similar to: par(ask=TRUE) in R CMD check?

Is there a good strategy for testing examples which should not be run by default? For instance, I have examples which get data from the Internet. If I wrap them in try() then they can be skipped if the Internet is not available, but may not be tested in cases when I would like to know about the failure. (Not to mention that the example syntax is ugly.) If I mark them \dontrun or \donttest

Hi, All: What might cause "R CMD check" to report, "could not find function" for a function that has long been in the 'fda' package? Both Jim Ramsay in Ottawa, Canada, and I in San Jose, CA, get this same error. I replicated it with a fresh, anonymous checkout from R-Forge (svn checkout svn://svn.r-forge.r-project.org/svnroot/fda). With this, I did

Hi, First, I do some calculation, then a plot. Add some lines and texts to the plot. Second, do some further calculation, then a plot. Add again some lines and texts to the plot. Third, do some further calculation, then.... Fourth, ..... After a plot is complete (means the plot itself, lines and texts) I would like to click 'enter' to see the next complete plot (again the plot itself,

Hello, All: The CRAN checks for the "fda" package includes one error: The error most likely occurred in ... file.copy2 ... Error: unprotect_ptr: pointer not found Execution halted (http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian/fda-00check.html) The help page for "file.copy2" includes "\examples" with everything wrapped in

I have a query after finding an error running Rtools on a Windows machine. I am trying to build an update to the R fda library using Rtools27 under Windows XP Pro. This is the current fda library on RForge: http://r-forge.r-project.org/projects/fda Following R CMD build, R CMD check produces the following error in 00Install.out: installing R.css in F:/work/RForge/fda.Rcheck make: ***

Dear list, When I run an R CMD check --as-cran on my package (pROC) I get the following note: > Uses the superseded package: ?doSNOW? The fact that it uses the doSNOW package is correct as I have the following example in an .Rd file: > #ifdef windows > if (require(doSNOW)) { > registerDoSNOW(cl <- makeCluster(2, type = "SOCK")) > ci(roc2,

Oh, I completely missed that one. It's very neat as it seems to work both on Windows and Unix. Thanks! Xavier On 10/02/15 10:52, Martyn Plummer wrote: > The CRAN package snow is superseded by the parallel package which is > distributed with R since version 2.14.0. Here are the release notes > > \item There is a new package \pkg{parallel}. > > It incorporates (slightly

Hello: I'm having problems creating a real NAMESPACE to replace the pro forma one in the fda package on R-Forge. "R CMD check" complains, "Error: package 'zoo' could not be loaded ... there is no package called 'zoo'"; see below. I get this both with and without "import(zoo)" in NAMESPACE. Suggestions? Thanks,

Hi, Paul: "if(!fda::CRAN())" runs code except with "R CMD check ?as-cran". I use it so CRAN checks skip examples that (a) need the Internet or (b) take too long for CRAN. Hope this helps. Spencer On 11/26/2014 10:45 AM, Paul Gilbert wrote: > Is there a good strategy for testing examples which should not be run > by default? For instance,

Hello, All: I have for years copied an address like "C:\Program Files\R\R-2.15.0\library\MASS\scripts" from Windows Explorer into R, then manually replaced "\" with "/". I have a function to automate this added to the development version of "sos". However, it generates a warning in "R CMD check" ("parse error: unexpected

Hi, source(file,echo=T) will not echo the last comment in "file" if it is the last line in the file. For instance, when sourcing a file containing the following lines #comment 1 a<-1 #comment 2 R will echo > #comment 1 > a<-1 What is the solution to have R echo all of the comment lines? Specific context: This problem arises e.g. in the context of help files (.Rd) whose

Hello: What might be the problem generating messages like "Warning: missing text for item ... in \describe" with "R CMD check" and "R CMD install"? With the current version of "fda" on R-Forge, I get the following: Warning: missing text for item 'fd' in \describe Warning: missing text for item 'fdPar' in \describe

This error can arise when getOption("width") is too small. 80 seems to be the limit for me with R-3.3.2 on Windows. Bill Dunlap TIBCO Software wdunlap tibco.com On Wed, Mar 8, 2017 at 10:28 PM, Spencer Graves <spencer.graves at prodsyse.com> wrote: > Hello: > > > I tried "debug(help)" with the problem mentioned below. It stopped > with a call to

The CRAN package snow is superseded by the parallel package which is distributed with R since version 2.14.0. Here are the release notes \item There is a new package \pkg{parallel}. It incorporates (slightly revised) copies of packages \CRANpkg{multicore} and \CRANpkg{snow} (excluding MPI, PVM and NWS clusters). Code written to use the higher-level API functions in those packages should

How reliable is R-Forge? http://r-forge.r-project.org/ It is down now (for me). Reporting "R-Forge Could Not Connect to Database: " I have just started to use it for a project. It has been down for several hours (at least) on different occasions over the last couple of days. Is that common? Will it be more stable soon? Apologies if this is not an appropriate question for R-help. Dave

How reliable is R-Forge? http://r-forge.r-project.org/ It is down now (for me). Reporting "R-Forge Could Not Connect to Database: " I have just started to use it for a project. It has been down for several hours (at least) on different occasions over the last couple of days. Is that common? Will it be more stable soon? Apologies if this is not an appropriate question for R-help. Dave

Dear all, I (and a colleague) have been working on our first package (for fitting a certain type of cognitive models: http://www.psychologie.uni-freiburg.de/Members/singmann/R/mptinr) for quite a while now and have the feeling, that it is "good to go". That is, we want to submit it to CRAN. However, I still have two questions before doing so and would appreciate any comments. 1. How

Hello, All: What changes are being considered / planned in the management and funding of CRAN and R-Forge to handle the near-exponential growth in the number of packages? I ask, because the developers for fda were asked to cut the test time on CRAN to below 5 seconds per *.Rd file. After spending a few days on this, we reluctantly eliminated tests using if(!CRAN()){...} in

Dear friends - I am trying to understand fda and working with the 2009 book from Springer. I run the scripts directly from a new installed fda library and include sessionInfo() below. This is from the script fdarm-ch09.R - I seem to have got not fda_2.2.8 but 2.2.7 - is that the problem? Where do I get .8 as I just reinstalled? Best wishes Troels Ring, Nephrology Aalborg, Denmark >

Hello: ????? How can someone help me find and fix the following, contained in 00check.log on Debian for "https://github.com/JamesRamsay5/fda": NOTE Found the following files/directories: ? ?fdaMatlabPath.m? * checking for detritus in the temp directory ... OK ????? See: https://win-builder.r-project.org/incoming_pretest/fda_5.1.3_20200416_225207/Debian/00check.log ?????