similar to: Byte compilation of packages on CRAN

When I run R CMD check on the survival package I invariably get a note: ... * checking for file ?survival/DESCRIPTION? ... OK * this is package ?survival? version ?3.2-6? * checking CRAN incoming feasibility ... NOTE Maintainer: ?Terry M Therneau <therneau.terry at mayo.edu>? ... This is sufficient for the auto-check process to return the following failure message: Dear maintainer,

Hi, In the DESCRIPTION file the ByteCompile and LazyLoading arguments appear to accept any value. >From the manual the field should be a "logical field". However, authors interpret this in a variety of ways: unique(tools::CRAN_package_db()$ByteCompile) # [1] NA "TRUE" "yes" "true" "Yes" "no" #

Dear developeRs, I've searched the documentation, FAQ, and mailing lists, but haven't found the answer(*) to the following: When should one specify LazyLoad, LazyData, and ZipData? And what is the default if they are left unspecified? (*)Except that 1) If the package you are writing uses the methods package, specify LazyLoad: yes, and 2) The optional ZipData field controls whether the

Dear all, I'm experiencing an unusual installation error for one package. Could anyone suggest how I can best investigate this from here please? I'm sorry this isn't very much to go on. Hopefully someone can point me in the right direction. The problem seems to be my library. It is large (3,418 packages) and I'd like to avoid rebuilding it, if possible. All packages are up to

I added a new data file, NLSY.RData, to a package that uses LazyData: Yes It passed R CRAN check and R CMD install worked w/o significant complaints. * installing to library 'C:/R/R-2.15.2/library' * installing *source* package 'heplots' ... ** R ** data ** moving datasets to lazyload DB ** demo ** inst ** preparing package for lazy loading Warning: package 'nnet' was

Getting a very strange error with a new install of R from source on x86; make[3]: Leaving directory `/tmp/R.INSTALL.r20887/cluster/src' ** R ** data ** moving datasets to lazyload DB Error in factor(c(1, 2, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1), : invalid labels; length 2 should be 1 or 1 Execution halted ERROR: lazydata failed for package 'cluster' ** Removing

[Using R 2.7.2 on Windows XP] After re-building our heplots package, I've begun to get the following error from sessionInfo(), even though it passes R CMD check and builds without errors: > sessionInfo() Error in x$Priority : $ operator is invalid for atomic vectors In addition: Warning message: In FUN(c("MASS", "heplots", "car", "rgl",

Hello, I would like to the use the 'ByteCompile' field in R 2.14. However, "Writing R Extensions" only describes this field, but does not say what value it should be set to. How should i use it? Do you have examples? Is it the same as "LazyData: yes"? Thank you, Slava

On 05/10/2015 8:25 PM, Matt Dowle wrote: > > On Mon, Oct 5, 2015 at 4:57 PM, Duncan Murdoch <murdoch.duncan at gmail.com > <mailto:murdoch.duncan at gmail.com>> wrote: > > On 05/10/2015 7:24 PM, Matt Dowle wrote: > > Joris Meys <jorismeys <at> gmail.com <http://gmail.com>> writes: > > > >> > >> Hi all,

Hi, On Windows, package files in the inst/ subdir are installed after the lazyload creation. This differs from Linux where inst/ is installed _before_ lazyload creation. Since packages may need data in inst, I think the order on Windows should be changed. Perhaps like this: diff --git a/src/gnuwin32/MakePkg b/src/gnuwin32/MakePkg index 57af321..868e8f1 100644 --- a/src/gnuwin32/MakePkg +++

Hi, I think I've found a bug in R CMD INSTALL. When it tries to parse a DESCRIPTION file with an invalid LazyData field, it errors out while trying to print the correct error message: > R CMD INSTALL . * installing to library ?/home/example/R/x86_64-pc-linux-gnu-library/3.4? * installing *source* package ?samplepackage? ... ** data Error in errmsg("invalid value of ", field,

Using SUSE Linux, Windows 32 bit and Windows 64 bit R 3.0.2 , I am unable to use R CMD check successfully. Here is the Windows 64 bit report: Z:\R\source\effects>R CMD check pkg * using log directory 'Z:/R/source/effects/pkg.Rcheck' * using R version 3.0.2 (2013-09-25) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file

I am unable to calculate confidence intervals for the slope estimate in a quasibinomial glm using confint(). Below is the output and the package info for MASS. Thanks in advance! R 2.9.2 MASS 7.2-48 > confint(glm.palive.0.str) Waiting for profiling to be done... Error: dims [product 37] do not match the length of object [74] > glm.palive.0.str Call: glm(formula = cbind(alive, red) ~ str,

On 05/10/2015 7:24 PM, Matt Dowle wrote: > Joris Meys <jorismeys <at> gmail.com> writes: > >> >> Hi all, >> >> I have a puzzling problem related to nchar. In R 3.2.1, the internal > nchar >> gained an extra argument (see >> https://stat.ethz.ch/pipermail/r-announce/2015/000586.html) >> >> I've been testing code using the

I am developing a package that imports some functions from another package. The imported package (qcc) does not have a namespace and this is causing problems with loading of my package, which has a namespace. Is there a workaround to allow loading the namespace-less package? I searched the archives and found a suggestion that the package should be included in the Depends list, but this has not

Hello, I am interested in using nlme to model repeated measurements, but I don't seem to get good CIs. With the code below I tried to generate data sets according to the model given by equations (1.4) and (1.5) on pages 7 and 8 of Pinheiro and Bates 2000 (having chosen values for beta, sigma.b and sigma similar to those estimated in the text). For each data set I used lme() to fit a model,

Have been running samba successfully authenticating to a windows 2003 domain since 3.0.1. Starting in 3.0.23 and 3.0.23b I can't do a "net ads join" on a HPUX itanium server running 11.23 ia64. I can kinit just fine w/ this userid. Samba was built with gcc 4.1.1. See below: root@serv00 # kinit jjurich_wa Password for jjurich_wa@DIVMS.UIOWA.EDU: root@serv00 #

Dear list members, I'm trying to use the lazy data mechanism with the car package, so far without success. The data sets are in the source package's data subdirectory in the form of compressed .rda files, and I added the directive LazyData: yes to the package's DESCRIPTION file. I suspect that the problem is that the package has no namespace, but I've been unable to find a

Hi, The following function works, but is there a neater way to write it? f = function(x,...) { # return a character vector of the arguments passed in after 'x' gsub(" ","",unlist(strsplit(deparse(substitute(list(...))),"[(,)]")))[-1] } > f(x,a,b,c*d) [1] "a" "b" "c*d" > Thanks. [[alternative HTML

On 18/02/2019 4:08 p.m., Matt Dowle wrote: > Dear all, > > I'm experiencing an unusual installation error for one package. Could > anyone suggest how I can best investigate this from here please? I'm sorry > this isn't very much to go on. Hopefully someone can point me in the right > direction. When packages are installed, a hidden environment is created called