similar to: S4 objects in the data directory

Displaying 20 results from an estimated 1800 matches similar to: "S4 objects in the data directory"

2009 Jan 22
1
pdf() and pch problems
Hi R-2.8.1, Suse 11.1 I'm having problems with pdf(). In the following transcript, file 'f.pdf' does not use the expected symbols for the plot. It uses a 'q' letter instead of the open circle I get when viewing the graphics window. I also get the same under r47678. Does anyone else get this? le112:~/scratch/R-2.8.1% R --vanilla --quiet >
2009 Jan 22
1
pdf() and pch problems
Hi R-2.8.1, Suse 11.1 I'm having problems with pdf(). In the following transcript, file 'f.pdf' does not use the expected symbols for the plot. It uses a 'q' letter instead of the open circle I get when viewing the graphics window. I also get the same under r47678. Does anyone else get this? le112:~/scratch/R-2.8.1% R --vanilla --quiet >
2013 Sep 23
1
tar warnings in R-3.0.2 RC when R is installed by a different (non-root) user
Hi, I created a package as follows: > a = 1 > package.skeleton() Then I got the following output when building the package: * checking for file ?anRpackage/DESCRIPTION? ... OK * preparing ?anRpackage?: * checking DESCRIPTION meta-information ... OK * checking for LF line-endings in source and make files * checking for empty or unneeded directories * looking to see if a ?data/datalist?
2008 Oct 06
2
why is \alias{anRpackage} not mandatory?
Dear R developers, if one uses package.skeleton() to create a new package, then a file anRpackage.Rd with the following entries is prepared: \name{anRpackage-package} \alias{anRpackage-package} \alias{anRpackage} \docType{package} Packages created this way have a definite entry or overview page, so: ?anRpackage gives new users of a certain package a pointer where to start reading. This is
2011 Aug 19
3
installing packages systemwide
I installed some downloaded packages in R. I always do $sudo R CMD INSTALL <anRpackage.tar.gz> By default it is storing these packages into my directory /home/mary/R/x86_64-pc-linux-gnu-library/2.13/. However I want them to be systemwide into /usr/local/lib/R/site-library/ folder. I tried $sudo R R> install.packages("anRpackage", dep=TRUE) I did not succeed into getting
2011 Aug 19
3
installing packages systemwide
I installed some downloaded packages in R. I always do $sudo R CMD INSTALL <anRpackage.tar.gz> By default it is storing these packages into my directory /home/mary/R/x86_64-pc-linux-gnu-library/2.13/. However I want them to be systemwide into /usr/local/lib/R/site-library/ folder. I tried $sudo R R> install.packages("anRpackage", dep=TRUE) I did not succeed into getting
2011 Jun 23
1
Class not found when search in .onLoad
Hi, I am facing with a strange behaviour of isClass and extends when these are called in .onLoad in both R 2.12.1 and R 2.13.0. This is preventing my package from doing some object initializations at a proper place (i.e. in .onLoad). Suppose one defines two S4 classes in a package, and that one needs to check the inheritance between these two when loading the package (e.g. to validate slots
2020 Feb 18
2
Possible Regression in setClassUnion between 3.5.0 and 3.6.0
I am trying to create a class union of class unions to facilitate method dispatch. When I execute code in the global environment, everything acts as expected, however when I put the same code in the context of a package, selectMethod can no longer find the correct method. This first block below puts the code in the context of a package: fn <- "codefile.R" writeLines( c(
2012 Nov 02
1
Can't install.packages() from local repo in 2.15.2
Hi guys I think there's a high chance this is a bug. But I can't rule out that I can be blamed for this. I've posted this to bugzilla (#15092). Then I read that I probably should have posted it to R-develop first. Sorry for doing this in the wrong order. I've set up a local repo on my local drive (happens to be mapped to L:/). It has the following structure (as per
2020 Feb 19
2
Possible Regression in setClassUnion between 3.5.0 and 3.6.0
Thanks, I'll look into it. On Tue, Feb 18, 2020 at 8:32 AM Ezra Tucker <ezztucker at gmail.com> wrote: > > Hi Robert, > > This looks like a bug to me (tested in R 3.6.2 on Windows), f(new("a")) > should return "hi!". I'll add that this DOES work properly in 3.6.1 > which leads me to suspect this could be due to the subtle change in the > way
2006 Sep 12
1
package.skeleton() in R-2.4.1
Hi R version 2.4.0 alpha (2006-09-06 r39158) MacOSX 10.4.7 There was a thread some time ago as to whether the structure created by package.skeleton() would pass R CMD check. I have an example where package.skeleton() gives an R file that gives an error when sourced. If I type setClass("brob", representation = representation
2007 Dec 12
2
R CMD check error, Readitem unknown type 203
Hi, Apologies if it has already been posted. I searched the archives and couldn't find the answer to my problem. I am building a R package and while checking it with R CMD check, I get the following error, * checking whether package 'drCCA' can be installed ... ERROR Installation failed. 00install.out shows following message, ** building package indices ... Error in
2020 Feb 26
1
Possible Regression in setClassUnion between 3.5.0 and 3.6.0
Okay - that makes sense and thanks for looking into this! As an aside, from R-devel's perspective would you say methods are stabilizing again or do you foresee a lot of changes coming in the 4.* series? On Tue, Feb 25, 2020 at 3:39 PM Michael Lawrence via R-devel < r-devel at r-project.org> wrote: > This seems to work as expected (returning "hi!") in R-devel, but there
2005 Jun 13
1
Error in load(zfile, envir = envir) : input has been corrupted, with LF replaced by CR
I am trying to build a package binary, and get the message below. Can anyone point me to a solution to that problem. Thanks in advance S?ren .... installing data files installing man source files installing indices Error in load(zfile, envir = envir) : input has been corrupted, with LF replaced by CR Execution halted make[2]: *** [indices] Error 1 make[1]: *** [all] Error 2
2007 Dec 27
2
Problem of lmer under FreeBSD
I encounter such problem with lmer under FreeBSD, but not under Windows. Anyone knows why? Thanks. > example(lmer) lmer> (fm1 <- lmer(Reaction ~ Days + (Days|Subject), sleepstudy)) Error in UseMethod("as.logical") : no applicable method for "as.logical" > traceback() 9: as.logical(EMverbose) 8: as.logical(EMverbose) 7: lmerControl() 6:
2009 Jul 28
3
[PATCH 0/2] Deprecate zfile
OK let's restart this whole architecture thing. Firstly two patches which pass the '-z' parameter to 'file' so it looks inside compressed files. (Thanks to Matt for finding this not-so-obscure option). This means the 'zfile' command is now obsolete. Rich. -- Richard Jones, Emerging Technologies, Red Hat http://et.redhat.com/~rjones virt-p2v converts physical
2012 Apr 05
2
"NA" vs. NA
Dear All, I assume this is an R-devel issue, apologies if I missed something obvious. I have a dataframe where the row names are country codes, based on ISO 3166, something like this: ------------ "v1" "v2" "UK" 1 2 "NA" 2 3 ------------ It happens that "NA" is the country code for "Namibia", and that creates problems on
2005 Jun 28
2
Error in compiling R
When compiling R on Windows, I am getting the following error. Does anyone have any suggestions? ---------- Making package datasets ------------ adding build stamp to DESCRIPTION installing R files installing data files preparing package datasets for lazy data loading Error in load(zfile, envir = envir) : input has been corrupted, with LF replaced by CR Execution halted make[4]: ***
2019 May 14
2
[R-pkg-devel] Three-argument S3method declaration does not seem to affect dispatching from inside the package.
CCing r-devel. On Tue, 14 May 2019 at 02:11, Pavel Krivitsky <pavel at uow.edu.au> wrote: > > Dear All, > > I've run into this while updating a package with unfortunately named > legacy functions. It seems like something that might be worth changing > in R, and I want to get a sense of whether this is a problem before > submitting a report to the Bugzilla. > >
2005 Jan 26
1
error in building help files
Hi All, I was updating my help pages for a package when all of a sudden I got the following error when using R CMD INSTALL: >>> Building/Updating help pages for package 'depmix' Formats: text html latex example Error in load(zfile, envir = envir) : error reading from connection Removing all the help files makes the error disappear, but only removing the help file that I