Displaying 18 results from an estimated 18 matches similar to: "Lattice/"panel.bwplot" and Gviz: Boxplot question"
2011 Mar 31
2
That dreaded floating point trap
Hi,
I had a piece of code which looped over a decimal vector like this:
for( i in where ){
thisdata <- subset(herde, herde$mlr >= i)
# do stuff with thisdata..
}
'where' is a vector like seq(-1, 1, by=0.1)
My problem was: 'nrow(thisdata)' in loop repetition 0.4 was different if
'where' was seq(-1, 1, by=0.1) than when 'where' was seq(-0.8, 1,
2012 Feb 16
2
Problem building up ggplot graph in a loop.
Folks,
I want to automate some graphing using ggplot.
Here is my code
graphChargeOffs2<-function(coffs) {
ggplot(coffs, aes(levels))
dataNames<-names(coffs)[!names(coffs) == "levels"]
for(i in dataNames) {
thisData<-coffs[[i]]
last_plot() + geom_line(aes(y = thisData, colour = i))
}
last_plot() + ylab("Total Chargeoffs")
}
coffs is a data.frame.
2007 Jul 21
1
[off?] Amule and d4X ??
Hi all,
I'm trying to use centos5 as desktop/development machine, but i having a
lot of problems to compile Amule and d4X, tools that I use a lot.
Somebody have some experience to do this work?? sombody have an .spec file??
thanks a lot !
JC J?nior
Ps. yes I have all lib neccessari to build this tools.
2012 Apr 25
0
FW: [BioC] Overlay Gene Expression on SNP (copy number) data
Dear All,
Thank you kindly for such detailed replies. I was looking to overlay data using algorithms so that i am able to tell which genes are differentially expressed due to changes in copy number. I did a pubmed search and found only 7 literature pieces all of which use in-house algorithms. I am yet to explore Gviz since it wouldn't work on R 2.14, would try it after upgrading to R 2.15.
2012 Apr 23
2
Overlay Gene Expression on SNP (copy number) data
Hello,
Can anyone please suggest any packages in R that can be used to overlay gene expression data on SNP (affymetrix) copy number ?
Thanks,
Ekta
Senior Research Associate
Bioinformatics Department
Jubilant Biosys Pvt Ltd,
#96, Industrial Suburb, 2nd Stage
Yeshwantpur, Bangalore 560 022
Ph No : +91-80-66628346
The information contained in this electronic message and in any attachments to this
2011 Jun 11
7
C6 LiveCD top 5 apps
Regarding http://twitter.com/CentOS/statuses/79336297579282432
I don't have a twitter account so I'm spamming the list since it looks on
topic :)
I'd like to see on the LiveCD the following:
1. latest dd_rescue
2. latest gparted
3. ntfs-3g
4. screen
5. mc
How about you?
--
Nux!
www.nux.ro
2007 Apr 18
3
[PATCH 12/21] i386 Deprecate descriptor asm
Ancient inline assembler that manipulates descriptor tables is unreadable
and has no type checking. Doing this in C actually generates better code,
saves code space, and improves readability.
The fact that you must cast descriptors to (char *) for the inline assembler
to work properly caused me no end of grief working on these patches.
Note that GCC does not generate rotations to utilize
2007 Apr 18
3
[PATCH 12/21] i386 Deprecate descriptor asm
Ancient inline assembler that manipulates descriptor tables is unreadable
and has no type checking. Doing this in C actually generates better code,
saves code space, and improves readability.
The fact that you must cast descriptors to (char *) for the inline assembler
to work properly caused me no end of grief working on these patches.
Note that GCC does not generate rotations to utilize
2007 Dec 13
2
[PATCH] avoid ifdefs in desc.h, getting rid of pack_ldt and pack_tss
By Andi Kleen's suggestion, this patch removes pack_ldt() and pack_tss()
wrappers in favour of a general wrapper. It saves us an ifdef and some lines
of code, but more importantly, it's more elegant.
No functional change is made.
Signed-off-by: Glauber de Oliveira Costa <gcosta@redhat.com>
---
include/asm-x86/desc.h | 55 ++++++++++++++---------------------------------
1 files
2007 Dec 13
2
[PATCH] avoid ifdefs in desc.h, getting rid of pack_ldt and pack_tss
By Andi Kleen's suggestion, this patch removes pack_ldt() and pack_tss()
wrappers in favour of a general wrapper. It saves us an ifdef and some lines
of code, but more importantly, it's more elegant.
No functional change is made.
Signed-off-by: Glauber de Oliveira Costa <gcosta@redhat.com>
---
include/asm-x86/desc.h | 55 ++++++++++++++---------------------------------
1 files
2005 Jul 27
1
Samba ACL and '+' on a 'ls - l'
Dear Guys,
I have noticed that one of our domain users folder in
/var/lib/samba/profiles has a '+' on the end of their username folder
and all the files in their profile too.
I know this is to do with ACL's and I know Samba can translate Windows
ACL's to filesystem acls, but where can I find out where/how they are
getting created and remove them.
They should be know different
2012 Oct 04
4
Creating vegetation distance groups from one column
Hi R listers,
I am trying to group distances of nests to the vegetation into classes that
are define by (0-5m, 6-10m, 11-15m, 16-20m, 21-25m, 26-30m, 31-35m, 36-40m,
41-45m, 46-50m, 51-55m, 56-60m). Each row is a nest and all the distances to
the vegetation is in a column.
In plyr, I have tried - below script but I think I am going about this the
wrong way and am not successful.
#Veg index
2003 Jul 09
2
Packages, generics, S3 and S4
My question has two parts.
The first is with regard to the frame or environment in which generic
functions are defined in packages. It seems as though they are defined
(i.e. exist as objects) in frame 1, even when defined in a package.
The following is a short example:
setClass("track",representation(x="numeric",y="numeric"))
plotTrack <- function(x,y,...)
2011 Apr 09
1
How do I make this faster?
I was on vacation the last week and wrote some code to run a 500-day
correlation between the Nasdaq tracking stock (QQQ) and 191 currency pairs
for 500 days. The initial run took 9 hours(!) and I'd like to make it
faster. So, I'm including my code below, in hopes that somebody will be able
to figure out how to make it faster, either through parallelisation, or by
making changes. I've
2007 Dec 06
51
[PATCH 0/19] desc_struct integration
Hi,
this is a series of patches that unify the struct desc_struct and friends
across x86_64 and i386. As usual, it provides paravirt capabilities as a
side-effect for x86_64.
I consider the main goal, namely, of unifying the desc_struct, an ongoing
effort, being this the beginning. A lot of old code has to be touched to
accomplish that.
I don't consider this patch ready for inclusion.
2007 Dec 06
51
[PATCH 0/19] desc_struct integration
Hi,
this is a series of patches that unify the struct desc_struct and friends
across x86_64 and i386. As usual, it provides paravirt capabilities as a
side-effect for x86_64.
I consider the main goal, namely, of unifying the desc_struct, an ongoing
effort, being this the beginning. A lot of old code has to be touched to
accomplish that.
I don't consider this patch ready for inclusion.
2007 Apr 18
1
[RFC/PATCH LGUEST X86_64 03/13] lguest64 core
plain text document attachment (lguest64.patch)
This is the main core code for the lguest64.
Have fun, and don't hurt the puppies!
Signed-off-by: Steven Rostedt <srostedt@redhat.com>
Signed-off-by: Glauber de Oliveira Costa <glommer@gmail.com>
Cc: Chris Wright <chrisw@sous-sol.org>
Index: work-pv/arch/x86_64/lguest/Makefile
2007 Apr 18
1
[RFC/PATCH LGUEST X86_64 03/13] lguest64 core
plain text document attachment (lguest64.patch)
This is the main core code for the lguest64.
Have fun, and don't hurt the puppies!
Signed-off-by: Steven Rostedt <srostedt@redhat.com>
Signed-off-by: Glauber de Oliveira Costa <glommer@gmail.com>
Cc: Chris Wright <chrisw@sous-sol.org>
Index: work-pv/arch/x86_64/lguest/Makefile