Displaying 20 results from an estimated 5000 matches similar to: "The "lib" argument in install.packages()."
2008 Feb 27
1
Bug in help(). (PR#10859)
There appears to be a bug in help() when there are multiple packages
attached
containing functions with the same name, and offline=TRUE.
Example:
library(mgcv)
library(gam)
If one simply does:
help(gam) # No ``offline=TRUE''
then the following message appears:
Help on topic 'gam' was found in the following packages:
Package Library
mgcv
2008 Sep 10
2
RSiteSearch for words ``as one entity''.
I tried to search for a string of words ``as one entity'' following the
example in the help file:
> RSiteSearch("{logistic regression}")
and got the error message:
2008-09-11 08:55:41.356 open[823] No such file: /Users/rturner/http:/
search.r-project.org/cgi-bin/namazu.cgi?query={logistic+regression}
2010 May 06
2
Problem with install.packages(); getting out-of-date version.
I recently tried to install the latest version of spatstat, from CRAN,
using the install.packages() function. It proceeded to install version
1.17-5 of spatstat, although the current version is 1.18-4.
Checking the CRAN mirror that I used (New Zealand) via Firefox, I found
that version 1.18-4 is indeed present on CRAN. I was able to download
and install version 1.18-4 ``manually''
2009 Dec 06
2
.libPaths(new) stopped working in 2.10
I used to have the following in my .Rprofile:
if (length(.libPaths())==1)
.libPaths(paste(Sys.getenv("HOME"),"/Library/R/",paste(R.version$major,as.integer(R.version$minor),sep='.'),"/library",sep=''))
-- and it added my user-defined library directory. Then I installed
packages there, so during an upgrade, I'd know exactly which packages
I
2007 Oct 17
0
Problem loading spatstat.
I upgraded to R version 2.6.0 yesterday; now I find that I can't load
spatstat.
I re-installed spatstat (that part seemed to work without complaint)
but when
I execute
> library(spatstat)
I get the error message
Error in dyn.load(file, ...) :
unable to load shared library '/Users/rturner/Rlib/spatstat/libs/
i386/spatstat.so':
2010 Mar 23
1
Plot ``freezes''.
In an elderly version of ``plotSymbols'' (now in the cwhmisc package) that
I had lying around, there was the example
plot(1:10,xlab="\374")
which the comments said would give a u-umlaut as the x-axis label.
When I execute this plot
(a) I get no x-axis label at all, and
(b) the plot ``freezes'' in that further plotting commands
(e.g. plot(runif(42))) produce no
2009 Feb 03
1
Package manuals.
When I create a manual for a package that I create and use locally,
e.g. via
R CMD Rd2dvi --pdf foo
where ``foo'' is the name of the directory containing the source for
the package (also named ``foo'') the resulting manual does not appear
to have an index.
The package.pdf files appearing on CRAN all seem to have indices.
What must
I do to get an index appended to the
2016 Oct 04
5
Problem installing rgdal on a laptop running Ubuntu 16.04.1
I previously sent a cri de coeur about this problem to the r-help list
but so far have not managed to extract a solution. So I am trying here.
(Uh, Ubuntu *is* a "special instance" of Debian, isn't it?)
The problem is that I cannot install rgdal, and I need it. Rather
desperately.
I do:
install.packages("rgdal",lib="/home/rolf/Rlib")
and get the error
2008 Nov 10
1
Rd2dvi problem.
If I execute
R CMD Rd2dvi foo.Rd
I get messages of the form:
Converting Rd files to LaTeX ...
foo.Rd
Creating dvi output from LaTeX ...
Saving output to 'foo.dvi' ...
cp: .Rd2dvi4366/Rd2.dvi: No such file or directory
Done
xdvi-xaw: Fatal error: foo.dvi: No such file.
Indeed if I add the --no-clean flag and then cd to the .Rd2dvi<whatever>
directory, I find that there is no
2010 Sep 13
1
Problem with all.equal and POSIXt.
I'm getting an error when applying all.equal() to objects of
class POSIXt.
E.g.
x <- strptime(rep("2007-02-12",10),format="%Y-%m-%d")
all.equal(x,x)
Error in target[[i]] : subscript out of bounds
The object seems to have to be of double-digit length to trigger the
error. E.g.
all.equal(x[1:9],x[1:9])
returns TRUE.
I did a cursory search of the r-help pages and
2010 May 28
2
Asterisk 1.6.2.7 + app_fax + OpenBSD 4.7 minor issue
Hi folks,
I am having a small problem with asterisk-1.6.2.7 + app_fax on OpenBSD
4.7 -release. Everything seems to work fine. I have a macro which
answers, receives the fax to a tiff, and then runs a script (mailfax) to
convert that to pdf and email it. It all works perfectly except for some
errors I am seeing in the console. After it hangs up I get a dozen or so
messages in the cli
2002 Jan 02
3
Homemade packages.
I've recently installed R-1.4.0 and I'm having the devil's own
time trying to install a home-made package. As far as I can tell,
I'm doing the same things that I did previously, under 1.3.1, but
somehow everything goes haywire. (Quite possibly I'm simply
mis-remembering what I did before, but I can't for the life of me
figure out what to change).
A toy example of what I
2007 May 01
1
R CMD Rdconv drops sections: arguments, seealso, examples (PR#9649)
On Mon, 30 Apr 2007 bill at insightful.com wrote:
> On Tue, 10 Apr 2007 timh at insightful.com wrote:
>
> > I've created a .Rd file (below), then converted that to .sgml using
> > R CMD Rdconv --type=Ssgm combn.Rd > combn.sgml
> > The output (shown below) is missing some of the sections:
> > arguments
> > seealso
> > examples
> > If
2008 Nov 03
1
array in version 2.8.0
What happened? TIA.
In version 2.7.x:
> (x <- array(1:4, c(2,2)))
[,1] [,2]
[1,] 1 3
[2,] 2 4
> as.array(x)
[,1] [,2]
[1,] 1 3
[2,] 2 4
In version 2.8.0:
> (x <- array(1:4, c(2,2)))
[,1] [,2]
[1,] 1 3
[2,] 2 4
> as.array(x)
Error: evaluation nested too deeply: infinite recursion /
options(expressions=)?
-----
The power
2009 Feb 02
1
Getting 'LinkingTo' to find the right library
I am experimenting with exporting pointers to some of the functions in
deSolve so that other packages may import them, using the
'R_RegisterCCallable' mechanism. I have added a header file and some
other C code in inst/include of the deSolve source package that need to
be accessible to other packages. I have a site-library set up in
Rprofile.site where all installed packages go, and as
2017 Jul 14
2
[regression drm/noveau] suspend to ram -> BOOM: exception RIP: drm_calc_vbltimestamp_from_scanoutpos+335
On Fri, 2017-07-14 at 15:36 +0200, Mike Galbraith wrote:
> All DRM did was to slip a
> WARN_ON_ONCE() that nouveau triggers into a kernel module where such
> things no longer warn, they blow the box out of the water.
BTW, turn that irksome WARN_ON_ONCE() in drivers/gpu/drm/drm_vblank.c
into a WARN_ONCE(), and all is peachy, you get the warning, box lives.
---
2008 Oct 30
1
Compiling R Packages
I am working on a SLES 10 cluster with R available on it. To better use my resources, I want to use Rmpi, but I am having a difficult time installing it. I have set the $R_LIBS variable correctly.
The MPI libraries are available through the PGI compiler, but this R instance was compiled with GCC.
The Rmpi package can be compiled and installed with
%R CMD INSTALL Rmpi_0.5-5.tar.gz
2001 Dec 20
2
library()
I've just installed version 1.4.0 of R, and am experiencing
a puzzling phenomenon with the library() function.
I have .lib.loc set as follows:
> .lib.loc
[1] "/usr/local/lib/R/library" "/home/faculty/rolf/Rlib"
If I invoke
> library(melvin)
I get the error message
Error in library(melvin) : There is no package called `melvin'
but if I invoke
>
2012 Sep 19
1
Setting library path (again)
Hi,
Sorry for posting a question that has been asked before but I couldn't
quite find the right answer in previous help topics.
I am trying to set my library path to a user-specified library
("C:/Users/K/Documents/Work/RLib"). I have used
.libPaths("C:/Users/K/Documents/Work/RLib") but when I check the
.libPaths(), both the user-specified and default libraries appear. It
2015 May 15
2
Installation error with R-devel
I have a local library with functions that interrogates an institution-specific web API,
so is not of interest to anyone outside of Mayo. For some reason the R CMD INSTALL
command fails. See below:
Build the library, then install it.
tmt-local2127% R CMD build dart
* checking for file ?dart/DESCRIPTION? ... OK
* preparing ?dart?:
* checking DESCRIPTION meta-information ... OK
* installing