Displaying 20 results from an estimated 7000 matches similar to: "grid.cap() requires more time?"
2010 May 18
1
lattice::panel.levelplot.raster too picky with unequal spacing
Dear all,
I got a couple of warnings using panel.levelplot.raster,
In panel.levelplot.raster(..., interpolate = TRUE) :
'y' values are not equispaced; output will be wrong
although I was quite sure my data were equally spaced (indeed, I
created them with seq()). A closer look at the source code reveals
that the function tests for exact uniformity in grid spacing,
if
2016 Apr 19
3
Problem with X11
Dear All,
I have never had this problem before. I run debian testing on my box
and I have recently update my R environment.
Now, see what happens when I try the most trivial of all plots
> plot(seq(22))
Error in (function (display = "", width, height, pointsize, gamma, bg,
:
X11 module cannot be loaded
In addition: Warning message:
In (function (display = "", width,
2016 Apr 19
0
Problem with X11
I don't have my debian box available so can't confirm. But I would try
$apt-get install libpng
On Tue, Apr 19, 2016 at 11:23 AM, Lorenzo Isella <lorenzo.isella at gmail.com>
wrote:
> Dear All,
> I have never had this problem before. I run debian testing on my box
> and I have recently update my R environment.
> Now, see what happens when I try the most trivial of all
2010 Oct 01
2
strange interaction between rasterImage and Grid graphics
Dear all,
This may be specific to Mac, I haven't had a chance to test another
platform. Consider this,
plot(1,1,t="n")
rasterImage(matrix(1),1,1,1,1)
library(grid)
grid.rect(gp=gpar(fill="grey"))
The grid.rect covers the full device window as expected. However, when
I resize the window ever so slightly (interactive device) the rectGrob
is suddenly clipped to the previous
2006 Oct 19
1
Segmentation fault/buffer overflow with fix() in Fedora Core 5 from Extras repository
The Fedora Extras update of R found its way onto my systems today and
I noted that fix() and edit() no longer work. There is a program crash
that closes up R, but it does not leave a core file. I've tested by
turning off SELinux, it had no effect.
Do you see it too? What do you think? It happens on both systems
I've tested. As far as I know, both of these systems are up-to-date.
I
2011 Feb 15
1
gList and gTree methods of grid::grobX
Dear all,
In an attempt to draw fill patterns in grid graphics, I have
encountered a behavior of grobX that I cannot understand from the
documentation. Consider this,
library(grid)
## gTree
g1 <- gTree(children=gList(
rectGrob(0.5,0.5, width=unit(0.8,"npc"),
height=unit(2,"cm")),
circleGrob(r=0.3)), vp=viewport(0.5,0.5))
##
2008 Jun 27
2
plot(type="l") disjoint between 100 and 101st datapoint
Dear All:
We have been experiencing networking issues so I don't know if this
got through; I can't see it in the archive. My sincere apologies if
this appears twice.
I may have found an unusual bug and am posting here to see if anyone
can reproduce it on their system. First of all, sessionInfo():
> sessionInfo()
R version 2.7.1 (2008-06-23)
i386-apple-darwin8.10.1
locale:
2010 Jan 28
1
quartz() and dpi
Hello all,
I am using quartz (on OS X obviously) to produce PDFs and PNGs from my
plots, for later inclusion in LaTeX.
I am typically using something like:
plot(0)
dev.print(quartz, file="foo.pdf", width=5, height=3)
dev.print(quartz, file="foo.png", width=5, height=3, dpi=72)
I want the sizes of the PDF and PNG to be *equal* in *inches*, which
works with dpi=72. However,
2003 Dec 22
2
R-devel with Darwin: some issues (mostly due to latest R.framework changes)
Some issues with the recent R-devel (rsync today) on Darwin:
1) Recent R-devel is a bit misleading concerning the R-framework
installation:
A new option --enable-R-framework was introduced, but
install-Rframework ignores its absence (or --disable-R-framework for
that matter) and tries to install the framework anyway in / which fails
just after the R itself was copied into /Versions/.... I
2003 May 20
1
R_x11.so
Hi the list,
I just installed the R-1.7.0-1mdk.i516.rpm package on a mdk 9.1. All
looks fine until I try to launch some graphics functions as png() or
even demo( graphics). I receive the following example message:
> png()
Error in png() : R_X11 module cannot be loaded
In addition: Warning message:
unable to load shared library "/usr/lib/R/modules/R_X11.so":
2008 Mar 17
1
unable to load shared library '/usr/local/lib/R/modules//R_X11.so'
Hi,
I downloaded a binary version of R for my Solaris 10 box (from http://www.sunfreeware.com/programlistsparc10.html#R), and everything looked fine during the installation. However, I got a "X11 module cannot be loaded" error when I attempted to save a graph to be a png file. Does it look like a problem of the Solaris box or a problem of the installation (missing library file)?
2009 Dec 11
2
incorrect linetype with pdf device (PR#14128)
Full_Name: baptiste augui?
Version: 2.10.1 RC (2009-12-06 r50690)
OS: Mac OSX 10.5
Submission from: (NULL) (90.25.215.172)
The following code, run with a vanilla R session, produces different visual
output for the two devices,
library(grid)
pdf("test-pdf.pdf")
grid.newpage()
grid.lines(gp=gpar(lty="13", lineend = "butt"))
dev.off()
png("test-png.png")
2006 May 12
1
X11 and vfonts modules on AIX 5.2
I am trying to get R-2.2.1 to pass make check on an AIX 5.2 at work (I know R-2.2.1 is not the latest release, but I encountered make errors in my attempts to install either R-2.3.0 or the R-patched_2006-05-10 on the version of AIX I am on. I will post those errors in a separate posting from this.)
So far, configure and make finish without error for R-2.2.1 using gnu make, gcc-4.1.0, and
2006 Oct 17
1
crush in edit()
Dear all,
I am new to R system. When I tried to edit data read from a csv file, R
system crushed, I got an error message as follows:
> edit(data)
*** buffer overflow detected ***: /usr/lib/R/bin/exec/R terminated
======= Backtrace: =========
/lib/libc.so.6(__chk_fail+0x41)[0x49d020b1]
/lib/libc.so.6[0x49d034a2]
/usr/lib/R/modules//R_X11.so[0x33ed7a]
/usr/lib/R/modules//R_X11.so[0x34050d]
2006 Oct 17
1
crush in edit()
Dear all,
I am new to R system. When I tried to edit data read from a csv file, R
system crushed, I got an error message as follows:
> edit(data)
*** buffer overflow detected ***: /usr/lib/R/bin/exec/R terminated
======= Backtrace: =========
/lib/libc.so.6(__chk_fail+0x41)[0x49d020b1]
/lib/libc.so.6[0x49d034a2]
/usr/lib/R/modules//R_X11.so[0x33ed7a]
/usr/lib/R/modules//R_X11.so[0x34050d]
2007 Oct 29
1
(PR#10379) Re: x11(....) kills R without DISPLAY
Hin-Tak Leung wrote:
> Peter Dalgaard wrote:
> <snipped>
>> You need x11() with a valid display to trigger the bug:
>>
>> [pd at titmouse2 BUILD]$ ssh -Y 192.168.1.10
>> pd at 192.168.1.10's password:
>> Last login: Sat Oct 27 02:40:16 2007 from 192.168.1.11
>> [pd at janus ~]$ echo $DISPLAY
>> localhost:10.0
>> [pd at janus ~]$
2006 Jun 30
3
data extraction
Dear mailing list I have a data that have 20,000 rows and 20 columns. Io
wonted to extract the 10th row only. Example the 10th, 20th, 30th 40th…..20000
th. can you please help me how do I do that.Than kyou.
Example is below.
Inpute:
AG GG GG AG
CC CC CC CC
CT CC CT CT
GG GG GG GG
CC CC CC CC
GG GG GG GG
CC CC CC CC
GG CG CG GG
GG GG GG GG
*CC CC CC CC*
AA AG AG AA
AA AA AA AA
GG AG AG GG
GG AG AG
2013 Jan 09
4
how to count "A","C","T","G" in each row in a big data.frame?
Dear All
I have a data.frame like that:
structure(list(name = c("Gga_rs10722041", "Gga_rs10722249", "Gga_rs10722565",
"Gga_rs10723082", "Gga_rs10723993", "Gga_rs10724555", "Gga_rs10726238",
"Gga_rs10726461", "Gga_rs10726774", "Gga_rs10726967", "Gga_rs10727581",
"Gga_rs10728004",
2005 Nov 25
1
Problems compiling R under AIX 4.3
Hi,
I have problems compiling R 2.2.0 under AIX 4.3 with GCC and xlf95 (FORTRAN)
Compilers.
here the error message I got:
make[1]: Entering directory `/home/mau/sy/R-2.2.0/src/modules/X11'
make[1]: `Makedeps' is up to date.
make[1]: Leaving directory `/home/mau/sy/R-2.2.0/src/modules/X11'
make[1]: Entering directory `/home/mau/sy/R-2.2.0/src/modules/X11'
/usr/local/bin/gcc
2009 Jun 03
1
strsplit for multiple columns
Hi,
I am trying to split multiple columns. One column works just fine, but I
want to do it for multiple columns???
Example
> a
ID V2 V3 V4 V5 V6 V7 V8 V9 V10
1 PBBA0644 -- GG AA -- AA -- AA GG GG
2 PBBA1010 -- GG AA -- AA -- AA GG GG
3 0127ATPR -- GG AA -- AA -- AA GG GG
4 0128EHAB -- GG AA -- AG -- AA AG GG
5 PBBA0829 -- GG AA -- AA -- AA GG AG