instruction of the model, that they are in: http://bm2.genes.nig.ac.jp/RGM2/R_current/library/tsDyn/man/star.html that they are from: http://bm2.genes.nig.ac.jp/RGM2/pkg.php?p=tsDyn The model is: star(x, m=2, noRegimes, d = 1, steps = d, series, rob = FALSE, mTh, thDelay, thVar, sig=0.05, trace=TRUE,

How to adapt this piece of code but for: - gamma distribution - 3 parameter log normal More specifically, where can I find the specification of the parameter (lmom) for pelgam() and pelln3()? Lmom package info just gives: pelgam(lmom), lelln3(lmom), where lmom is a numeric vector containing the L-moments of the distribution or of a data sample. # Draw an L-moment ratio diagram and add a line for

Hi. First of all, excuse me if I do any mistakes, but English is not a language I use very often. I have a data frame with numbers. A small part of the data frame is this: nominal ordinal 2 2 2 1 2 1 2 2 So, I want to use the gower distance function on these numbers. Here (

I'd like to create a polar plot similar to those created by the polarFreq function in the openair package. However, this package seems to be specific to wind speed and direction, and requires a "ws" (wind speed) and a "wd" (wind direction) column. My data is unrelated to wind speed, but I'd like to be able to get a plot that does what polarFreq's plots do; I'd

Dear All, I'm having trouble tweaking a forest plot made using the R meta-analysis package metafor. I did the analysis based upon the correlation coeff from studies and plotted the corresponding forest plot easily > q2<-rma(yi,vi,mods=cbind(grupo),data=qim) > q2 > forest (q2,transf=transf.ztor,digits=3, ... ,alim=c(0,1),refline=.5) > text(-1.55,42,"Esp?cie

Greetings of Peace! I am new in R software. I want to use the correlation dimension corrDim in computing a map. I have installed the packages(fractal) in R. Now my problem is this, when I tried your example in the following site http://rgm2.lab.nig.ac.jp/RGM2/func.php?rd_id=fractal:corrDim  > library(fractal) > png(filename="corrDim_%03d_med.png", width=480, height=480) >

Dear List, Following the link below ( http://rgm2.lab.nig.ac.jp/RGM2/func.php?rd_id=plotrix:clock24.plot) I got an interesting polar plots which displayed my data and the time of observation. Thank you very much for providing such details. However, I have two set of data which I wish to display in the same polar plot. I tried using points to add the second data but could not succeed. That is,

Hello all , I am beginner and new to this -R world. I have heard much about R and started working on it. I have some data of 20 business applications( y -axis) and Months( x-axis) and values as their score for every month . I tried to generate a heatmap with this data and got some good results. Can some one help me on how to generate the legend next to heatmap please... can some one send me

Hi All, I want to produce a similar "Forest Plot" as it is on the following link, but my data would be having only two columns (one for "Estimate" and other for "Std. Dev"). Can anyone suggest some function() {Package} which can take such file as an input and give following forest plot:

Hi! I am trying to analyse my data using amova (http://www.oga-lab.net/RGM2/func.php?rd_id=pegas:amova): My input to R is a DNA sequence file, format=fasta dna<- read.dna("XX.fasta", format="fasta") #left other options as default d<- dist.dna(dna, model="raw") g<- read.table("XXX.design") Load necessary libraries: library(pegas)

Hello everbody, I am new to this mailing list and hope to find some help. I'm trying to get into the spatstat package and encountered two problems. First a graphical one: There is an example dataset called "finpines" which has several marks (http://www.oga-lab.net/RGM2/func.php?rd_id=spatstat:finpines) When I pass the given code from the website to R data(finpines)

Odette > Wondering how can I generate "Akaike weight" with R? I know the description, > but is there any function to generate by R on the web-site or R library? > I am using GLM or GLMM (family=binomial), so would be appreciated if you > help me. You could have a look at this. http://bm2.genes.nig.ac.jp/RGM2/R_current/library/aod/man/summary.aic.html Which is in the OAD

Hi everyone! I already posted http://r.789695.n4.nabble.com/Declaring-a-density-function-with-for-loop-td4635699.html a question on finding density values of a new Binomial like distribution which has the following pmf: http://r.789695.n4.nabble.com/file/n4636134/kb.png Thank fully http://r.789695.n4.nabble.com/template/NamlServlet.jtp?macro=user_nodes&user=124474 Berend Hasselman and

Hi, I was wondering if anyone knows of a package that contains the ability for peak/valley detection. Here is an example of what I'm looking for, only problem is that it's written in Matlab. http://www.billauer.co.il/peakdet.html Thanks for any help in advance. -Joe

Hi, I have the two vectors mean and sd of individual columns, but I am unsure how to generate bar charts with the standard deviation, even after looking the help of barplot and barplot.2. [[alternative HTML version deleted]]

I was not sure who I should contact about this, so I am posting this here. There are a few broken links on the R website. 1) http://www.r-project.org/search.html -> link to the Nabble R Forum. I belive the correct/new URL should be: http://r.789695.n4.nabble.com/ 2) http://www.r-project.org/other-docs.html -> link to "Auswertung ?kologischer Daten". Not sure if there is a new

Graphics about... Bayesian ChemPhys Cluster Distributions Econometrics Environmetrics ExperimentalDesign Finance Genetics gR Graphics HighPerformanceComputing MachineLearning MedicalImaging Multivariate NaturalLanguageProcessing Optimization Pharmacokinetics Psychometrics Robust SocialSciences Spatial Survival TimeSeries Other URL: http://bm2.genes.nig.ac.jp/RGM2/index.php?clear=all -- Share

I would like to try the SSA approach with my data. If i am not mistaken there is a package named "clim.pact" in the R repository that does that. I tried to download on my Linux box and it failed as it cannot resolve a dependency that is only needed for Windows platform (that is written in the site http://cged.genes.nig.ac.jp/RGM2/pkg.php?p=clim.pact). I wonder if someone knows the

Dear List, R ist somtimes a bit frustrating... I ran the example from http://bm2.genes.nig.ac.jp/RGM2/R_current/library/QRMlib/man/plotMultiTS.html and I get an error. Has someone an explanation for this? Thanks a lot, Steve CODE: library(R.utils) library(tseries) library(wmtsa) library(waveslim) library(brainwaver) library(timeSeries) library(QRMlib) > ?plotMultiTS >