Displaying 20 results from an estimated 1000 matches similar to: "GAM interactions, by example"
2012 May 29
1
strucchange Fstats() example
Dear all,
I'm trying to understand how the strucchange package is working and I have been looking at the examples given for the Fstats() function.
The first example (Nile), shows one peak in the F-stats and one breakpoint is estimated, that can be plotted using the following code
## Nile data with one breakpoint: the annual flows drop in 1898
## because the first Ashwan dam was built
2009 May 22
1
regrouping factor levels
Hi all,
I had some trouble in?regrouping factor levels for a variable. After some experiments, I have figured out how I can recode to modify the factor levels. I would now like some help to understand why some methods work and others don't.
Here's my code :
rm(list=ls())
###some trials in recoding factor levels
char<-letters[1:10]
fac<-factor(char)
levels(fac)
print(fac)
##first
2010 Apr 21
5
Bugs? when dealing with contrasts
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with
2006 Apr 06
12
net drive mapping not working in login script
I've set the path for each user in pdbedit and created a login script with drive mapping etc etc
The network drives aren't being mapped when I login each user:
smb.conf
[global]
printcap name = cups
cups options = raw
map to guest = Bad User
# include = /etc/samba/dhcp.conf
logon path = \\%L\profiles\.msprofile
logon home = \\%L\%U\.9xprofile
2008 Sep 09
1
How do I compute interactions with anova.mlm ?
Hi,
I wish to compute multivariate test statistics for a within-subjects repeated measures design with anova.mlm.
This works great if I only have two factors, but I don't know how to compute interactions with more than two factors.
I suspect, I have to create a new "grouping" factor and then test with this factor to get these interactions (as it is hinted in R News 2007/2),
but
2011 Oct 03
1
function recode within sapply
Dear List,
I am using function recode, from package car, within sapply, as follows:
L3 <- LETTERS[1:3]
(d <- data.frame(cbind(x = 1, y = 1:10), fac1 = sample(L3, 10,
replace=TRUE), fac2 = sample(L3, 10, replace=TRUE), fac3 = sample(L3,
10, replace=TRUE)))
str(d)
d[, c("fac1", "fac2")] <- sapply(d[, c("fac1", "fac2")], recode,
"c('A',
2007 Oct 17
1
passing arguments to functions within functions
Dear R Users,
I am trying to write a wrapper around summarize and xYplot from Hmisc
and am having trouble understanding how to pass arguments from the
function I am writing to the nested functions.
There must be a way, but I have not been able to figure it out.
An example is below.
Any advice would be greatly appreciated.
Thanks, Dan
# some example data
df=expand.grid(rep=1:4,
2008 Dec 23
6
Interval censored Data in survreg() with zero values!
Hello,
I have interval censored data, censored between (0, 100). I used the
tobit function in the AER package which in turn backs on survreg.
Actually I'm struggling with the distribution. Data is asymmetrically
distributed, so first choice would be a Weibull distribution.
Unfortunately the Weibull doesn't allow for zero values in time data,
as it requires x > 0. So I tried the
2002 Jun 04
2
Scaling on a data.frame
Hey,
hopefully there is an easy way to solve my problem.
All that i think off is lengthy and clumsy.
Given a data.frame d with columns VALUE, FAC1, FAC2, FAC3.
Let FAC1 be something like experiment number,
so that there are exactly the same number of rows for each level of FAC1
in the data.frame.
Now i would like to scale all values according to the center of its
experiment.
So i can apply s
2006 Feb 13
2
?bug? strange factors produced by chron
Hallo all
Please help me. I am lost and do not know what is the problem. I have
a factor called kvartaly.
> attributes(kvartaly)
$levels
[1] "1Q.04" "2Q.04" "3Q.04" "4Q.04" "1Q.05" "2Q.05" "3Q.05" "4Q.05"
$class
[1] "factor"
> mode(kvartaly)
[1] "numeric"
> str(kvartaly)
Factor w/ 8
2012 Nov 29
5
bootstrapped cox regression (rms package)
Hi,
I am trying to convert a colleague from using SPSS to R, but am having
trouble generating a result that is similar enough to a bootstrapped cox
regression analysis that was run in SPSS. I tried unsuccessfully with
bootcens, but have had some success with the bootcov function in the rms
package, which at least generates confidence intervals similar to what is
observed in SPSS. However, the
2012 Nov 29
0
bootstrapped cox regression in rms package (non html!)
Hi,
I am trying to convert a colleague from using SPSS to R, but am having
trouble generating a result that is similar enough to a bootstrapped
cox regression analysis that was run in SPSS. I tried unsuccessfully
with bootcens, but have had some success with the bootcov function in
the rms package, which at least generates confidence intervals similar
to what is observed in SPSS. However, the
2003 Feb 14
2
factorial function
Sorry for the stupid question, but is there the factorial function in
R? I tried to find it using help.search('factorial') but got nothing
appropriate.
Many thanks,
-Serge
2013 Jan 15
1
How to get F values for a Generalized Linear Model?
Dear All,
I have fitted generalized linear models with the glm() function from the package lme4. The statistical values it returns are the z-value and the p-value. Now I am searching for a way to get the F-values for my models to use for reporting - as to my knowledge reporting z-values is not very useful and the F-values together with the p-values would be desired for the report. I tried the
2002 Jun 05
1
[Re: Re: Scaling on a data.frame]
Stefan Roepcke <stefan.roepcke at metagen.de> writes:
> Hey,
>
> hopefully there is an easy way to solve my problem.
> All that i think off is lengthy and clumsy.
>
> Given a data.frame d with columns VALUE, FAC1, FAC2, FAC3.
> Let FAC1 be something like experiment number,
> so that there are exactly the same number of rows for each level of FAC1
> in the
2004 Sep 01
1
obtaining exact p-values in mixed effects model
Hello,
Using a fixed effects linear model (with lm), I can get exact p-values
out of the AVOVA table, even if they are very small, eg. 1.0e-200.
Using lme (linear mixed effects) from the nlme library,
it appears that there is rounding of the p-values to zero, if
the p-value is less than about 1.0e-16. Is there a way we can obtain
the exact p-values from lme without rounding?
used commands:
2012 Apr 02
1
gamm: tensor product and interaction
Hi list,
I'm working with gamm models of this sort, using Simon Wood's mgcv library:
gm<- gamm(Z~te(x,y),data=DATA,random=list(Group=~1))
gm1<-gamm(Z~te(x,y,by=Factor)+Factor,data=DATA,random=list(Group=~1))
with a dataset of about 70000 rows and 110 levels for Group
in order to test whether tensor product smooths vary across factor levels. I was wondering if comparing those two
2006 Jan 23
9
Web Hosting Options?
Can someone recommend a good web host for ROR?
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Posted via http://www.ruby-forum.com/.
2004 May 12
6
Design matrix not identity
Hello again,
I was too quick before. What I was looking for was a function that
constructs the design (or incidence) matrix (X in a linear model) from a
factor. Uwe Ligges suggested using model.matrix and this does almost what I
want, but it is first necessary to construct a data variable. It also asigns
ones to all rows of the first column (because this is set to be the
contrast, not really what
2010 Nov 29
1
surpressing tickmarks / labels x-as for two sets of boxplot (plotted as stacked boxplots)
Hello,
I am trying to plot two sets of boxplots together. These are estimates of two
experiments and?seven?factors.
The results of the two experiments I want to plot as boxplots stacked to each
other.
Therefore I plot first the results of the first experiment; and next with the
add option the second set of boxplots.
The boxplots are plotted at 'at = 1:7 - 0.15 for the first experiment and