similar to: error bars on line plot with error bars using ggplot

Hi there everyone! So I'm a student in college, taking a very basic Statistics course. We're using R for most of our assignments. I've hit a pretty big wall here. I'm attempting to create a heat map of the entire united states which corresponds to a set of percentages I have for each state. My teacher suggested that I simply create a color palette with RColorBrewer that is in the

I'm trying to reproduce the 3rd graph on the page of this site: http://learnr.wordpress.com/2009/03/17/ggplot2-barplots/ . However, the data below produces a ggplot with the stacks sorted in alphabetical order from the bottom up. I'd like the stacks to be in the order "Europe", "Asia", "Americas, "Africa", "Oceania". Is there an easy way to

Hi all, i'm fairly new to R and its graphing, but having unsuccessfully 'googled' and checked this forum to find answer to my problem, i'm posting my question here. I'm trying to plot stacked barplot. I have simple data that looks like this: bg ag 0.41 2.81 0.37 2.91 0.31 2.06 0.32 2.39 every row indicates a factor (1,2,3,4, see below in names.arg). Now when i plot

Dear R list, I am having some trouble drawing a bar-graph with two groups, both of which are stacked. A sample of my data (IUCN and national conservation status for marine and terrestrial species) look like this: Status IUCN Terrestrial IUCN Marine National CS Terrestrial National CS Marine NE 168 69 16 69 LC 41 6 148 6 NT 5 4 7 4 VU 4 2 7 2 EN 4 2 4 2 CR 1

Dear R list, It appears that my request from yesterday got a bit garbled. I have tried to rephrase and retype it - please let me know if you can help me - I am having some trouble drawing a bar-graph with two groups, both of which are stacked. I would like to plot the conservation status according to two classifications (i.e. my groups - IUCN status and national status), and for each of those

Hi, I cannot figure out how to draw a certain plot: could someone help me out? I have this data.frame from a survey my.data that looks like something like this: col1 col2 col3 col4 1 5 5 4 5 2 3 5 3 1 3 2 3 4 5 4 3 1 1 2 5 5 5 4 5 6 4 2 5 5 .... Each row represents a single questionnaire

Dear All, I am trying to build a stacked bar plot, where I define the colours to use. I have asked this before, and I was using a solution in http://thread.gmane.org/gmane.comp.lang.r.general/100649/focus=100673 (thanks, Thierry). However, it looks this works only when the data are in the sequence of the levels in the factor defining the fill colours. When the sequence is different, the

Hi, This is another question relating to my 2 factor figure. densityplot(~End-Begin | Type * Chromosome, data=Mon, layout=c(5,12), xlab="Element Length",type="percent", col="grey60", strip=strip.custom(style=3, bg="grey90", par.strip.text=list(cex=0.5))) I would like to flip the plot so those at the bottom are at the top and so on. I have tried using a

Hi, I wonder whether there is a way to generate a polygon (a triangle in my case) with color gradient using grid.polygon() in package grid? I tried something like library(grid) grid.polygon(x=c(0, 0.5, 1), y=c(0.5, 1, 0.5), gp=gpar(col=NA, fill=colorRampPalette(c("green", "lightgray"), space="Lab")(200))) But am only

Dear list, I would like to plot 2 series of numbers with very different ranges/scales as lines on the same plot. I assumed this is commonly done and easy, but I have not found any help files (e.g. axis() or matplot() that show how. I've searched many old posts to no avail. I'll be very grateful for any suggestions on how this is done. Best, Zack

Dear useRs, I want to plot the following barplot with lines instead of bars. Is there a way? data <- data.frame(cbind(k = 0:3, fk = c(11, 20,7,2), f0k = c(13.72, 17.64, 7.56, 1.08), fkest = c(11.85, 17.78, 8.89, 1.48))) d <- t(data[,2:4]) barplot(d, beside=TRUE) Regards, Rafael. ____________________________________________________________________________________ [[elided Yahoo

I am having trouble getting data labels to display over the provinces in a GADM map of Canada. Specifically, I need the variable "Number" from the data set "by_province", grouped by "region", to appear on the corresponding regions of the map. The data set "by_province" looks like this: long lat order hole piece region

Hi, I want to display some contour labels. It works well, but the thickness of the label is to low. I tried the "labcex" command contour(x,y,z, labcex=2) But only the size is rising and not the thickness of labels. Only if i set the value to "labcex=10" the thickness is good, but the size is to big, so i can't see anything ;) Is there any command to rise the thickness

Hello, I am trying to increase the thickness of the axis in plot() without reverting to the use of paint programs i see posts on that topic for the xyplot function but want to see if i can do it with plot() because i've already setup my graph script using that i thought i could use axis() function and specify lwd="thickness" or lwd.axis= but that does not work like it does for

My question relates to problems that I'm having matching lme and lmer examples in P&B. using Matix 0.995 In the Oxide example in p167-170 I can't get the level 2 coefficient estimates to match the fm1Oxide model in lme is data(Oxide,package="nlme") lme(Thickness~1,Oxide) which I translate in Lmer syntax to fm3Oxide<-lmer(Thickness~

Dear forum, Does anyone know any functions for plotting vertical error bars, if the x-axis variable is a date? I can produce a pretty plot with dates on the x-axis, if I don't want to include error bars. I can also produce a nice plot with error bars, if I just use Julian days for the x-axis, but I'd much rather have the actual dates. I have tried writing my own function, plotCI

Dear list, Following a recent enquiry, I've been playing with the idea of creating a colour gradient for a polygon, using the Grid package. The idea is to draw a number of stripes of different colours, using the grid.clip function. Below is my current attempt at this, library(grid) rotate.polygon <- function(g, angle=0){ # utility function, works fine matR <- matrix(c(cos(angle),

Hi guys im having a problem getting R to numerically integrate for some function, say f(bhat)*optimize(G(bhat)), over bhat. Where id like to integrate this over some finite range, so that here as we integrate over bhat optimize would return a different optimum. For instance consider this simple example for which I cannot get R to return the desired result: f <- function(bhat) exp(bhat) g

Hi, I have a data set with 7 years worth of data, and 2 different values (a real value and a model value) of interest in each year for different lengths. I would like a plot with the year on the y axis and an animal length along the x axis. For each year I would like to see two lines, one representing real data and one representing model data. I would like either the model or real line to

Hello- I am having trouble making a barplot... The y-values are: data=c(-0.0002129061,0.0000000000,-0.0002699561,0.0163883061,0.0400000000). The x-values are distance=c(0, 71, 172, 206, 292). The desired x-range is 0 and ~300+ (kilometers), range=seq(0,300,1) I would like to make a bar plot with the bar locations along the x-axis spaced according to their distances. I have tried