similar to: [ncdf4] error converting GEIA data to netCDF

Hello, I'm trying to install ncdf4 on RHEL 5.8, R version 2.15.1. Previously installed is netcdf 3.6.2 from Red Hat, so I've compiled and installed netcdf 4.2.1.1 (with hdf5 and zlib as per install instructions, and also set --enable-netcdf4 option) into /usr/local. When attempting to install ncdf4 it is failing with: ** testing if installed package can be loaded Error in

Wanting a commandline solution (for a problem detailed @ http://mailman.unidata.ucar.edu/mailing_lists/archives/netcdfgroup/2012/msg00279.html ) I turned to Rscript, and whacked out the q'n'd https://github.com/TomRoche/GEIA_to_netCDF/blob/master/netCDF.stats.to.stdout.r However it wasn't as quick as hoped, because I spent quite a bit of time figuring out how to pass the arguments.

summary: spatial data to be input to a regional-scale environmental model must (1) be converted to netCDF and then (2) "regridded" (cropped, projected, increased resolution). In a public git repository https://github.com/TomRoche/GEIA_to_NetCDF I have R code (with bash drivers) that does the conversion step, and plots the converted output, apparently correctly. However attempts to plot

summary: how to structure an R file such that it can be both 1. used as a script via, e.g., (from OS commandline) $ Rscript foo.r bar=baz 2. imported and called as a function via, e.g. (from R commandline) > source('./foo.r) > foo(bar='baz') ? I'm looking for the 'R equivalent' of how python supports this usecase. details: As discussed in the thread beginning

Dear R Users, I am encountering a problem when reading nc files into R using the ncdf and ncdf4 libraries. The nc files are too large to attach an example (but if someone is interested in helping out I could send a file privately via an online drive), but the code is basic: for(i in 1:length(thesenames[,1])){ data <- nc_open(paste(INDIR, thesenames[i,c("wholename")],

On Fri, Apr 22, 2016 at 1:32 AM, Louise Mair <louise.mair at slu.se> wrote: > Dear R Users, > > I am encountering a problem when reading nc files into R using the ncdf > and ncdf4 libraries. The nc files are too large to attach an example (but > if someone is interested in helping out I could send a file privately via > an online drive), but the code is basic: > ?[...]?

Hello, I have no previous experience with R, but had to learn on the fly in the past couple of weeks. Basically, what I am trying to do is read a certain variable from a series of files and save it as csv-table. The variable has an hourly value for each month in a year for the past 20 years and has to be read for different geographical locations. So there will be 12 files per year (1 for each

Dear all I'm a newbie regarding netcdf data. Today I realized that I maybe do not understand some basics of the netcdf. I want to create a *.nc file containing three variables for Switzerland. All data outside of the country are NAs. The third variable is calculated from the first two variables. Basically there is no problem to do that. I copy the file with the data of the first variable,

I have a series of nertCDF files containing global data for a particular variable, e.g. tmin/tmax/precipiation/windspeed/relative humuidity/radiation etc. I get the following information when using *nc_open* function in R: datafile: https://www.dropbox.com/s/xpo7zklcmtm3g5r/gfdl_preci.nc?dl=0 File gfdl_preci.nc (NC_FORMAT_NETCDF4_CLASSIC): 1 variables (excluding dimension variables):

On Mon, Aug 14, 2017 at 5:29 AM, <raphael.felber at agroscope.admin.ch> wrote: Dear all > > I'm a newbie regarding netcdf data. Today I realized that I maybe do not > understand some basics of the netcdf. I want to create a *.nc file > containing three variables for Switzerland. All data outside of the country > are NAs. The third variable is calculated from the first two

summary: how to make image.plot print a subtitle between the title and the image, rather than under the image? details: I've got a project https://github.com/TomRoche/ioapi-hack-R that illustrates the use of (et al) the R packages {ncdf4, fields, M3} for processing and visualizing IOAPI data. The data being visualized consists of a series of layers (mostly representing emissions from a

Perhaps this toy example will help: ## example data output <- list(1:5, 1:7, 1:4) lens <- lapply(output, length) maxlen <- max(unlist(lens)) outputmod <- lapply(output, function(x, maxl) c(x, rep(NA, maxl-length(x))), maxl=maxlen) outputmat <- do.call(cbind, outputmod) write.csv(outputmat, na='') The idea is to pad the shorter vectors with NA (missing) before converting

I have connected asterisk 1.0.7 with Avaya Definity via E1 with a TE100P Digium Card. Inbound calls are working perfectly and I dont have any problem. But when I try to make an outgoing call with my softphone (xlite) I am getting the following messages. Hungup 'Zap/13-1' Executing Dial("SIP/IZ-bc0a", "Zap/g1/3118") in new stack Called g1/3118 Channel 0/1, span 1 got

Two questions: 1. Is the order of the dimensions shown what is shown if you look at str(ncin) - I mean shown at the end where it describes the variable and its dimensions? 2. Is you problem how to subset the netcdf file, how to write to the .csv file, or both? -Roy > On Aug 28, 2017, at 2:21 PM, Eeusha Nafi <eshad002 at gmail.com> wrote: > > I have a series of nertCDF files

summary: how to convert a 3D array (as obtained from ncdf4::ncvar_get) to a dataframe suitable for use by lattice::levelplot(), e.g., levelplot(conc ~ lon * lat | lev, data = data.frame) details: I have atmospheric data in netCDF files specifying gas concentrations over a 3D space with dimensions longitude, latitude, and (vertical) level. I need to plot the data by level. Since there are

Hi everyone, I am a newbie in R and in this discussion list. I am trying to use R package "ncdf" to read values of temperature from a NCDF file. I did it before to another file using the function "get.var.ncdf", but now there is an error that I can not solve, and I would really appreciate if you could help me. I am using R version 2.11.1 (2010-05-31) in a machine with Linux

Greetings R users! I am working with the ENSEMBLE climate data (10 min resolution daily temperatures images for all of Europe 1950-2006). The data comes packaged in a single netCDF file. I would like to read the data in and export a subset (2002-2006) as geotiffs (one image per day). So far, I can successfully read in the data and view the images within an R display window. However, I have yet to

On 5 June 2018 at 16:23, <dag at cray.com> wrote: > The name "getSizeExpressionInBits" makes me think that a Value > expression will be returned (something like a ConstantExpr that uses > vscale). I would be surprised to get a pair of integers back. Same here. > If we went the ConstantExpr route and added ConstantExpr support to > ScalarEvolution, then SCEVs

Hi, Now that Sander has committed enough MC support for SVE, here's an updated RFC for variable length vector support with a set of 14 patches (listed at the end) to demonstrate code generation for SVE using the extensions proposed in the RFC. I have some ideas about how to support RISC-V's upcoming extension alongside SVE; I'll send an email with some additional comments on

Hi, Are there any objections to going ahead with this? If not, we'll try to get the patches reviewed and committed after the 7.0 branch occurs. -Graham > On 2 Jul 2018, at 10:53, Graham Hunter <Graham.Hunter at arm.com> wrote: > > Hi, > > I've updated the RFC slightly based on the discussion within the thread, reposted below. Let me know if I've missed