similar to: Rcmd SHLIB error

Dear R-devel, I am converting some stand-alone programs (mixed C and F77) to R functions. I've run into two issues that I haven't been able to resolve. I've looked at the R-exts manual and Readme files, but haven't found answers. (1) Can I link to a (Win32) static library? Is there some option to RCMD SHLIB that allows this? I've tried RCMD SHLIB myprog.c -l

Hi, I am trying to compile a simple program with Clang 3.3 on Linux and used -pg and -O2 option. The program would crash with segfault. Interestingly if I compile it with -pg option only it works. Do you have any idea why it crashes? And any workaround? $ cat myprog.c int main() { return 0; } $ clang -v -pg -O2 myprog.c clang version 3.3 (tags/RELEASE_33/final) Target:

Hi Qiao, On 24/07/13 08:23, Qiao Yang wrote: > Hi, > > I am trying to compile a simple program with Clang 3.3 on Linux and used -pg and -O2 option. The program would crash with segfault. Interestingly if I compile it with -pg option only it works. Do you have any idea why it crashes? And any workaround? > > $ cat myprog.c > int main() { > return 0; > } > > $

Hi, I have a couple of quick questions regarding R. 1) I have a ".First" function that automatically loads the quadprog package into the workspace. The .First function resides in R and is only saved if I save the workspace. The exact function is as follows: .First<-function() { library(quadprog) } Is there any way that this function can be saved outside of R? That is, is there

Hi all, Is anyone using oprofile? I'm getting segfaults from opreport at the moment, and I'm not sure if it is opreport, or just me. In case it is something just plain daft I am doing, here is how it goes: opcontrol --reset opcontrol --setup --no-vmlinux opcontrol --start ... now I run my program, /tmp/myprog ... opcontrol --dump opcontrol --shutdown then I run, opreport -l

Hi All, FileCheck is a great tool for writing tests. However, it can be also a great tool for hiding the error cause from you, especially if a very common idiom RUN: ./myprog | FileCheck %s is used. If you need to know the output of “myprog” to figure out why your test is failing — then well, good luck, you would need to manually copy’n paste that line, run it, and then note the output.

I am trying to compile an application on a CentOS 5.0 64-bit machine that gives me the error: /usr/local/bin/myprog: /usr/lib64/libstdc++: version `GLIBXX.3.4.9' not found (required by /usr/local/bin/myprog) I have gcc 4.2.3. I've performed a yum install compat-* and glibc* What am I missing? Thanks. Scott

Hi, I am trying the lattice graphics in R. Let's say, such a little experiment in file myprog.r: f <- function(){ x <- 1:10 y <- x^2 xyplot(y ~ x) } f() Then I run the program: > source("myprog.r") but nothing happens. Manully run f() at the command line: > f() then the figure is shown. This seems to be a bug only associated with lattice graphics, the

Hello. I've made out a Debian package out of Maxence Guesdon's OCaml/R bindings: http://yziquel.homelinux.org/topos/debian-ocamlr.html http://yziquel.homelinux.org/debian/pool/main/o/ocaml-r/ The upstream software itself is on the following page: http://home.gna.org/ocaml-r/ This binding is dynamically linked to the /usr/lib/R/lib/libR.so and to the /usr/lib/libRmath.so libraries.

I need to schedule a process/program every hour on the hour between 9am and 4pm on the 2nd through the 9th of each month except on Saturday and Sunday.? So, I tried this entry: 0 9-16 2-9 * 1-5 ./myprog.sh Unfortunately it runs outside of the 2nd through the 9th and still runs on Sat. through Sun. Is there a way to do this (outside the program itself)? -Frank

I understand that it is applied automatically when needed, but there are times when one would want to run it manually. An example is when I want to literally create a new wine prefix such as env WINEPREFIX="/home/bamm/apps/myprog" wineprefixcreate to prepare a clean profile for future installation of myprog. I know that running setup with a WINEPREFIX would create the clean profile,

Hello I have recently installed R 2.14.2 on a brand new pc running Windows 64. One of things I would like to do is to recompile my R package (with C and fortran source codes) for this new environment (it works on a mac and on a linux box). To this end, I had rtools 2.14 downloaded and installed (I have also added 2.14.2/bin/x64 to PATH so that Rcmd works on a terminal). On a cmd terminal I

Hello all, I was trying to compile a simple C program hello.c using R CMD SHLIB hello.c. MY R software residing in C:\Program Files\R\R-2.15.0, and also I have downloaded the Rtools 2.15.0 and it is in C:\Rtools, MY file(hello.c) is in E:\R_dir. I have followed the procedures given below 1. In a new CMD.exe window I have set the path as c:\ Rtools\bin; C:\Rtools\MinGW\bin;C:\Program

Is this on both EL6 and EL7? If only EL7, it could be control groups causing the issue. The idea of cgroups is to prevent zombie processes, but if you need your program to spawn another process then restart itself while the other process continues to run, you need to launch it in a different control group, or the shutdown of the parent process will also kill the child. In my case, we have an

Hello all and happy new year !!! I had a package that worked fine but since I switched to R 2.15.2, It is not compatible anymore (I have the error message: not installed for 'arch=i386'). I have therefore updated Rtools 2.16 and Path variables as follow: PATH=C:\Rtools\bin;C:\Perl\bin;C\Rtools\MinGW\bin;C:\PROGRA~1\R\R-2.15.2\bin\i38

I follow Alan Lenarcic's very helpful tutorial on building R package for Windows (XP), which could be found in www.stat.columbia.edu/~gelman/stuff_for_blog/AlanRPackageTutorial.pdf<http://www.stat.columbia.edu/~gelman/stuff_for_blog/AlanRPackageTutorial.pdf>. The package involves a small dll compiled from some very simple C++ codes. The build process seemed to work smoothly, until i

Hi, With older wine , to have a desktop icon of my program, I was doing, for example : wineshelllink --desktop --path /home/viny/.wine/dosdevices/c:/path/myprog.exe --link MyProg --icon myprog.xpm --workdir /home/viny/.wine/dosdevices/c:/MyProg But how to do with current wine version : wineshelllink doesn't exist anymore ? Thanks

Hi all, I am trying to compile Rgraphiz on Windows 7 64bit with R-2.13.0. I have installed Rtools213.exe from [1]. The 64bit packages in [2] provided me with the 64 bit version of graphviz. After intalling the binary version Rgraphviz 1.30 (in 32bit) it complains (as expected) that: > library(Rgraphviz) Error: package 'Rgraphviz' is not installed for 'arch=x64' I

Dear R development: I'm not sure if this is the appropriate list, but it's a start. I would like to put together a package which contains a CUDA program on Windows 7. I believe that it has to do with the Makeconf file in the etc directory. But when I just use the nvcc with the shared option, I can use the dyn.load command, but when I use the is.loaded function, it shows FALSE.

I'm fairly astute at C and R but new to parallelization. Would someone be willing to provide help in the form of a simple example that parallelizes an R function from the inside of a C routine? If so, write me back at izmirlig at mail.nih.gov Thanks!