Displaying 20 results from an estimated 700 matches similar to: "Mystery!!!"
2009 Nov 12
1
Substituting vectors into a legend
I have a simple (!) problem. What I want to do is to create a legend with
Greek letters, and substituting numbers into the legend. Like this:
mu=1:3
Mean=rep(mu, each=20)
plot(runif(60), rnorm(60,Mean,0.1), pch=Mean) # create a plot
legend(0.6,1.7, paste("mu =", 1:3), pch=mu)
but with a Greek letter mu.
I think the solution has something to do with substitute() possibly along
with
2011 Feb 20
1
inter-specific competition - community matrices and two species models using Lotka-Volterra
Does anyone know of example r-code/packages for carrying out analysis?
Preferably this would have examples from real experimental data of two or
more competing species...
Thanks
Chris Buddenhagen
[[alternative HTML version deleted]]
2012 Apr 04
1
BRugs crash, question
(Using BRugs 0.7-5, R 2.14.2 32-bit on 64-bit Windows 7, OpenBUGS 3.2.1)
1. BRugs crashes R for me as follows. Sorry about the lack of detail; please let
me know if / how to supply a more useful bug report on this issue.
fit <- BRugsFit(...)
# BRugs and OpenBUGS runs fine, the parameter estimates are reasonable
# across 3 chains
samplesBgr("beta") # crash
2011 Apr 26
2
what's wrong with plot(..., type="p")?
Dear users,
I'm trying to get a dot plot but always end up with a boxplot. Can
someone please tell me what I am doing wrong?
df <- structure(list(FACETTE = structure(c(1L, 1L, 1L, 1L, 2L, 2L,
+ 2L, 2L), .Label = c("base", "tip"), class = "factor"), Sq = c(274836,
+ 0.74182, 0.709205, 0.984552, 279869, 255712, 26566, 301464)), .Names =
c("FACETTE",
2010 Apr 08
1
a small question about R with Winbugs
I try to do a test for dirichlet process for Multivariate normal, but Winbugs
always says "expected multivariate node", does that mean I miss something at
initialization? I will really appreciate the help to solve this problem
Here is the R code, and Winbugs code.
model
{
for(i in 1:N){
y[i,1:2] ~ dmnorm(mu[i,],tau[i,,])
S[i] ~ dcat(pi[])
mu[i,1:2] <- mu.star[S[i],]
2010 Apr 19
1
BRugs
Hi. I am new here, and I am writing this Winbugs code with BRugs.
n=length(bi.bmi)
Lagegp=13
Lgen=2
Lrace=5
Lstra=15
Lpsu=2
#model gen x race
bi.bmi.model=function(){
# likelihood
for (i in 1:n){
bi.bmi[i]~ dbern(p[i])
logit(p[i])<- a0 + a1[agegp[i]]+a2[gen[i]]+a3[race[i]]
+ a12[agegp[i], gen[i]]
+ gam[stra[i]]+ u[psu[i],stra[i]] }
# constraints for a1, a2, a3, a12
a1[1]<-0.0
2018 May 08
0
help with json data from the web into data frame in R
That said, I have two issues to ask for help with:
1) how to ignore cert errors with a fromJSON call
And
2) why the json data from the example link doesn't convert to a data frame. As seen in the following example
library("rjson")
result <- fromJSON(file =
2018 May 08
3
help with json data from the web into data frame in R
> On May 8, 2018, at 9:03 AM, Evans, Richard K. (GRC-H000) <richard.k.evans at nasa.gov> wrote:
>
> That said, I have two issues to ask for help with:
>
> 1) how to ignore cert errors with a fromJSON call
If you can do it with curl, then why aren't you doing one of a) a system call, b) installing and loading RCurl, c) installing and loading curl (the R package with that
2018 May 09
1
help with json data from the web into data frame in R
Regarding the question:
From the linux shell I use the "-k" switch with cURL to ignore cert errors.. is there an equivalent in the R world?
I have (sometimes) had success by creating a .curlrc file and putting the necessary curl options in it. When R invokes curl, curl picks up the options.
[my context was running install.packages( method='curl' ) pointing to a local
2018 May 08
3
help with json data from the web into data frame in R
Hi David, .. I think I've got it :-)
Please let me know if you see anything glaringly wrong with this:
library(RCurl)
zWebObj <- postForm("https://www.semantic-mediawiki.org/w/api.php",
"action" = "ask",
"query" = "[[Category:City]]|?Capital%20of|?Has%20area",
"format" = "json"
.opts = list(ssl.verifypeer =
2018 May 08
0
help with json data from the web into data frame in R
[non-tabular json data] -- ok.. so I think I need to figure out how to make it tabular. Thanks!
[curl] -- I was hoping there was a cleaner way to do it.. using R to evoke cURL to get the data as text and then passing it into getJSON seems to be what I need to do.
Do you by chance have an simple example of using RCurl to get a response ignoring cert errors?
ty
-Rich
-----Original Message-----
2018 May 08
0
help with json data from the web into data frame in R
> On May 8, 2018, at 10:08 AM, Evans, Richard K. (GRC-H000) <richard.k.evans at nasa.gov> wrote:
>
> Hi David, .. I think I've got it :-)
> Please let me know if you see anything glaringly wrong with this:
>
> library(RCurl)
> zWebObj <- postForm("https://www.semantic-mediawiki.org/w/api.php",
> "action" = "ask",
>
2018 May 08
3
help with json data from the web into data frame in R
Right. I'm trying to access a server within my organization which has a cert error that I cannot fix.
The example link I provided was to a site on the web that does not have the cert error.
From the linux shell I use the "-k" switch with cURL to ignore cert errors.. is there an equivalent in the R world?
-Rich
-----Original Message-----
From: David Winsemius [mailto:dwinsemius
2012 Dec 04
1
Reading JSON files from R
Hello All -
I am trying to use RJSONIO to read in some JSON files.
I was wondering if anyone could please comment on the level of complexity of
the files it can be used to read, exports from or directly from NoSQL DBMS
like MongoDB and such.
Also, i understand that in reading the JSON file RJSONIO will automatically
create the necessary structures. However I cannot seem to use to to read the
2020 May 12
1
Segfault on read.socket with long message
Thanks for the link.? Somehow the information about how to join the
bugzilla site was not available at bugzilla and buried in the CRAN web
site instructions on reporting bugs (which pointed me at Bugzilla and
not the page you showed me).
The example is pretty minimal.? I left the tracing statements
(flog.trace()) and the toJSON, fromJSON in as I thought they might
provide some context for
2012 Jun 19
1
need help with unlist(), losing NULL values
Hi,
I have a very rudimentary kind of question on using unlist(). I am
parsing a bunch of JSON text using rjson package. Some data elements in
a dictionary happen to be null which rjson parses correctly.
> fromJSON(json_str='{"query":{"A":10, "B":null, "C":"hello"},
"query":{"A":20, "B":null,
2020 May 11
2
Segfault on read.socket with long message
I'm trying to implement a connection between two processes using a
simple socket mechanism. The messages are rather long object stored as
JSON.
R is crashing with a segmentation fault when I try to read my test
message (which is 5305 bytes long). I first send the length in bytes
and then I send the actual message.
Here is my R code:
library(jsonlite)
library(futile.logger)
2018 May 08
0
help with json data from the web into data frame in R
> On May 8, 2018, at 8:36 AM, Evans, Richard K. (GRC-H000) <richard.k.evans at nasa.gov> wrote:
>
> I?ve been tinkering and discovered that the link I need to read json data from is ?https? and there is a certificate warning that I have to click through from a browser. That might be my issue. Is there any way in the json package to tell it to ignore self-signed cert errors in a
2018 May 08
2
help with json data from the web into data frame in R
I?ve been tinkering and discovered that the link I need to read json data from is ?https? and there is a certificate warning that I have to click through from a browser. That might be my issue. Is there any way in the json package to tell it to ignore self-signed cert errors in a url?
-Rich
From: Eric Berger [mailto:ericjberger at gmail.com]
Sent: Tuesday, May 08, 2018 11:31 AM
To: Evans,
2018 May 08
0
help with json data from the web into data frame in R
Hi Rich,
Take a look at the function fromJSON found in the rjson package.
Note that the Usage in the help page: ?fromJSON
names the second argument 'file' but if you look at the description the
argument can be a URL.
HTH,
Eric
On Tue, May 8, 2018 at 6:16 PM, Evans, Richard K. (GRC-H000) <
richard.k.evans at nasa.gov> wrote:
> Hello
>
> I am able to construct a url that