similar to: rjags error. Error parsing model file:,syntax error on line 5 near ""

Displaying 20 results from an estimated 400 matches similar to: "rjags error. Error parsing model file:,syntax error on line 5 near """

2011 May 27
1
Error with BRugs 0.53 and 0.71, on Win7 with R 2.12.2 and 2.13.0 (crashes R GUI)
I've run into persistent problems with OpenBUGS crashing when using BRugs .53 and .71, and am hoping someone has suggestions. There is obviously something unusual going on in my environment, but I'm at a loss as to where to begin to try to solve it. In a nutshell, what happens is that, as soon as I call "modelCheck()" in BRugs, it gets an error or crashes ... but only some of
2010 Jul 24
0
[PATCH] chain.c: allocation fixes
1) At the end of main, there's attempt to free cur_part->record, which rarely comes from malloc. Only valid case is if gpt handover was performed and chaining was not successful (cur_part->record is overwritten with gpt specifc handover record). Freeing the handover area has been adjusted. 2) If our current iterator is ebr, parent wouldn't be freed at the end of main. Added generic
2009 Feb 08
1
Error installing rjags in Ubuntu Linux
Hi, Here is a step-by-step guide to exactly how I've installed R in Ubuntu: http://www.nabble.com/installing-R-on-Ubuntu-td10025949.html#a21894865 Regarding rjags, here is what happened: This webpage (http://yusung.blogspot.com/2009/01/install-jags-and-rjags-in-fedora.html) recommends logging into R as sudo R, and then typing: install.packages("rjags",
2010 Aug 27
2
Problems loading rjags in R 2.11.0 under OS X 10.5.8
Dear list members, I'm trying to use JAGS 2.1.0 from within R but every time I try to load the rjags package I receive the following message: Loading required package: coda Loading required package: lattice Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared library
2007 May 17
1
[PATCH] ocfs: use list_for_each_entry where benefical
Signed-off-by: Christoph Hellwig <hch@lst.de> Index: linux-2.6/fs/ocfs2/cluster/tcp.c =================================================================== --- linux-2.6.orig/fs/ocfs2/cluster/tcp.c 2007-05-06 13:51:17.000000000 +0200 +++ linux-2.6/fs/ocfs2/cluster/tcp.c 2007-05-17 15:00:14.000000000 +0200 @@ -261,14 +261,12 @@ out: static void o2net_complete_nodes_nsw(struct o2net_node
2011 Sep 16
1
cannot load rjags package on Mac
Dear list, I ran into problem trying to load rjags on my Macbook Air running OS X 10.7.1. I installed JAGS 3.1.0 through binary and it seems OK. $ jags Welcome to JAGS 3.1.0 on Fri Sep 16 13:27:03 2011 JAGS is free software and comes with ABSOLUTELY NO WARRANTY Loading module: basemod: ok Loading module: bugs: ok Then I installed rjags through CRAN, >
2003 Mar 31
4
Convert char vector to numeric table
I'm a great fan of read.table(), but this time the data had a lot of cruft. So I used readLines() and editted the char vector to eventually get something like this: " 23.4 1.5 4.2" " 19.1 2.2 4.1" and so on. To get that into a 3 col numeric table, I first just used: writeLines(data,"tempfile")
2009 Oct 07
1
Unable to load rjags
I am trying to install rjags. Although I can install the library, I cannot load the package. See below. Here is my session > sessionInfo() R version 2.9.2 (2009-08-24) i386-pc-mingw32 locale: LC_COLLATE=English_United States.1252;LC_CTYPE=English_United States.1252;LC_MONETARY=English_United States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252 attached base packages: [1] stats
2011 May 12
1
can't run rjags package in R project
i've windows 7 64 bit operating system i run latest jags backage 2.2 i make set enviroment variable for JAGS_home because the rjags in r program couldn't see the JAGS sw now the error is the following: Error : .onLoad failed in loadNamespace() for 'rjags', details: call: inDL(x, as.logical(local), as.logical(now), ...) error: unable to load shared object 'D:/Program
2015 Oct 28
2
r-cran-rjags installation problems?
Hi list, >From a vanilla debian:testing machine (e.g. docker run -ti debian:testing bash) I install `r-cran-rjags`, which appears to install fine. However, attempting to actually load the library in R produces the following error: library(rjags) Loading required package: coda Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath,
2015 Oct 28
0
r-cran-rjags installation problems?
On 28 October 2015 at 16:22, Carl Boettiger wrote: | Hi list, | | >From a vanilla debian:testing machine (e.g. docker run -ti debian:testing | bash) I install `r-cran-rjags`, which appears to install fine. However, | attempting to actually load the library in R produces the following error: | | library(rjags) Loading required package: coda Error : .onLoad failed in | loadNamespace() for
2010 May 27
3
rjags in Ubuntu 10.04
I've not been able to install rjags successfully in Ubuntu 10.04 : ** testing if installed package can be loaded Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared library '/home/scott/R/i486-pc-linux-gnu-library/2.11/rjags/libs/rjags.so': libjags.so.2: cannot open shared object file:
2008 Nov 08
3
unable to install rjags on 64-bit Debian Linux (etch)
While I have been able to install rjags on my Windows computer, oddly I have been unable to install rjags successfully on my 64-bit Linux compute server (etch, Linux kernel 2.6.18). I am required to specify the JAGS module directory upon installation; when doing this within R, I get:
2011 Dec 08
1
rjags in a Windows 7 64 bits machine
Hi. I was trying to follow this rjags tutorial (example 1): http://www.johnmyleswhite.com/notebook/2010/08/20/using-jags-in-r-with-the-rjags-package/comment-page-1/#comment-19468 But when I try to run the following line in R, R crushes and close. jags <- jags.model('example1.bug', data = list('x' = x,'N' = N), n.chains = 4, n.adapt = 100) I'm using a Windows 64
2009 Apr 30
0
problems installing rjags | tcltk
Greetings. Running Fedora Cora 8 on multi-Opteron system - full 32- and 64-bit libs installed (R compiled 64-bit on this machine). R 2.9.0 - libs sitting in /usr/local/lib64/R/library. Trying to install JAGS, with rjags. Partial success. For JAGS install: |./configure --with-jags-modules=/usr/local/lib/JAGS/modules --libdir=/usr/local/lib64 make make check make install Seems to work / no
2012 Jan 10
1
rjags installation trouble
Trying to install latest rjags (3-5) from CRAN with JAGS 3.2.0 installed on Ubuntu 10.04, with r-devel ... the bottom line is that it fails while loading with /libs/rjags.so: undefined symbol: _ZN7Console15checkAdaptationERb Has anyone else seen this or is it a glitch somewhere in my system? thanks Ben Bolker ================== bolker at ubuntu-10-new:~/R/pkgs/rjags$ jags Welcome to
2012 Sep 20
1
rjags install on Ubuntu 10.04
I have been having trouble with rjags on Ubuntu 10.04 > library(rjags) Loading required package: coda Loading required package: lattice linking to JAGS 3.2.0 module basemod loaded Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file) error: unable to load shared object '/usr/lib/JAGS/modules-3/bugs.so': /usr/lib/JAGS/modules-3/bugs.so:
2012 Nov 25
1
rjags and parallel chains
Hello, I have a fairly complex hierarchical model that I using rjags to fit. Short test runs verify that it works and everything appears to be setup correctly. Now that I want to collect a larger sample from the posterior (5,000 or more). This looks like it will take several days to run on my hardware (Intel core i7, 16GB RAM) I read in the rjags documentation that there is an option for
2008 Jun 25
1
dgamma in WinBUGS and JAGS (rjags)
Hello, In WinBUGS 1.4 manual (http://www.mrc-bsu.cam.ac.uk/bugs/winbugs/manual14.pdf), the gamma density is presented as dgamma(r,mu) where r and mu are the shape and rate parameters, respectively. In JAGS (rjags) manual version 1.0.2, May 9, 2008 (http://www-fis.iarc.fr/~martyn/software/jags/jags_user_manual.pdf), on page 26 the gamma density is presented as dgamma(mu,r) instead of dgamma(r,mu).
2013 Feb 20
2
xyplot help
I am ploting gridded time series data. I would like the actual lat and lon value appear on the graph-if possible inside the graph as numbers. If there is also more elegant ways to plot the graphs I will appreciate more suggestions. ################################# library(ggplot2) library(lattice) month <- c("Jan", "Feb", "Mar", "Apr", "May",