similar to: Display instruction text on package load

Dear Thomas, it is, unfortunately, not that simple. t.test() returns an object of class "htest" and not all such objects have standard errors. I'm not entirely sure what the point is since it's easy to compute the standard error of the difference from the information in the object (adapting an example from ?t.test): > (res <- t.test(1:10, y = c(7:20))) Welch Two Sample

I am trying to install R on CentOS (either 7 or 8, behavior is the same) in an environment behind a firewall and while I am able to run: R CMD make check I am unable to run: R CMD make check-devel These latter tests fail. The failure occurs in the internet access if() conditional statement in these two tests: https://svn.r-project.org/R/trunk/tests/internet.R

>>>>> peter dalgaard >>>>> on Fri, 22 Feb 2019 12:38:14 +0100 writes: > It's not a problem per se to put additional information > into class htest objects (hey, it's S3 after all...) and > there is a precedent in chisq.test which returns $observed > and $expected. It seems the consent is to simply return the SE but *not*

Hi everyone, This is about documentation for the model.frame() page. The get_all_vars() function (added in R 2.5.0) is a great addition, but the behavior of its '...' argument is different from that of model.frame() with which it is documented and this creates ambiguity. The current docs read: \item{\dots}{further arguments such as \code{data}, \code{na.action}, \code{subset}. Any

It's disappointing that many packages do not have a NEWS file. Perhaps CRAN should require NEWS or CHANGELOG, as long as the system is being reformed to potentially accommodate markdown anyway. -Thomas Thomas J. Leeper http://www.thomasleeper.com On Fri, Jun 5, 2015 at 12:00 PM, <r-devel-request at r-project.org> wrote: > Date: Thu, 04 Jun 2015 12:39:34 -0400 > From: Duncan

Dear all, My gRbase package imports functionality from the bioconductor packages graph, Rgraphviz and RBGL. To make installation of gRbase easy, I would like to have these bioconductor packages installed in connection with installation of gRbase, but to do so the user must use setRepositories() to make sure that R also installs packages from bioconductor. Having to call setRepositories causes

Hi John, Thanks for your reply. Of course I could write a package and of course I would find that trivial to do. The point is this is a main entry point to R for probably (at this point) hundreds of thousands of students. I?d like them to be able to get a basic quantity of interest from a t-test without four subsequent function calls. I also don?t really see the point about the object class,

I want to load an in-house library 'differently' in a particular context and, to achieve this, would like to govern the behaviour of its .onLoad() function. In a related context, Frank Harrell and I have been wondering on and off about how to tell Hmisc to be less verbose in certain situations. He achieves this by placing information in a custom field in options(). I could do the same

It's not a problem per se to put additional information into class htest objects (hey, it's S3 after all...) and there is a precedent in chisq.test which returns $observed and $expected. Getting such information printed by print.htest is more tricky, although it might be possible to (ab)use the $estimate slot. The further question is whether one would really want to do that (change the

h?, I am preparing undergraduate thesis If you help me this would make me feel good. First I need to analyze effect of Dow Jones Industrial average(DJIA)'s return on Istanbul Stock Exchange(ISE). I want to use Markov-Switching Bayesian Vector Autoregression Models (MSBVAR) that is used to examine the effect of a large economy?s stock exchange movement on a small economy?s stock exchange

I believe the implementation of utils::URLencode is non-compliant with RFC 3986, which it claims to implement (http://tools.ietf.org/html/rfc3986). Specifically, its percent encoding uses lowercase letters a-f, which it should use uppercase letters A-F. Here's what URLencode currently produces: library("utils") URLencode("*+,;=:/?", reserved = TRUE) #

hello all I am using the R package Zelig for some tobit regression with robust standard errors. I have got R version 2.9.2 (2009-08-24) and Zelig Version: 3.4-5 when i do demo(robust) It ends like this way data(coalition) > # Fit the model with robust standard error > user.prompt() Press <return> to continue: > z.out3 <- zelig(Surv(duration, ciep12) ~ polar + numst2 +

Hello again, It appears that get_all_vars() incorrectly handles model formulae that use a right-hand side (rhs) matrix. For example, consider these two substantively identical models: # model using named variables mpg <- mtcars$mpg wt <- mtcars$wt hp <- mtcars$hp m1 <- lm(mpg ~ wt + hp) # model using matrix y <- mtcars$mpg x <- cbind(mtcars$wt, mtcars$hp) m2 <- lm(y ~ x)

On 05/06/2015 8:16 AM, Thomas J. Leeper wrote: > It's disappointing that many packages do not have a NEWS file. Perhaps > CRAN should require NEWS or CHANGELOG, as long as the system is being > reformed to potentially accommodate markdown anyway. I think we should all be careful about suggesting work for other people. This would be a huge amount of work, probably hundreds of hours

Hi, I am facing with a strange behaviour of isClass and extends when these are called in .onLoad in both R 2.12.1 and R 2.13.0. This is preventing my package from doing some object initializations at a proper place (i.e. in .onLoad). Suppose one defines two S4 classes in a package, and that one needs to check the inheritance between these two when loading the package (e.g. to validate slots

Hi, I'm having problems with the Zelig package - when using the below R displays the follwing message (I'm running R i386 2.15.3 for Windows and have updated all the Zelig packages): z.out<-zelig(Surv(psurv2, pcens2) ~ ren_sup3 + age, data=data_urgent, model="coxph") ** The model "coxph" is not available with the currently loaded packages, ** and is not an

Hi R-devels, in "Writing R extensions" as well as in the help to .onAttach(), you mention that one could use this function to issue a start-up message/banner for the package. My little wish for Easter: a 'quietly'-type argument for .onAttach() / .First.lib() which is passed through by functions require() and library() respectively, and by means of which one could optionally

Whereas it is true that one has to contact GitHub to detach a GitHub repository, it really is no problem (or at least was no problem in 2016). I wanted to do so when I took over the maintainer role of LaplacesDemon which only remained on GitHub as a fork on some other person's private account. So I forked and then contacted GitHub support and simply asked them to remove the "forked

The following helps identify when .GlobalEnv$.Random.seed has changed: rng_tracker <- local({ last <- .GlobalEnv$.Random.seed function(...) { curr <- .GlobalEnv$.Random.seed if (!identical(curr, last)) { warning(".Random.seed changed") last <<- curr } TRUE } }) addTaskCallback(rng_tracker, name = "RNG tracker") EXAMPLE: >

Hello, I am writing as an administrator, not as an R user, so forgive me if I am not completely knowledgeable about R. I have a user who is creating an R package for windows from a Linux environment using the crossbuild environment by Jun Yan and A.J. Rossini. The packages she generated worked fine until she tried to install in R 1.9.1 for Windows. Now when she installs with