similar to: Reading multiple files

Dear all, I need to do the same procedure on several files. But I don't know how to refer to the file name. Here is an example of what I am trying to do. List of files: file1(A,B,C, D1...Dn), file2(A,B,C,E1,...,En), file3(A,B,C,F1,...,Fn) Procedure I want to apply on each file: dft <- melt(df,id=c('A','B','C')) dft$X <- substr(dft$variable,1,3) dft$Y <-

Dear R Community, I'm trying to write a loop to split my data into different series. I need to make a new matrix (or series) according to the series code. For instance, every time the "code" column assumes the value "433" I need to save "date", "value", and "code" into the "dados433" matrix. Please take a look at the following

Hi all, I'm having this error, since I'm working with a data matrix I don't understand what's happening; I've tried several ways to solve this, even working with sparse matrix, but nothing seems to solve it, I've also tried svm (with a simple matrix 3*3 and still got the same error. > dados<-read.table("b.txt",sep="",nrows=30000) >

Hi. I have 2 tables, with same dimensions (8000 x 5). Something like: tab1: V1 V2 V3 V4 V5 14.23 1.71 2.43 15.6 127 13.20 1.78 2.14 11.2 100 13.16 2.36 2.67 18.6 101 14.37 1.95 2.50 16.8 113 13.24 2.59 2.87 21.0 118 tab2: V1 V2 V3 V4 V5 1.23 1.1 2.3 1.6 17 1.20 1.8 2.4 1.2 10 1.16 2.6 2.7 1.6 11 1.37 1.5 2.0 1.8 13 1.24 2.9 2.7 2.0 18 I need generate a table of averages, the

Hi all, My code looks like the following: inname = read.csv("ID_error_checker.csv", as.is=TRUE) outname = read.csv("output.csv", as.is=TRUE) #My algorithm is the following: #for line in inname #if first string up to whitespace in row in inname$name = first string up to whitespace in row + 1 in inname$name #AND ID in inname$ID for the top row NOT EQUAL ID in inname$ID for the

Hi, I have 22 files (A1, A2, ..., A22) with different number of columns, totaling 10,000 columns: c1, c2, c3, ..., c10000 I have another file with a list of 100 columns that I need to extract. These 100 columns are distributed in 22 files. How to extract the 100 columns of the 22 files? I have done it "manually" with the following commands, for example: cromo1 = read.table ("~

Hi, I'm doing kolmogorv-smirnov test but I don't know what conclusions to take, I want to know if my data has a normal distribution: > ks.test(dados1,"pnorm") One-sample Kolmogorov-Smirnov test data: dados1 D = 0.972, p-value < 2.2e-16 alternative hypothesis: two-sided Warning message: cannot compute correct p-values with ties in: ks.test(dados1,

Hi, I have to do 10,000 linear regression analysis, and the response variable (RESP) is the same for all independent variables (10,000). y ~ x[i] i = 1, ..., 10000 For each analysis must extract the p-value and put them in an orderly increasing. I thought an analysis of the type: ana = numeric(10000) for(i in 1:10000){ mod = lm(RESP~x[i] p-value[i] = summary(mod)$coe[2,4] } Could

Hi, I'm fitting a model with 3 variables: A, B and SNP. The response variable is Y. I would like fit the following model, in this order: Y ~ A + B + A*B + SNP In general, the R sets of the form: Y ~ A + B + SNP + A*B How do this? --------------------------------------------- Silvano Cesar da Costa Universidade Estadual de Londrina Centro de Ci?ncias Exatas Departamento de Estat?stica

I'm comparing R-1.3.0 on Solaris 2.6 to R-1.3.1 on WindowsNT. The following 5-line script returns TRUE on Unix but FALSE on NT: fnam <- tempfile() file.create(fnam) txt <- paste("file.exists(\"", fnam, "\")", sep="") expr <- parse(text=txt) eval(expr) The issue seems to be that backslashes get lost in the parsing. A workaround is to change

Dear helpers I constructed a data frame with this structure > str(dados1) `data.frame': 485 obs. of 16 variables: $ Emissor : int 1 1 1 1 1 1 1 1 1 1 ... $ Marisca.Rio : int 1 1 1 1 1 1 1 1 1 1 ... $ Per?odo : int 1 1 1 1 1 1 1 1 1 1 ... $ Reproducao : int 3 3 3 3 3 3 3 3 3 3 ... $ Estacao : int 2 2 2 2 2 2 2 2 2 2 ... $ X30cm : int

Hi, The program below work very well. (snps = c('rs621782_G', 'rs8087639_G', 'rs8094221_T', 'rs7227515_A', 'rs537202_C')) Selec = todos[ , colnames(todos) %in% snps] head(Selec) But, I have a data set with 1.000 columns and I need extract 70 to use (like snps in command above). This 70 snps are in a file. So I create a file to extract them with

Hello Everyone I have an R script (and a source file which I keep my functions) that I need to run on 70 data sets (each consisting of a pair of files). I wish to run these data sets in a computer cluster that is run by my uni (HOWEVER they cannot help me with this problem but say it is do-able) the cluster is clever enough that if i set my data up as follows: within one folder called

Hi, I'm using the Sweave and I would like include codes of the R in my LaTeX file. I extracts the R code with Stangle (), whose name is Relatorio.R but I can't include it in the Latex file as an appendix. Suggests? Thanks, -------------------------------------- Silvano Cesar da Costa Departamento de Estat?stica Universidade Estadual de Londrina Fone: 3371-4346

Hi, I want to build the table of a football league with 11 teams. All play together. So will 55 games. Since there are an odd number of teams in each round a team will not play. The games will be: games = urnsamples(1:11, x = c('A','B','C','D','E','F','G','H','I','J','K'), size=2, replace=F,

----- Original Message ----- From: "Silvano" <silvano at uel.br> To: <r-help at r-project.org> Sent: Thursday, June 30, 2011 9:07 AM Subject: Tables and merge > Hi, > > I have 21 files which is common variable CODE. > Each file refers to a question. > > I would like to join the 21 files into one, to construct > tables for each question by CODE. >

Working on Windows I have had to deal with CSV files that, unfortunately, contain embedded Control-Zs, i.e. ASCII character 26 in decimal, and the readLines() function in R on Windows (2.15.2 and 3.0.0) appears to truncate at the control-Z. There is no problem at all on Ubuntu Linux with R 3.0.0. Am I mistaken or is this genuine? # Create a small file with embedded Control-Z h3 <-

?Hi: I always use subset the same way but now is returning 0 rows. What's wrong with the way I am subsetting? library(ggplot2) structure(list(first = c(38.2086, 43.1768, 43.146, 41.8044, 42.4232, 46.3646, 38.0813, 40.0745, 40.4889, 38.6246, 40.2826, 41.6056, 34.5353, 40.0768), second = c(43.3295, 42.4326, 38.8994, 37.0894, 42.3218, 46.1726, 39.1206, 41.2072, 42.4874, 40.2657, 38.7766,

Hi, How do I build a table from a regression model adjusted using xtable? Commands are: modelo1 = lm(Y~X1 + X2) influencia = influence.measures(modelo1) require(xtable) xtable(influencia) but it isn't work. Thanks, -------------------------------------- Silvano Cesar da Costa Departamento de Estat?stica Universidade Estadual de Londrina Fone: 3371-4346

Hi, I have this data set: obitoss = c( 5.8,17.4,5.9,17.6,5.8,17.5,4.7,15.8, 3.8,13.4,3.8,13.5,3.7,13.4,3.4,13.6, 4.4,17.3,4.3,17.4,4.2,17.5,4.3,17.0, 4.4,13.6,5.1,14.6,5.7,13.5,3.6,13.3, 6.5,19.6,6.4,19.4,6.3,19.5,6.0,19.7) (dados = data.frame( regiao = factor(rep(c('Norte', 'Nordeste', 'Sudeste', 'Sul', 'Centro-Oeste'), each=8)), ano =