similar to: finding the MLEs of IG parameters by EM-Alorithm

I am trying to use the optim command to get the MLEs for a number of parameters based on some data. Is it possible to write a program that maximizes the likelihood and stores the parameters (many times)? I need to do this a lot of times, each time the data will be updated with more entries (rows). I need to see how the new data is affecting the previous parameter estimates of the model. What is

On Sun, May 26, 2019 at 4:06 AM Michael Chirico <michaelchirico4 at gmail.com> wrote: > > Have finally managed to come up with a fix after checking out sys.calls() > from within the as.Date.IDate debugger, which shows something like: > > [[1]] rbind(DF, DF) > [[2]] rbind(deparse.level, ...) > [[3]] `[<-`(`*tmp*`, ri, value = 18042L) > [[4]] `[<-.Date`(`*tmp*`,

Yes, thanks for following up on thread here. And thanks again for clearing things up, your email was a finger snap of clarity on the whole issue. I'll add that actually it was data.table's code at fault on the storage conversion -- note that if you use an arbitrary sub-class 'foo' with no methods defined, it'll stay integer. That's because [<- calls as.Date and then

I thought it would be good to summarize my thoughts, since I made a few hypotheses that turned out to be false. This isn't a bug in base R, in either rbind() or `[<-.Date`. To summarize the root cause: base::rbind.data.frame() calls `[<-` for each column of the data.frame, and there is no `[<-.IDate` method to ensure the replacement value is converted to integer. And, in fact,

Hi, The following was already a topic on r-help, but after understanding what is going on, I think it fits better in r-devel. The problem is this: When a data.frame has another data.frame in it, rbind doesn't work well. Here is an example: -- > a=data.frame(x=1:10,y=1:10) > b=data.frame(z=1:10) > b$a=a > b z a.x a.y 1 1 1 1 2 2 2 2 3 3 3 3 4 4 4 4 5

Hello, I was asked to try the following code on R, gamma.mles function (xx,shape0,rate0) { n<- length(xx) xbar<- mean(xx) logxbar<- mean(log(xx)) theta<-c(shape0,rate0) repeat { theta0<- theta shape<- theta0[1] rate<- theta0[2] S<- n*matrix(c(log(rate)-digamma(shape)+logxbar,shape/rate-xbar),ncol=1) I<- n*matrix(c(trigamma(shape),-1/rate,-1/rate,shape/rate^2),ncol=2)

Hi, I am tring to write a loop to compute this, ========================== x1=c( rep(-1,4), rep(1,4) ) x2=c( rep(c(-1,-1,1,1),2) ) x3=c( rep(c(-1,1),4) ) x1*x2 x1*x3 x2*x3 ======================== suppose i have x1,x2,x3 i want to compute their ' two factor interactions', x1x2,x1x3 and x2x3, I wrote ======================== for(i in 1:2){ for( j in i+1:3){ xij=c()

Given X1,...,Xn ~ t_k(mu,sigma) student t distribution with k degrees of freedom, mean mu and standard deviation sigma, I want to obtain the MLEs of the three parameters (mu, sigma and k). When I try traditional optimization techniques I don't find the MLEs. Usually I just get k->infty. Does anybody know of any algorithms/functions in R that can help me obtain the MLEs? I am especially

The compositional data xi=(x_i1,x_i2,...,x_in), for each fixed i , xij>0, and sum(xij)=1; I want to compare the mean( u_i) of several groups i.e. H0: u_1=u_2=...=u_N or H0: u_11=u_21=...=u_N1 Are there any ANOVA tpye tools to do this work in R? Thanks, WEN S Q [[alternative HTML version deleted]]

Hello. Here is my R code. I used the functional data . Now I need to use the functional data by applying the kernels instead of the xi, yi functions. Bonjour. Voici mon code en R . J'ai utiliser les donn?es fonctionnelles . Maintenant j'ai besoin d'utiliser les donn?es fonctionnelles en appliquant les noyaux ? la place des fontions xi, yi library(MASS)

Good evening dear administrators, It is with pleasure that I am writing to you to ask for help to finalize my R programming algorithm. Indeed, I attach this note to my code which deals with a case of independence test statistic . My request is to introduce the kernels using the functional data for this same code that I am sending you. So I list the lines for which we need to introduce the

This is a very basic question, but I am a bit confused with optim. I want to get the MLEs using optim which could replace the newton-raphson code I have below which also gives the MLEs. The function takes as input a vector x denoting whether a respondent answered an item correctly (x=1) or not (x=0). It also takes as input a vector b_vector, and these are parameters of test items (Rasch estimates

This is a eaeir way to ask my prior question: I want to caculate how many an exact day of the month there is between two dates. For example; How many 7th of the month is there between "1998/12/17" and "2000/1/7". To make the problem simple, the day of the month (7) is the day in the 2nd date.

Hm. Google tells me that kernel function is in stats package which comes with base installation and is invoked when you start R. search() [1] ".GlobalEnv" "package:stats" "package:graphics" [4] "package:grDevices" "package:utils" "package:datasets" [7] "package:methods" "Autoloads"

Dear all: Assume I have 3 distributions, x1, x2, and x3. x1 ~ normal(mu1, sd1) x2 ~ normal(mu2, sd2) x3 ~ normal(mu3, sd3) y1 = x1 + x2 y2 = x1 + x3 Now that the data I can observed is only y1 and y2. It is easy to estimate (mu1+m2), (mu1+mu3), (sd1^2+sd2^2) and (sd1^2+sd3^2) by EM algorithm since y1 ~ normal(mu1+mu2, sqrt(sd1^2+sd2^2)) and y2 ~ normal(mu1+mu3, sqrt(sd1^2+sd3^2)) However, I want

What do you *mean* "when you want to use the kernels". WHICH kernels? Use to do WHAT? In your browser, visit cran.r-project.org then select "Packages" from the list on the left. Then pick the alphabetic list. Now search for 'kernel'. You will find dozens of matches. On Wed, 14 Oct 2020 at 05:15, PIKAL Petr <petr.pikal at precheza.cz> wrote: > Hm. Google tells

may some one please help me to sort this out, i am trying to writ a R code for calculating the frequencies of the amino acids in 9 different sequences, i want the code to read the sequence from external text file, i used the following code to do so: x<-read.table("sequence.txt",header=FALSE) then i defined an array for 20 amino acids as following:

I have a function that is an iterative process for estimating some MLEs. I want to print some progress to screen as the process iterates. I would like to try and line things up nicely in the R window, but am not sure the best way to do this. Below is a toy example. Suppose I want the value of 10 to be just below "iteration" and the value of -1234 to be just below 'Log

Hello£¬experts I am working on a simulation of effect of artificial selection on certain population in Animal Breeding.I am new beginner in coding. I have already build a matrix A(500*500) based on this code A<-matrix(,500,500) for(i in 1:500){ for(j in 1:500){ ifelse(i==j,A[i,j]<-1,A[i,j]<-0) } } and I need to caculate A2 base on A and X1(4500*4500).Here are the codes

On Mon, Sep 02, 2013 at 09:21:48AM +0800, jiangwen jiang wrote: > TfIdfWeight and BM25(b=0) also need wdf_upper_bound, it is not exists in > Lucene backends. If you don't provide an implementation of wdf_upper_bound(), the default is to use the collection frequency of the term, so provided that information is available in the lucene files, the lack of wdf_upper_bound information