similar to: Using SVN + SSH on windows

Here are some notes/observations I've done on my setup that works for me. Hopefully it will be added to some r-forge documentation/wiki. I use: Windows Vista Business SP2 32bit TortoiseSVN 1.6.7 (Build 18415 - 32 Bit , 2010/01/22 17:55:06) PuTTY v0.60 (with Pageant v0.60) I have a deprecated r-forge project ('r-oo') that I will use through out. My r-forge username is

Is there some way to do this? I've got the current putty (actually, putty-cac), pageant, and plink in my user's Downlods directory - neither he nor I have admin authority on his laptop, and Desktop support's teleworking today - but I can't seem to find a way to configure xming to look there for putty. Or is it start putty, *then* start xming? mark

I am having an issue with Putty v.60 with Pageant v.60 under Wine-1.1.5. The OS is Fedora 10 x86_64, and the Wine it the current RPM version for Fedora. It is not that Pageant or Putty is not working; both do load. Putty does talk SSH2 properly. The actual issue is that Keys that are loaded into Pageant v.60 are not available to Putty v.60 for authentication; I suspect that this due to

Hello, I've already tried asking at the cwrRsync forums with no luck yet, so I thought I would try my luck here. According to the rsync man pages, with the -e option you can use other remote shells, and I had thought plink was one of them, but I could be wrong. I can't seem to find any information anywhere about the proper syntax. What I've been trying, are all kinds of combination

Pete Biggs wrote: > On Wed, 2018-02-07 at 14:45 -0500, m.roth at 5-cent.us wrote: >> Is there some way to do this? I've got the current putty (actually, >> putty-cac), pageant, and plink in my user's Downlods directory - neither >> he nor I have admin authority on his laptop, and Desktop support's >> teleworking today - but I can't seem to find a way to

Dear All, I just wanted to announce another free SSH client on Windows capable of working with OpenSSH. The too is called SmarTTY and is available via http://smartty.sysprogs.com/ Could you guys please reference it at the Win32 alternatives page (http://www.openssh.org/windows.html)? Best regards, Ivan Shcherbakov

Hi, We are preparing to make the release of OpenSSH 4.8 soon, so we would greatly appreciate testing of snapshot releases in as many environments and on as many operating systems as possible. The highlights of this release are: * Added chroot(2) support for sshd(8), controlled by a new option "ChrootDirectory". Please refer to sshd_config(5) for details, and please use this

I'm in the process of converting some S3 methods to S4 methods. I have this function : setGeneric("enrichmentCalc", function(rs, organism, seqLen, ...){standardGeneric("enrichmentCalc")}) setMethod("enrichmentCalc", c("GenomeDataList", "BSgenome"), function(rs, organism, seqLen, ...) { ... ... ... })

Hi, I have created an agent node from a master node using below command. puppet node_aws create --image ami-cc5af9a5 --keyname icos-client --type ti.micro Now as i am trying to install puppet on it using below command puppet node install \ --install-script=puppet- enterprise \ --installer-payload=/usr/local/puppet/puppet-2.7.0.tar.gz \ --installer-answers=/usr/local/puppet/agent.txt \

Hey all, I have a problem I can't find a solution for. I am on my third day of testing, researching, planning, and swearing. :) I need to set up a convenient way to synchronize a bunch of data over the network for backups. The server is FreeBSD and the client is Windows. Currently we are using PuTTY, Pageant, and PSCP to SCP the files over SSH. This has various problems which led me to look

I a using plink on a large SNP dataset with a .map and .ped file. I want to get some sort of file say a list of all the SNPs that plink is saying that I have. ANyideas on how to do this? -- Thanks, Jim. [[alternative HTML version deleted]]

On Sun, May 31, 2015 at 7:12 AM, The Doctor <doctor at doctor.nl2k.ab.ca> wrote: > So far BSD/OS and opensh 6.9 pre works with ZOC and Tera Term. > > Putty and WINSCP are broken. > Could you please elaborate on "broken"? Which version of PuTTY? (I'm not familiar with WinSCP versions but I believe the code is based on PuTTY, so I think if we figure out PuTTY then

Im trying to deploy with capistrano from win32 to Linux but no success. I''ve been installed: cwRsync to ssh I ran rake remote:exec ACTION=setup --trace and get: Anyone knows how to get capistrano log ssh comunication? Any idea? Thanks rake aborted! End of file reached c:/ruby/lib/ruby/gems/1.8/gems/net-ssh-1.0.8/lib/net/ssh/transport/version-negot iator.rb:51:in `readline''

Dear Rxperts, q <- data.frame(p=rep(c("A","B"),each=10,len=30), a=rep(c(1,2,3),each=10),id=seq(30), b=round(runif(30,10,20)), c=round(runif(30,40,70))) The operation below... tabular(((p=factor(p))*(a=factor(a))+1) ~ (N = 1) + (b + c)* (mean+sd),data=q) yields some rows of NAs and NaN as shown below b c p a N mean sd mean sd A 1 10

Hello All, This works, results <- read.table("plink.txt",T) while this doesn't. results <- read.table("plink.txt") Make sure your data frame contains columns CHR, BP, and P What does adding the "T" in read.table do? Which argument does this correspond to? I tried searching for it but didn't find the answer in: read.table(file, header = FALSE,

snpMatrix package is quite nice (read.plink())

Hello all, please look at my code below. The problems start where it says # PROBLEMS START HERE. Some sample data is at the very bottom. This is the disgnostic output from the script: > source('load.R') ts.null 1 NA 2 NA 3 NA 4 NA 5 NA 6 NA [1] "Adding data" "VS1A" ts.null VS1A.ts.null VS1A.tts 1 NA NA NA 2

Hi, I am using cwrsync ver 2.1.5 over SSH to connect to myproj@sourceforge.net and facing some problems and not sure how to go about it. Below is the full text of the result when I run the batch file. Was wondering if anyone has seen any similar issue. Any thoughts/help is much appreciated. ------------------------------------------------ Tunnel: ssh Command to run: "C:\Program

Hi, Is the rsync-minimalist still supported for windows? I am using Windows XP Home. I am testing, to get a solution for a client. The minimalist looked very nice--a cygwin.dll and an rsync and an ssh.exe. However, I can connect with ssh, but not with rsync over ssh using these files. I have also tried plink from putty with this rsync. I gather from a lot of the messages that the consenus is

Hi, Following my earlier posts about having problems performing a PCA, I have worked out what the problem is. The problem lies within the PLINK to gds conversion. It seems as though the SNPs are imported as "samples" and in turn, the samples are recognised as SNPs: >snpsgdsSummary("chr2L") Some values of snp.position are invalid (should be > 0)! Some values of