Displaying 20 results from an estimated 5000 matches similar to: "Why license filtering is important (was non-GPL ...)"
2004 May 12
1
Problem installing SparseM on Debian stable
I have troubles installing the "SparseM" package on my Debian stable
Linux system.
Debian's version of R is:
platform i386-pc-linux-gnu
arch i386
os linux-gnu
system i386, linux-gnu
status
major 1
minor 5.1
year 2002
month 06
day 17
language R
This is the installation output:
> R CMD INSTALL -l /usr/lib/R/ SparseM_0.36.tar.gz
* Installing
2009 Sep 10
1
Non-GPL packages for R
Subject: Non-GPL packages for R
Packages that are not licensed in a way that permits re-distribution on
CRAN are frequently a source of comment and concern on R-help and other
lists. A good example of this problem is the Rdonlp2 package that has
caused a lot of annoyance for a number of optimization users in R. They
are also an issue for efforts like Dirk Eddelbuettel's cran2deb.
There
2012 Apr 25
1
trouble installing SparseM
Dear R People:
I am attempting to install SparseM on R 2.15.0 on a Linux 11.10 system.
Here is the output
> install.packages("SparseM",depen=TRUE)
Installing package(s) into ?/home/erin/R/x86_64-pc-linux-gnu-library/2.15?
(as ?lib? is unspecified)
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... done
trying URL
2009 Sep 10
1
(no subject)
Hi,
I would also be in favor of a stronger stance on licenses. In
industry, where we can really get in big trouble for violating a
license,
we often maintain internal repositories, or need to be careful about
filtering
what is used from CRAN. I think that is should really be a requirement
the package
authors commit to stating what the restrictions are on their packages.
Nicholas
On 10
2004 Nov 18
1
Method dispatch S3/S4 through optimize()
I have been running into difficulties with dispatching on an S4 class
defined in the SparseM package, when the method calls are inside a
function passed as the f= argument to optimize() in functions in the spdep
package. The S4 methods are typically defined as:
setMethod("det","matrix.csr", function(x, ...) det(chol(x))^2)
that is within setMethod() rather than by name before
2004 Jun 25
2
Matrix: Help with syntax and comparison with SparseM
Hi,
I am writing some basic smoothers in R for cleaning some spectral data.
I wanted to see if I could get close to matlab for speed, so I was
trying to compare SparseM
with Matrix to see which could do the choleski decomposition the
fastest.
Here is the function using SparseM
difsm <- function(y, lambda, d){
# Smoothing with a finite difference penalty
# y: signal to be smoothed
#
2007 Jan 30
1
SparseM and Stepwise Problem
I'm trying to use stepAIC on sparse matrices, and I need some help.
The documentation for slm.fit suggests:
slm.fit and slm.wfit call slm.fit.csr to do Cholesky decomposition and then
backsolve to obtain the least squares estimated coefficients. These functions can be
called directly if the user is willing to specify the design matrix in matrix.csr form.
This is often advantageous in large
2006 Oct 03
1
New versions of Matrix and lme4 packages for R-2.4.0
Versions 0.9975-1 of the Matrix and lme4 packages will soon be available on
CRAN for use with R version 2.4.0 or later.
Purpose of the packages:
The Matrix package provides S4 classes and methods for sparse
and dense matrices. The lme4 package provides functions for fitting
and assessing linear or generalized linear mixed effects models (also
called multilevel models). Like the Matrix package,
2006 Oct 03
1
New versions of Matrix and lme4 packages for R-2.4.0
Versions 0.9975-1 of the Matrix and lme4 packages will soon be available on
CRAN for use with R version 2.4.0 or later.
Purpose of the packages:
The Matrix package provides S4 classes and methods for sparse
and dense matrices. The lme4 package provides functions for fitting
and assessing linear or generalized linear mixed effects models (also
called multilevel models). Like the Matrix package,
2010 Jan 30
2
Can I install debs over packages installed via R?
[ Kevin sent this to me but agreed that it's better to have this discussed here. ]
On 30 January 2010 at 12:18, Kevin Donnelly wrote:
| Hi
|
| I'm beginning to learn R,a nd I've just discovered cran2deb - what a terrific
| resource! Thanks for making it.
|
| I was wondering what happens if I want to use cran2deb versions instead of the
| versions installed via R itself. I'm
2010 Feb 14
0
R CMD INSTALL customization; followup on Dirk's question
Last year, Dirk E was asking about customizing options to for packages
when using R CMD INSTALL
http://tolstoy.newcastle.edu.au/R/e4/devel/08/06/1980.html
Has there been more on that question lately?
I also wonder what this means in the "Building Packages" section of
the R-Extensions manual:
"R CMD build can also build pre-compiled version of packages for
binary distributions,
2010 Feb 12
1
packages in cran2deb and Debian
Some packages are available in cran2deb and Debian. After adding
cran2deb to my sources.list it seems the cran2deb ones are favored
because X.Y-ZcranN is "more recent" than X.Y-Z.
In the case of r-cran-rmpi the effect of this was to cause aptitude to
want to uninstall all my mpi stuff. Apparently the automatically
generated package doesn't have mpi as a dependency.
I just put a
2010 Dec 14
1
cran2deb and Debian on cran
What is the relation between the cran2deb repository,
http://debian.cran.r-project.org/, and the debian repositories at CRAN,
http://cran.r-project.org/bin/linux/debian/? I've studied the pages and
this list, but am unsure I've got it right.
My understanding is that cran2deb had almost all packages, targets
testing, and currently is only supported for i386.
It appears the debian repo at
2010 May 26
2
cran2deb Packages.bz2 Hash Sum mismatch
Hi,
I'm using Ubuntu 9.10 amd64 with cran2deb packages (I know it's meant
for Debian, it's worked fine for me for many months).
Recently apt-get update has to started to complain:
...
Hit http://debian.cran.r-project.org testing/ Release
Get:1 http://debian.cran.r-project.org testing/ Packages [515kB]
Fetched 1B in 3s (0B/s)
W: Failed to fetch
2007 May 21
0
quantreg and sparseM will not load
I have recently started using R and want to use the quantreg (and
sparseM) packages.
I downloaded the .tar files for each, and placed the subsequent
folders into the library folder in the frameworks/R.framework/
resources/library folder with all the other packages.
When I try to load either package from the package manager window I get:
Loading required package: SparseM
Error in
2008 Aug 27
1
SparseM
Hello,
I am trying to load the package SparseM. It seems that I have successfully
installed SparseM (version 0.78), but I did not succeed in loading the
SparseM package into R 2.7. Does anybody know a trick for loading
SparseM?
Thanks in advance,
Heike
> library(SparseM,lib.loc=my.lib.loc)
Error in packageDescription(pkg)$Version :
$ operator is invalid for atomic vectors
In addition:
2009 Jul 13
7
[ANNOUNCEMENT] cran2deb: 1700+ new Debian / R packages
Announcing cran2deb: 1700+ Debian packages from almost all of CRAN
------------------------------------------------------------------
Last Friday's presentation at UseR! 2009 was the first really public mention
of 'cran2deb'. It provides Debian packages of all of CRAN. It started as
Charles' project from last year's Google Summer of Code, was further extended
by us over the
2013 Feb 11
3
Ubuntu cran2deb PPA
Dear Michael,
I was looking up the status of the cran2deb effort and notice that you
now have a PPA where new packages are landing and being built for
Ubuntu. It looks like this is still a work in progress, but is already
a fantastic resource for me and I hope it is something that you can
continue to operate.
I'm now installing many of these packages but some things I need are
missing.
2004 Feb 26
1
Loading SparseM on Win2K
I'm having trouble loading the package SparseM in R 1.8.1, OS = Windows
2000.
Installing appeared to go well; I saw no error messages, html documentation
was installed, and "installed.packages()" lists SparseM among the installed
packages.
When I try to load the library, however, I get the following:
> library(SparseM)
Error in slot(mlist, "argument") : Can't get
2010 Jan 11
3
cran2deb repository and Squeeze?
Hi,
I am curious what will happen to cran2deb:
deb http://debian.cran.r-project.org/cran2deb/debian-amd64 testing/
When Squeeze is released? I really hope this service will continue. It
has been great being able to aptitude install R packages.
Additionally are these packages signed and is there a key?
Chris