Displaying 20 results from an estimated 3000 matches similar to: "Optimizing problem R"
2010 Oct 24
1
Optimize parameters of ODE Problem which is solved numeric
Hi,
I have a data-matrix:
> PID
sato hrs fim health
214 3 4.376430 6.582958 5
193 6 4.361825 3.138525 6
8441 6 4.205771 3.835886 7
7525 6 4.284489 3.245139 6
6806 7 4.168926 2.821833 7
5682 7 1.788707 1.212653 7
5225 6 1.651463 1.436980 7
4845 6 1.692710 1.267359 4
4552 5 1.686448 1.220539 6
2015 Oct 08
2
Pool allocator + safecode
Thanks for the fast response John.
On Thu, Oct 1, 2015, at 04:51 PM, John Criswell wrote:
> Dear Ed,
>
> First, someone has updated the DSA code in the poolalloc project to LLVM
> 3.7, and a Master's student worked for me over the summer to update a
> large chunk of SAFECode to LLVM 3.7. However, the update to LLVM 3.7
> isn't finished (we need to finish integrating
2012 Jul 18
4
The best solver for non-smooth functions?
# Hi all,
# consider the following code (please, run it:
# it's fully working and requires just few minutes
# to finish):
require(CreditMetrics)
require(clusterGeneration)
install.packages("Rdonlp2", repos= c("http://R-Forge.R-project.org",
getOption("repos")))
install.packages("Rsolnp2", repos= c("http://R-Forge.R-project.org",
2007 Oct 10
11
please help me
dear list
I am student M.S. statistics in department statistics . I am working in the function "nls" in the [R 2.3.1] with 246 data and want to fit the "exp" model to vectors( v and u ) but I have
a problem to use it
u
5.000000e-13 2.179057e+03 6.537171e+03 1.089529e+04 1.525340e+04
1.961151e+04 2.396963e+04 2.832774e+04 3.268586e+04 3.704397e+04
4.140209e+04
2010 Jun 26
4
optim() not finding optimal values
I am trying to use optim() to minimize a sum-of-squared deviations function based upon four parameters. The basic function is defined as ...
SPsse <- function(par,B,CPE,SSE.only=TRUE) {
n <- length(B) # get number of years of data
B0 <- par["B0"] # isolate B0 parameter
K <- par["K"]
2007 Feb 11
3
merge words=data name
I would like to merge two parts of words to get a name of the data. First
M3$N (invariable) and second is a number from 0001 to 3003 -
M3$N0001,M3$N0002,...,M3$N3003. For example if I do it like this:
my.data <- paste("M3$N",2456,sep="")
I get
> my.data
[1] "M3$N2456"
But I want to get something equivalent to
my.data<- M3$N2456
Is there any way to do it?
2007 Jul 26
3
substituting dots in the names of the columns (sub, gsub, regexpr)
Dear R users,
I have the following two problems, related to the function sub, grep,
regexpr and similia.
The header of the file(s) I have to import is like this.
c("y (m)", "BD (g/cm3)", "PR (Mpa)", "Ks (m/s)", "SP g./g.", "P
(m3/m3)", "theta1 (g/g)", "theta2 (g/g)", "AWC (g/g)")
To get rid of spaces and
2012 Nov 09
6
(sin asunto)
Saludos, tengo un problema que no puedo resolver dentro del R
Estoy creando una funcion que a partir de un objeto compuesto por diferentes matrices como el que esta a continuacion:
[[1]]
M1 M2 M3 M4
sp1 2 0 1 8
sp2 4 5 2 4
sp3 0 0 4 0
sp4 5 7 5 0
sp5 0 4 0 0
[[2]]
M3 M2 M4 M1
sp1 1 0 8 2
sp2 2 5 4 4
sp3 4 0 0 0
sp4 5 7 0 5
sp5 0 4 0 0
[[3]]
2012 Sep 25
1
REML - quasipoisson
hi
I'm puzzled as to the relation between the REML score computed by gam and
the formula (4) on p.4 here:
http://opus.bath.ac.uk/22707/1/Wood_JRSSB_2011_73_1_3.pdf
I'm ok with this for poisson, or for quasipoisson when phi=1.
However, when phi differs from 1, I'm stuck.
#simulate some data
library(mgcv)
set.seed(1)
x1<-runif(500)
x2<-rnorm(500)
2013 Oct 11
3
[LLVMdev] Generate code for ARM Cortex m0, m3, and m4.
Hi,
I am trying to cross compile code for ARM Cortex m0, m3, and m4.
For m0, I use:
-target armv6--eabi -mcpu=cortex-m0
That seems to work. For m3 and m4, I use the following which does not work
(fatal error: error in backend: CPU: 'cortex-m3' does not support ARM mode):
-target armv7m--eabi -mcpu=cortex-m3
and
-target armv7em--eabi -mcpu=cortex-m4
Who can help me with the
2017 Jun 06
4
integrating 2 lists and a data frame in R
Dear Bert,
thank you for your response. here it is the piece of R code : given 3 data
frames below ---
N <- data.frame(N=c("n1","n2","n3","n4"))
M <- data.frame(M=c("m1","m2","m3","m4","m5"))
C <- data.frame(n=c("n1","n2","n3"),
2010 Dec 11
2
Predator Prey Models
Dear R-users,
I am currently modifying a previously developed predator prey model and
was curious if there was a way to add in a disturbance to the model (let's
say at time t=100). The disturbance can be the introduction of 40 prey
(N=40) and 10 predators (Pred = 10). I would like to see my model go from a
state of equilibrium (up to t = 99), show this disturbance (at t = 100) and
then
2012 Mar 21
2
Type II and III sum of squares (R and SPSS)
To whom it may concern
I made some analysis with R using the command Anova. However, I found
some problmes with the output obtained by selecting type II o type III
sum of squares.
Briefly, I have to do a 2x3 mixed model anova, wherein the first factor
is a between factor and the second factor is a within factor. I use the
command Anova in the list below, because I want to obtain also the sum
2017 Jun 06
0
integrating 2 lists and a data frame in R
Hi Bogdan,
Kinda messy, but:
N <- data.frame(N=c("n1","n2","n3","n4"))
M <- data.frame(M=c("m1","m2","m3","m4","m5"))
C <- data.frame(n=c("n1","n2","n3"), m=c("m1","m1","m3"), I=c(100,300,400))
2009 Aug 17
1
[Fwd: Re: R code to reproduce (while studying) Bates & Watts 1988]]]
Kevin Wright wrote:
> library(nlme)
> m2 <- gnls(conc ~ t1*(1-t2*exp(-k*time)),
> data = df.Chloride,
> start = list(
> t1 = 35,
> t2 = 0.91,
> k = 0.22))
So my error was to use nls instead that gnls. Thanks a lot, Kevin.
> summary(m2)
> plot(m2)
> lag.plot(resid(m2), do.lines=FALSE)
>
2013 Sep 05
2
binary symmetric matrix combination
Hi,
May be this helps:
m1<- as.matrix(read.table(text="
y1 g24
y1 0 1
g24 1 0
",sep="",header=TRUE))
m2<-as.matrix(read.table(text="y1 c1 c2 l17
?y1 0 1 1 1
?c1 1 0 1 1
?c2 1 1 0 1
?l17 1 1 1 0",sep="",header=TRUE))
m3<- as.matrix(read.table(text="y1 h4??? s2???? s30
?y1 0 1 1 1
?h4 1 0 1 1
?s2 1 1 0 1
?s30 1 1 1
2017 Jun 06
2
integrating 2 lists and a data frame in R
> On Jun 6, 2017, at 4:01 AM, Jim Lemon <drjimlemon at gmail.com> wrote:
>
> Hi Bogdan,
> Kinda messy, but:
>
> N <- data.frame(N=c("n1","n2","n3","n4"))
> M <- data.frame(M=c("m1","m2","m3","m4","m5"))
> C <-
2012 Jul 18
2
[LLVMdev] Setting up a cross-compiler for cortex-m3
On 18 July 2012 14:33, salvatore benedetto
<salvatore.benedetto at gmail.com> wrote:
> but I still haven't figure out how to build for cortex-m3
>
> clang -march=armv7-m -mfloat-abi=soft <something missing?> testReference.cpp -c
-march should have done the trick.
You can also try -mcpu=cortex-m3,
or try -ccc-host-triple armv7m-none-gnueabi (or -eabi),
and possibly
2011 Dec 03
1
partial mantel tests in ecodist with intential NA values.
I would like to perform partial mantel tests on only within group values, with "between group" values assigned to NA.
This is possible in package ncf partial.mantel.test, however this sues a different permutation to that used in ecodist.ecodist will not accept data with NA values, returning a "matrix is not square error.
is it possible to perform this test in ecodist?
many thanks
2011 Mar 08
1
SEM error
Dear All,
I am new for R and SEM. I try to fit the model with Y (ordinal outcome), X
(4 categorical data), M1-M3 (continuous), and 2 covariates (Age&sex) as a
diagram.
library(polycor)
model.ly <-specify.model()
1: x -> m1, gam11, NA
2: x -> m2, gam12, NA
3: x -> m3, gam13, NA
4: age -> m1, gam14, NA
5: age -> m2, gam15, NA
6: age -> m3, gam16, NA
7: sex -> m1,