similar to: temp Rscript file collision on Windows

The crashes turned out to have nothing to do with the temp files. They seem to be caused by loading library(gbm). That is when many R sessions nearly simultaneously load the library R crashes with the message "The instruction at '0x63422398' referenced memory at '0x63422398'. The required data was not placed into memory because of an I/O error status of

Hi, It seems that Rscript creates a temporary file to store the commands passed with the -e option, under normal circumstances the temp file gets deleted at some point. Here is an example of a call I use: q:/R/R-2.6.1/bin/Rscript.exe -e ".libPaths(\"q:/R/vogranovich/library\"); params <- list(a=1); source(foo)" The temp files seem to be a problem when multiple jobs are

Dear List, I'm having trouble running a .bat file which calls an R-Script via the command line (using "Rscript"). I put the following line in a file called "test.bat": Rscript --vanilla test.R Then I tried to launch "test.bat" via Windows' CMD (I plan to make this a scheduled Windows task). The actual R-script ("test.R") is executed just fine

Add a simple helper to run a command from a sequence of arguments, without using a shell: this should help reducing the amount of quoting ineeded, since arguments are passed straight as such. Make use of it in the places currently using shell_command, and which don't assume they can run anything (so no shell redirections, `env`, etc). --- builder/builder.ml | 62

We have seen problems with a number of packages which use R/Rscript to run R code in configure or makefiles. (a) You must give a full path: there need be no version of R in the path, and if there is it might not be the version/build of R under which package installation is being done. So the general form is to use ${R_HOME}/bin/R to select the right version. And since ${R_HOME} might

It should be very compatible with the Perl version. --- .gitignore | 3 + Makefile.am | 2 +- configure.ac | 1 + make-fs/Makefile.am | 82 +++++ make-fs/make-fs.c | 736 +++++++++++++++++++++++++++++++++++++++++++ make-fs/test-virt-make-fs.sh | 96 ++++++ make-fs/virt-make-fs.pod | 252 +++++++++++++++ po/POTFILES

Hello R-Help I have a question about the "behind the scenes" behaviour of the Rscript -e command and particularly its interaction with Sweave and tempdir(). We are trying to deploy R as a web service to do water quality analyses and have been writing software to call Sweave via Rscript eg: cmd> Rscript -e Sweave('sweavefile.Rnw') One problem we have been having is that

Dear all, I Located my previous problem: an orphan Rscript was still in /usr/local/bin, and since /usr/local/bin came before /usr/bin/ in the PATH, the "wrong" Rscript was called. Removing /usr/local/bin/Rscript solved the installation issue with Ubuntu 11.04+R 2.13.1 but I'm still unsure on the exact details why/where/when the error "Rscript execution error: No such file or

Hi, This is a follow up to: https://stat.ethz.ch/pipermail/r-devel/2010-July/057921.html The Bioconductor daily builds have been reporting a lot of strange things lately on Windows using R-2.12. This started 2 or 3 months ago and things are not getting better with recent R-2.12. Here is a sample from today's build results. We use Windows Server 2003 R2 for the 32-bit builds, Windows

Thanks for bringing the question over from StackOverflow [1]. I am not very impressed that you STILL hide behind a pseudonym and I am starting to question my sanity as to why I take time out to help someone like that. Anyway, read on ... [1] http://stackoverflow.com/questions/35313704/rscript-launch-custom-r/ On 10 February 2016 at 15:50, Cron Acronis wrote: | Dear all, | | I am trying to use

Hi, A user of my `optparse` package discovered a bug in Rscript's parsing of [args]. (https://github.com/trevorld/optparse/issues/24) I've reproduced the bug on my machine including compiling and checking the development version of R. I couldn't find a mention of it in the Bug Tracker or New Features. Can be minimally reproduced on the UNIX command line with following commands:

On 16/09/2018 4:53 AM, Voeten, C.C. wrote: > Hello, > > I have found what I believe to be a bug in the Linux version of the Rscript binary. > Under Windows (official 64-bit 3.5.1 R distribution running on an up-to-date Win10), I can do the following (e.g. under powershell): > > PS H:\Users\Cesko> Rscript -e 'ls() >>> ls()' > character(0) > character(0)

Greetings, I am creating a standalone executable script using Rscript and have run into problems when I define a new S4 class. Here is a small script that demonstrates my problem: #!/usr/bin/env Rscript # # toy.Rscript -- testing S4 class creation in an Rscript setClass("toy", representation(name = "character", price = "numeric"),

On 04/26/2018 02:23 PM, Kerry Jackson wrote: > Thanks Tomas. > > I confirm the quick workaround works for me in the DOS prompt, and when having a shortcut to RScript in SendTo, and when used in the Task Scheduler. I have not tested the R-devel version, due to my unfamiliarity with installing from source code. Thanks, Kerry. There are binary builds for daily snapshots of R-devel

Thanks, actually this is because the snapshot build is still one version behind (74642, the fix is in 74643). When I build my own installer and install it seems to be working fine. Sorry for the confusion, Tomas On 04/26/2018 02:49 PM, Kerry Jackson wrote: > Hi Tomas, > > Thanks for the info about the binary builds; I did install it, however the bug still seems to be there in the

Good morning R-help, I have an idiot question: I would like to use getSrcDirectory() and friends to allow me to identify where an R file has been called from when invoked using Rscript. If I understand the documentation correctly, the following example should work: In file test.R: options(keep.source=T) fn<-function(x){x<-x+1} srcDir<-getSrcDirectory(fn) print(srcDir) I

Stephen, I hope you don;t mind that I am ccing this to the r-sig-debian list. In the future, please consider asking there, in particular for Ubuntu. On 2 May 2007 at 15:56, Stephen B. Weston wrote: | Dirk, | | I just downloaded and installed the .deb files for R-2.5.0 | for my Ubuntu/Dapper machine from: | | http://lib.stat.cmu.edu/R/CRAN/bin/linux/ubuntu/dapper/ | | I admit that I

Thanks for the report. A quick workaround before this gets fixed is to add an extra first argument that has no space in it, e.g. Rscript --vanilla "foo bar.R" The problem exists on all systems, not just Windows. Best Tomas On 04/25/2018 09:55 PM, Kerry Jackson wrote: > Hi R Developers, > I have found what I think is a bug in the RScript.exe in version 3.5.0 of R for Windows.

Hi, I have some code I run interactively through the R interpreter and it works fine. I then run it as a script with Rscript and I get an error. The error is coming when Rscript builds a model matrix. Here is the Rscript code : #!/usr/lib/R/bin/Rscript --verbose require(MASS) options(contrasts = c("contr.treatment", "contr.poly")) .... form <- as.formula(paste(ef.var,

Hi all, this is probably some tricky configuration file problem, but I figure someone here might have come across this in the past: In short, I've been using Rscript to run my scripts, usually successfully. But recently I've run into a strange problem, and the only function that causes an error is "print". I can create a file that contains only a print command, and it causes