Displaying 20 results from an estimated 500 matches similar to: "Rd, S4 classes and PDFs"
2013 May 02
1
Problems with reading data by readWorksheetFromFile of XLConnect Package
Hi,
Attached are two datasheet to be read.
My raw data "130502temp.xlsx" contains numbers with ' symbols, and they
can't be read as numbers. Even if I copy and paste as numbers to form a new
file "130502temp_number1.xlsx", they could not be read smoothly.
1. How can I read the datasheet as numbers?
2. How can I treat the notation "-" as (1)
2011 May 30
0
Question of the XLConnect package
Hi Everybody
I have started to learn how to use the XLConnect package and I think it is
going to be very helpful to help me to operate between Excel users.
Is there a function that can export a dataframe to a Excel sheet and
automatically create a named region for every column (excluding the column
heading) that correspond to the column name? If this is possible one can
then also create formulae
2012 Dec 22
1
Character Variable in X axis scatter plot
I am very new to R statistics.
Have installed R-2.15.2 ; Rcmdr 1.9-2 ; RStudio 0.97.237 on Debian Squeeze and also windows7
I can Import from Excel File OK
.Workbook <- loadWorkbook("/media/4C90-B739/Oct13-Dec21Bsl.xls")
JJData <- readWorksheet(.Workbook, "Oct13-Dec21Bsl")
remove(.Workbook)
have a data frame with following.
DATEEVENT
2013 Nov 04
3
Reading data from Excel file in r
Hi experts,
I want to read data from an excel data like this:
for the fifth column, from first row until 140 but only 1,3,5,7,.....139
(only 70 values),
How can I do it in R?
thanks
[[alternative HTML version deleted]]
2009 Sep 07
1
some (minor) Rd issue: line breaking in \S4method within \usage{}
Hi,
this is perhaps not so much an issue, but as you are currently
working on the Rd parser anyway...
When you want to document specific S4 methods for an S4 generic
by \S4method{} within a \usage{} environment, and the second
(signature_list) argument is "long", be it because you use multiple
dispatch, be it because you use long class-names, (or both), one
would probably like to be
2010 Aug 30
2
S4 Method Rd Warning
Hello,
I am using R 2.11.0. I have a curious problem where I get a warning in R CMD check which is seemingly not relevant to my Rd file.
The warning says :
* checking Rd \usage sections ... WARNING
Bad \usage lines found in documentation object 'enrichmentCalc':
<unescaped bksl>S4method{enrichmentCalc}{GenomeDataList, BSgenome}(rs, organism, seqLen=NULL, ...)
<unescaped
2010 Aug 30
2
S4 Method Rd Warning
Hello,
I am using R 2.11.0. I have a curious problem where I get a warning in R CMD check which is seemingly not relevant to my Rd file.
The warning says :
* checking Rd \usage sections ... WARNING
Bad \usage lines found in documentation object 'enrichmentCalc':
<unescaped bksl>S4method{enrichmentCalc}{GenomeDataList, BSgenome}(rs, organism, seqLen=NULL, ...)
<unescaped
2008 May 21
2
\S4method in combination with "[" and "[<-"
Dear developers,
We want to use "\S4method" to document new S4-methods for "[" and "[<-".
We use this for other functions/methods and it works without any
problem, but in case of "[" and "[<-" we didn't manage to bring this to
work.
The problem occurs in the development version of our package "distrSim"
which can be found
2009 Mar 13
1
Rd \usage clause for an S4 replace method
Given S4 methods [ and [<-, how do I write the Rd-file usage clause for
the latter one?
What I have now is:
\S4method{[}{TimeSeries,TimeDate,missing}(x, i, j, ..., drop)
\S4method{[<-}{TimeSeries,TimeDate,missing,ANY}(x, i, j, ..., value)
which results in the following output:
## S4 method for signature 'TimeSeries, TimeDate, missing':
x[i, j, ..., drop]
2003 Aug 29
2
authorized_keys options for remote forwarding
Hi,
I've recently run into a situation where it I want clients (or certain
keys) to connect to an OpenSSH server and set up a remote port
forwarding channel (-R) without allowing them to do anything else.
It seems that current OpenSSH doesn't support this. I would like to
suggest the following changes to the options for authorized_keys:
* add a no-local-forwarding option that denies
2020 May 22
0
Compatibility issues caused by new simplify argument in apply function
You didn't explained what the error is. This is what it looks like to
me, but I'm probably wrong in some details:
1. R-devel added an argument to the apply() function, so the header has
changed from
function (X, MARGIN, FUN, ...)
to
function(X, MARGIN, FUN, ..., simplify = TRUE)
2. Your package converted the function apply() to an S4 generic.
3. Now the signatures of your
2011 Feb 21
1
Problem with documentation of user-defined operator (S4 method)
Dear list members,
I have defined a binary operator %append% with methods for some S4
classes. In my documentation file, I want to list the methods explicitly
by using e.g.:
\S4method{\%append\%}{RecLinkData,RecLinkData}(x, y)
In the HTML documentation this comes out right as
## S4 method for signature 'RecLinkResult,RecLinkResult'
x %append% y
, but R CMD check
2017 Aug 30
2
Converting character to numeric using the package "XLConnect"
Hello,
>From an Excel file imported into R where each cell contains characters, I would like to convert some characters to numeric. However, my code doesn?t work. When I write data to worksheets in an Excel file, some numbers in the cells are stored as text (instead of numeric). Here is my code (the Excel file is attached):
rm(list=ls(all=TRUE))
library(XLConnect)
tab <-
2020 May 22
3
Compatibility issues caused by new simplify argument in apply function
Dear R Developers,
the new simplify argument in apply causes that my package (hsdar) does not
pass the
checks in R-devel.
The workaround, Kurt Hornik send me, is working for the R-code:
if("simplify" %in% names(formals(base::apply)))
do something
else
do something else
Unfortunately, I cannot conditionalize the man pages of the functions. I get
the message
that
2017 Aug 30
0
Converting character to numeric using the package "XLConnect"
> On Aug 30, 2017, at 12:24 PM, Nelly Reduan <nell.redu at hotmail.fr> wrote:
>
> Hello,
>
> From an Excel file imported into R where each cell contains characters, I would like to convert some characters to numeric. However, my code doesn?t work. When I write data to worksheets in an Excel file, some numbers in the cells are stored as text (instead of numeric). Here is my
2020 May 22
2
Compatibility issues caused by new simplify argument in apply function
Interesting problem. I'm very rusty on S4 but would one solution be
to, already now, add 'simplify = TRUE' to the S4 method and document
it;
setMethod("apply", signature(X = "Speclib"),
function(X,
FUN,
bySI = NULL,
...,
simplify = TRUE) {
?
Henrik
On Fri, May 22, 2020 at 6:26
2010 Sep 16
0
S4 plot generic documentation
Hi,
Say we want to supply a generic plot() in a package with a simple class,
like this:
---<--------------------cut here---------------start------------------->---
setClass("track",
representation=representation(x="numeric", y="numeric"))
if (!isGeneric("plot")) {
setGeneric("plot",
function(x, y, ...)
2011 Dec 16
0
Rd error message
I get the following error from one of my Rd files in R CMD check (R
2-14.0)
* checking Rd files ... WARNING
Error in switch(attr(block, "Rd_tag"), TEXT = if (!grepl("^[[:space:]]*
$", :
EXPR must be a length 1 vector
problem found in ?backsolve.Rd?
This is likely something that will be glaringly obvious once it's
pointed out, but without a line number I can't
2017 Aug 30
3
Converting character to numeric using the package "XLConnect"
The Excel file can be found from this link: https://1drv.ms/x/s!Apkg2VlgfYyDgQ_mcJ8F4CaXV_Nh
[https://r1.res.office365.com/owa/prem/images/dc-xlsx_40.png]<https://1drv.ms/x/s!Apkg2VlgfYyDgQ_mcJ8F4CaXV_Nh>
File.xlsx<https://1drv.ms/x/s!Apkg2VlgfYyDgQ_mcJ8F4CaXV_Nh>
Partag? via OneDrive
Thanks very much for your help.
Nell
________________________________
De : David Winsemius
2007 May 30
2
S4 assignment \alias and \usage
What is the Rd file alias and usage syntax for an S4 assignment method?
I have been trying variations on
\alias{TSdoc<-,default-method}
\usage{
\S4method{TSdoc}{default}(x) <- value
but so far I have not got it right according to various codoc, etc, checks.
Paul Gilbert
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