similar to: 'libRblas.so' missing in R 2.12.1

Dear R-developers, I am having trouble installing rJava on R 2.8.0 / debian etch. What goes wrong? I am happy for every advice. Best, Christian > install.packages("rJava") Warning in install.packages("rJava") : argument 'lib' is missing: using '/nfs/compdiag/package/R/lib/bioconductor/release_2.3/x86_64' --- Please select a CRAN mirror for use in

Dear R-Users, I am having some trouble getting an installation of RCurl 0.8-1 to work properly on a Debian (Etch) machine. The command 'R CMD INSTALL RCurl_0.8-1.tar.gz' yields the following error: Installing *source* package 'RCurl' ... checking for curl-config... no Cannot find curl-config ERROR: configuration failed for package 'RCurl' I do know that a file is

Dear R users, I would like to show the estimated density of a (0, 1) uniformly distributed random variable. The density curve, however, goes beyond 0 and 1 because of the kernel smoothing. Example: x = runif(10000) plot(density(x)) Is there a way to estimate the density curve strictly within (0, 1) and still use some sort of smoothing? Any help would be greatly appreciated. Best regards,

Dear R users and experts, I am current running a program (a series of commands) in R. such as: A <- as.matrix(read.table("C:/LP.txt")); a=which(memb==q); b=a; B=as.matrix(A[a,b]) LS=sum(B)/2; TL=sum(A)/2 i<-c(1:NN); D=sum(A[a,i]); how can i obtain the CPU time used for these commands ? I have seen the system.time function but i am not sure how to use it. Could anyone help

Dear list members, as I am new to R, I would kindly like to ask for your help. I checked a package with the 'R CMD check' command and all worked out well, (only 'OK' status). Loading its vignette afterwards with 'source("package.Rcheck/inst/doc/vignette.R")' yields a message saying that several (well, in my case more than 50) warnings still exist and can be

Hi How do I specify an S4 class with a slot that is potentially numeric, but NA by default? I want the slot to be NA until I calculate its value (an expensive operation, not needed for all applications). When its value is known, I will create a new object with the correct value inserted in the slot. I want "NA" to signify "not known". My attempt fails because

R 3.5.1 is installed under Linux Mint 19 from binaries r-base and r-base-dev from ubuntu bionic-cran35.? Mysteriously, packages using libRblas cannot be compiled.? I get: libRblas.so: cannot open shared object file: No such file or directory.? And indeed, I find no libRblas.so. Any ideas about how to fix this? Thanks, Steve

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Hi, everybody. I notice debian packages for Ubuntu on CRAN are missing "libRblas.so" and I'm trying to find out why. Why do I care? We are working in an hpc project in a CentOS Linux cluster. That led me to the question of "which BLAS is fastest?" Dirk E referred me this morning to the R admin manual. The standard R compilation creates a shared blas library libRblas.so

Thanks Dirk.? That is what I thought, and sessionInfo() returns: Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/atlas/libblas.so.3.10.3 LAPACK: /usr/lib/x86_64-linux-gnu/atlas/liblapack.so.3.10.3 locale: ?[1] LC_CTYPE=en_US.UTF-8?????? LC_NUMERIC=C ?[3] LC_TIME=en_US.UTF-8??????? LC_COLLATE=en_US.UTF-8 ?[5] LC_MONETARY=en_US.UTF-8??? LC_MESSAGES=en_US.UTF-8 ?[7]

Dear List, I am aware this is slightly off-topic, but I am sure there are people who already had the problem and who perhaps solved it. I am running long-lasting model fits using constrOptim command. At work there is a linux computer (Quad Core, debian) on which I already have compiled R and Atlas, in the hope that things will go faster on that machine. Atlas offers the possibility to be

For example, install.packages("emplik") is failing with: libRblas.so: cannot open shared object file: No such file or directory As Dirk pointed out, this is likely an error in the emplik package, Steve On 09/23/2018 09:57 AM, Ista Zahn wrote: > On Sat, Sep 22, 2018 at 4:08 PM Steve Gutreuter <sgutreuter at gmail.com> wrote: >> R 3.5.1 is installed under Linux Mint

Dear all, I have the following problem: I have written a function genereating to plots, eg myfunction <- (data, some.parameters) { #some calculations etc . par (mfrow=c(1,2)) plot1(......) plot2(.....) } which works fine. But for analysing several variants, I tried a slope, eg: par (mfrow=c(5,5)) for ( i in 1:10) { myfunction(data, i) } Off

Hi,       I am trying to debug R on fedora9.0. When I use gdb to debug R-1.9.2, I am getting the error "R: error while loading shared libraries: libRblas.so: cannot open shared object file: No such file or directory" "Program exited with code 0177. Missing separate debuginfos, use: debuginfo-install glibc.i686" I have libRblas.so shared library in two paths, 1)

Hello, I've been trying to use R-2.11.1 but I get the following error when trying to run R on linux: "error while loading shared libraries: libRblas.so: cannot open shared object file: No such file or directory" How can I solve this problem? Best, Katy

I've attempted to use the optimized GotoBLAS2 library with a freshly compiled R-2.11.1 patched on 64-bit Ubuntu 10.4. (See details below). When I run this version of R, the timings are not different than the original install, and only one core is used in test computations. Can someone point out my error? Thanks. --Dale Details ... I'm running the 64-bit version of Ubuntu 10.04 on my 2

Dear all, I am new to this list and, unfortunately, could not provide help to anyone as yet. I hope I can do so in the future, though! Until then, I am grateful for helpful hints from you more experienced users. For use in an upcoming publication, I generated an eps figure from my x11 window under Debian Linux with dev.copy2eps. It contains 28 line plots with 2 lines each, one solid and one

Hello! For comparing two non-normally distributed samples, Leech (2002) suggested to report nonparametric effect size indices, such as Vargha & Delaney's A or Cliff's d. I tried to search the R-sites, but could not find related procedures or packages that include nonparametric effect sizes. Thank you for your help! Citation: Leech (2002). A call for greater use of nonparametric

Hello, macosx 10.13.6, Rdevel r76458 I'm trying to compile against openblas to reproduce an error on the CRAN check page (my package is clean under winbuilder and all but one of the checks). I've downloaded and installed openblas 0.3.7 but I am not 100% sure that it is being used by R. Using ./configure --with-blas="-lopenblas" Then running R to discover the PID I get:

Johannes, You can minimize an model expression by just putting the ~ on the left and everything else on the righthand side, but I don't think that this is really what you want. In the NLS expression this would ignore the jacobian of the transformation from errors to response, and in nlrq there is the same problem, however you can adjust for the jacobian by rescaling by the geometric mean of