Displaying 20 results from an estimated 1000 matches similar to: "Bug report in foreign library (PR#13425)"
2006 Jul 13
1
writeForeignSAS and potential extensions
Dear R-devel,
I've made some potential extensions to writeForeignSAS
in 'foreign' that I wanted to pass along if anyone is
interested. I've attached the diff -u output against
the version found in foreign_0.8-15 and an .R file
with my changes. (In this .R file, the function is named
writeForeignSAS7 to simplify testing/comparisons.)
I've tried to alter the current
2009 Feb 02
3
Problem with foreign package
I tried to use write.foreign() to export to SAS this morning and got an
error.
When I looked at the code for writeForeignSAS() I saw this line:
dfn < -df
which I think should be
dfn <- df
So, I tried to run update.packages() to see if there was an updated
version and got the following result.
> update.packages(c("foreign"))
Warning message:
In list.files(lib) :
2010 Jan 27
1
Possible bug in fisher.test() (PR#14196)
# is there a bug in the calculation of the odds ratio in fisher.test?
# Nicholas Horton, nhorton at smith.edu Fri Jan 22 08:29:07 EST 2010
x1 = c(rep(0, 244), rep(1, 209))
x2 = c(rep(0, 177), rep(1, 67), rep(0, 169), rep(1, 40))
or1 = sum(x1==1&x2==1)*sum(x1==0&x2==0)/
(sum(x1==1&x2==0)*sum(x1==0&x2==1))
library(epitools)
or2 = oddsratio.wald(x1, x2)$measure[2,1]
or3 =
2019 Jun 04
1
foreign:::writeForeignSAS patch not released?
Hello,
In May 2018 there was some R-devel discussion about a bug in
foreign:::writeForeignSAS. See here:
https://stat.ethz.ch/pipermail/r-devel/2018-May/076220.html
and it resulted in a patch. See:
https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17256
And I see the changes in Subversion here:
https://svn.r-project.org/R-packages/trunk/foreign/R/writeForeignSAS.R
But I don't
2009 Feb 25
2
Fontconfig warning with X11() on MAC OS X 10.4
I posted previously about problems with X11() on my MAC using R 2.8.1 .
After installing the securilty update for Tiger this morning, X11() now
works from an xterm :-)
However, I receive the following warnings with any plotting command using
the default X11 settings.
Fontconfig warning: no <cachedir> elements found. Check configuration.
Fontconfig warning: adding
2009 Mar 26
1
Console colors do not stick (PR#13625)
Full_Name: Sean Laverty
Version: R version 2.8.1 (2008-12-22)
OS: os x 10.5.6
Submission from: (NULL) (155.101.41.13)
In the console colors window, colors do not stick when palettes are closed. All
custom colors are replaced by blue. I've tried all palettes - crayons, sliders,
wheel, spectrum.
"R.bug.report" 30L, 582C[2;1H<<insert bug report here>>[6;1H--please do
2009 Mar 04
4
bug (PR#13570)
<<insert bug report here>>
This is a CRITICAL bug!!! I have verified it in R 2.8.1 for mac and
for windows. The problem is with loess degree=0 smoothing. For
example, try the following:
x <- 1:100
y <- rnorm(100)
plot(x, y)
lines(predict(loess(y ~ x, degree=0, span=0.5)))
This is obviously wrong.
R 2.8
--please do not edit the information below--
Version:
platform
2013 Aug 08
1
HG changes affecting received headers
Let me say this is a rather cosmetic issue, but it appears with the latest commits (around 2.2.5 release) the scheme of 'Received' headers has changed for LMTP:
1) Inet socket:
Return-Path: <dfn-adv-bounces at dfn-cert.de>
Delivered-To: <tlx at leuxner.net>
Received: from spectre.leuxner.net ([188.138.0.199])
by spectre.leuxner.net (Dovecot) with LMTP id
2009 Feb 05
2
Unexpected mfrow, layout behavior (pdf still has multiple pages)
My goal is to create a graph with one column and three rows into a
single graphic. The mfrow, mfcol, and layout functions all have the
same effect: three graphs are produced in a single pdf file, having
one graph per page. This is not what I want (I didn't want multiple
pages). Just before I sent this post, I was able to generate the
desired output with split.screen. Is this the expected
2018 May 17
2
Patch for bug 17256 'possible bug in writeForeignSAS in the foreign library when string is NA'
Attached is a patch to fix https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17256
'possible bug in writeForeignSAS in the foreign library when string is NA'
The patch
1. fixing the case where there were NA within a character column, and the case where all values are strings of length 0
2. general replacement of calls to `sapply` with `vapply` (and replacing any(is.na()) with
2009 Dec 14
1
as.data.frame requires a lot of memory (PR#14140)
Full_Name: Raimar Falke
Version: R version 2.10.0 (2009-10-26)
OS: Linux 2.6.27-16-generic #1 SMP Tue Dec 1 19:26:23 UTC 2009 x86_64 GNU/Linux
Submission from: (NULL) (134.102.222.56)
The construction of a data frame in the way shown below requires
much more memory than expected. If we assume a cell value takes 8 bytes
the total amount of the data is 128mb. However the process takes about
2012 Feb 24
1
syntaxe problem
Hello,
I want to create 10 dataframe using a for loop.
I don t know what to do to create 10 different dataframes whose name is
parametrized with variable i.
This syntaxe fails. It create a unique fataframe called dfn.
Any input will help
Thanks
> for (i in 1:10){
+ filename=paste("avail4",i,sep = "_")
+ dfn=read.table(filename)
+ }
--
PhD candidate in Computer Science
2005 Sep 18
3
as.data.frame segfaults on large lists (PR#8141)
Full_Name: Ulrich Poetter
Version: 2.1.1
OS: i686-pc-linux-gnu FC2
Submission from: (NULL) (134.147.95.187)
as.data.frame() segfaults on lists with very many elements:
> dfn <- rep(list(rep(0,2)),198000)
> test <- as.data.frame.list(dfn)
Process R segmentation fault at Sun Sep 18 17:06:02 2005
2009 May 05
2
Way to handle variable length and numbers of columns using read.table(...)
I've got read.table to successfully read in my table of three columns. Most of the time I will have a set number of rows, but sometime that will be variable and sometimes there will be only be two variables in one row, e.g.
Time Loc1 Loc2
1 22.33 44.55
2 66.77 88.99
3 222.33344.55
4 66.77 88.99
Is there any way to have read.table handle (1) a variable number of rows, and (2) sometime there
2003 Feb 26
5
[Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)
Full_Name: Volker Franz
Version: Version 1.6.2 (2003-01-10)
OS: Debian
Submission from: (NULL) (192.124.28.104)
Hi there,
it seems to me that data.ellipse of package "car" (Version 1.0-1)
produces confidence interval's which are too big. To see this, do:
library(car)
plot(c(-2,2),c(-2,2),pch=0)
data.ellipse(rnorm(10000),rnorm(10000),levels=0.68,plot.points=F)
abline(v=+1)
2009 Apr 22
1
Clarification for options(OutDec)
The documentation for the OutDec option says that it should be a
'one-character string'; yet, if I try a unicode character, it doesn't seem
to work. Are unicode chars not counted as one-character?
This is within the mac GUI, but I also see this on linux boxes.
> x <- '\u00B7'
> nchar(x)
[1] 1
> options(OutDec=x)
Error in options(OutDec = x) : invalid value for
2009 Oct 30
1
bug in `pmatch' (error with too long 'choices')?
I observed the following:
match.arg("white", colors())
yields 'white', but
match.arg("whit", colors())
yields:
`Error in match.arg("whit", colors()) :
'arg' should be one of "white", "aliceblue", '...
this message actually comes from `pmatch'. using a suitable subset of
`colors()' works OK. the precise length
2009 Jun 30
1
possible agrep bug; R 2.9.1, Mac OS X 10.5 (PR#13789)
Same behavior was noted on R 2.9.0 OS X and WIndows.
> t(sapply(seq(0.01, .99, length=20), function(x) c(x, length(agrep("Staatssekretar im Bundeskanzleramt","Bundeskanzler",max.distance=x)))))
[1,] 0.01000000 0
[2,] 0.06157895 0
[3,] 0.11315789 0
[4,] 0.16473684 0
[5,] 0.21631579 0
[6,] 0.26789474 0
[7,] 0.31947368 0
[8,] 0.37105263 0
[9,]
2009 Oct 28
1
'R CMD check' fails with "evaluation nested too deeply: infinite recursion"
I get the error
Error : evaluation nested too deeply: infinite recursion / options(expressions=)?
during a 'R CMD check ...'
on one of my packages. The reason seems to be that this package is
mutually dependent on another one (i.e. the DESCRIPTION files of package
A lists package B under "Depends" and vice versa). this might be bad
design (having bits in both packages needed
2013 Jan 26
2
confidence / prediction ellipse
Hi,
I'm using the R library(car) to draw confidence/prediction ellipses in a
scatterplot.
>From what i understood the ellipse() function return an ellipse based
parameters: shape, center, radius .
If i read dataEllipse() function i can see how these parameters are
calculated for a confidence ellipse.
ibrary(car)
a=c(12,12,4,5,63,63,23)
b=c(13,15,7,10,73,83,43)
v <-