similar to: R CMD check --use-valgrind doesn't run valgrind on tests

valgrind complains about the save command in R 2.3.1 as shown by the script included below. Of course, I don't know whether this "Conditional jump or move depends on uninitialised value(s)" is really a bug. Experience with similar issues in my own code says it may be, but it is also hard to tell. Having no familiarity with the code cited in deflate.c, I leave the issue to experts.

Sorry if I was supposed to file a bug report, but I don't know whether we're supposed to do that on R devel. I just built R devel from source (2010-06-15 r52280) and tried to check a package with it and Sweave failed on the vignette. It puts the line \usepackage{/HOME/faculty/charlie/local/devel/lib64/R/share/texmf/Sweave} in the *.tex file but, that's not where Sweave.sty is oak$

I think I am using objects according to the man page. This seems to be a valid regular expression. But whether I know what I'm doing or no, it still shouldn't be doing what valgrind seems to be saying it's doing. (IMHO) ---------- start of script ---------- Script started on Mon 01 Aug 2005 02:09:00 PM PDT linux$ printenv VALGRIND_OPTS --tool=3Dmemcheck linux$ cat bar.R foo <- 1

Hi All, I am encountering the following error while performing check on the R package we built: R CMD check packagename_0.99.0.tar.gz During startup - Warning message: Setting LC_CTYPE failed, using "C" * using R Under development (unstable) (2013-05-14 r62742) * using platform: x86_64-unknown-linux-gnu (64-bit) * using session charset: ASCII * checking for file

Background: OS: Linux Mandrake 10.1 release: R 2.1.1 editor: GNU Emacs 21.3.2 front-end: ESS 5.2.3 Colleagues Since I upgraded to R 2.1.1, I am getting a an error message from R CMD INSTALL packagename that says R_HOME ('/usr/local/lib/R') not found. That's not too surprising, since R is now in /usr/lib/R, but what is confusing me is that R CMD INSTALL -l /path/to/library

Hi all, I have a package that contains a function foo that calls a function .fooInternal via match.fun('.fooInternal'). This step is necessary because I want to give the user an option to override .fooInternal with a custom function. The .fooInternal function name is not exported. The function foo runs perfectly well when used in a normal R session. However, the function fails the R CMD

Hi, I've seen that some packages use .packageName internally to infer their own name. Is that officially supported? I could not find it documented anywhere. There's utils::packageName(), which internally looks for .packageName. However, if the latter is not found, it may return NULL whereas an error would be more appropriate if a package name is expected. Using .packageName would give

Hi, i want to use Puppet to install all packages from a webserver (no repository) . Therefore I wrote following Script: class install_package { case "$operatingsystem" { SLES: { notify {"${operatingsystem} ${operatingsystemrelease} detected":} notify {"Installing $packagename now:":}

Hi. I have a factor and I want to extract just those elements that appear exactly once. How to do this? Toy example follows. > a <- as.factor(c(rep("oak",5) ,rep("ash",1),rep("elm",1),rep ("beech",4))) > a [1] oak oak oak oak oak ash elm beech beech beech beech Levels: ash beech elm oak > table(a) a ash beech elm oak

This is a bug/misfeature report for R CMD check. The function tools:::.check_packages_used_in_tests Gives an apparently unintended error when checking the tests in the contributed package rcdd_1.1-3.tar.gz as found on CRAN. See the script below for details. The actual error reported is totally mysterious. * checking for unstated dependencies in tests ... NOTE Error in

I'm trying to remove a DC from a Samba4 based AD network, but run into an error that I can't fathom. Can anyone point me in the right direction? # samba-tool domain demote -Uadministrator GENSEC backend 'gssapi_spnego' registered GENSEC backend 'gssapi_krb5' registered GENSEC backend 'gssapi_krb5_sasl' registered GENSEC backend 'spnego' registered GENSEC

Here it is again, hope this is more clear I am using the following data (only a small subset is given): Habitat Fungus.yield Birch 20.83829053 Birch 22.9718181 Birch 22.28216829 Birch 24.23136797 Birch 22.32147961 Birch 20.30783598 Oak 27.24047258 Oak 29.7730014 Oak 30.12608508 Oak 25.76088669 Oak 30.14750974 Hornbeam 17.05307949 Hornbeam 15.32805111 Hornbeam 18.26920177 Hornbeam 21.30987049

Hi, I test pvgrub on xen-3.3.0. After starting pvgrub with "xm cr xmexample.pv-grub", I can see nothing but qemu window. With "xm li" , I can see this domain is running: Name ID Mem VCPUs State Time(s) Domain-0 0 1024 2 r-----

Hi I'm experiencing some odd behaviour when trying to change passwords. I have Samba 4.1.6-Ubuntu configured as an AD-DC on Ubuntu 14.04LTS. When I change a password (either from a Win10 Pro client, or using smbpasswd on the machine itself) it all reports that things have worked. I can then login to Samba using the new password. However, when I now try to login to Linux using the new

"R Installation and Administration", section 2.5 "Sub-architectures" describes calling specific builds of R using the call "R --arch=name". I am trying to build and install three versions of R-2.9.1, each configured with a different valgrind-instrumentation level ("Writing R Extensions", section 4.3.2 "Using valgrind"). My goal is to be able to

I am trying to do a classic R -d valgrind --vanilla < mypkg-Ex.R as described in http://cs.swan.ac.uk/~csoliver/ok-sat-library/internet_html/doc/doc/R/2.9.1/doc/manual/R-exts.html#Using-valgrind The problem is valgrind crashes imediately. I am using Ubuntu 10.04 LST (actually Biolinux) on a 64bit Dell Precision laptop with 4 core-i5 Intel processors. I have R-2-15-0 installed from source

On 16/02/16 16:01, Rowland penny wrote: > Do you have the ldb-tools package installed on the DC ? if not can you > install it, then run this command: > > ldbsearch -H /var/lib/samba/private/sam.ldb > '(&(objectclass=user)(samaccountname=*))' | grep chris > > Can you post the results. Here you go, without any changes to generic names (ie I've kept my

> Am 16.12.2018 um 00:07 schrieb Gordon Messmer <gordon.messmer at gmail.com>: > > On 12/15/18 1:05 PM, Frank Cox wrote: >> Ultimately it would be very useful to have some kind of a tool that would generate a report from the rpms installed on a system and tell you exactly what depends on what else. Among other things you could use that report to remove stuff that's not

Hi Helpers: I have a factor object that has 314k entries of 39 land cover types. (This object can be coerced to characters neatly should that be easier to work with.) > length(foo) [1] 314482 > foo[1:10] [1] Montane Chaparral Barren Red Fir Red Fir [5] Red Fir Red Fir Red Fir Red Fir [9] Red Fir Red Fir 39 Levels:

Hi All, I have a 8000*8000 matrix and I want to print out a file with the row name, column name and the value for those point with values satisfying a condition. I tried using a for loop, however, it took me forever to get the result. Is there a fast way to do this? Thanks! Bing --------------------------------- 1060 Commerce Park Oak Ridge National Laboratory P.O. Box 2008, MS 6480 Oak