similar to: DNAcopy package output data

Hi All: Has anyone analyzed Illumina 550K data using DNAcopy package? I have around 2300 samples. According to Venkatraman and Olshen 2007 paper, it needs about 25 min to run a single sample for Affymetrix 100K. I am afraid it will take too long to analyzed my data. Anybody has an idea? Thanks! Best, -- View this message in context:

Dear Members, I have developed a program which calls clustering libraries from R. Everything works fine on my laptop. But when I installed the program on another computer, the program gives me the error message: Cannot find JRI native library! Please make sure that the JRI native library is in a directory listed in java.library.path. java.lang.UnsatisfiedLinkError: C:\eclipse\lib\rJava\jri.dll:

On 12/14/2017 10:18 PM, Leslie Zhai wrote: > Hi GCC and LLVM developers, > > I am learning Register Allocation algorithms and I am clear that: > > * Unlimited VirtReg (pseudo) -> limited or fixed or alias[1] PhysReg > (hard) > > * Memory (20 - 100 cycles) is expensive than Register (1 cycle), but > it has to spill code when PhysReg is unavailable > It might be

Hi, I've just done a clean install of centos-5.2 x86-64. When I do a update I get the following errors ============================================================================= Package Arch Version Repository Size ============================================================================= Updating: yum noarch

Hi All, I am using DNAcopy package in R for copy number analysis of 500K chip. The final output which I get from DNA copy is too big to be printed in a file. So I am getting an error as "reached getOption("max.print") -- omitted 475569 rows " Can somebody please provide me the pointers with how to increase the limit for max.print . Thanks, Pooja DISCLAIMER\

I apologize in advance for probably missing something obvious, but if someone could point me in the right direction I'd be grateful. This NOTE is not unique to our package (I list a few others, below). Package bcp has several Suggests (strucchange, for example). Then in an Rd file, we have if (require(strucchange)) { # Doing some examples making use of strucchange } The CRAN check

I am trying to build a package (GWASTools, submitted to Bioconductor) that uses the "sandwich" package. I have references to "sandwich" in DESCRIPTION: Imports: methods, DBI, RSQLite, sandwich, survival, DNAcopy and NAMESPACE: import(sandwich) In the code itself is a call to vcovHC: Vhat <- vcovHC(mod, type="HC0") I have sandwich version 2.2-7 installed.

Check to see if you can get a IOS code leverl that supports SIP on the 6500. then maybe you can use your E1 card directly. you can also get a SIP version of the code for the 7960's etc Dave >>> jwi@weball.csis.dk 6/28/2003 2:56:12 PM >>> Hi Chris I've done a lot of things with Cisco AVVID solutions in the past. > CallManager).....am I right in saying that Cisco

On a fresh installation of XCP 1.6 there is no interface in XCP Network Management. While in comman line ifconfig -a shows me both physical interfaces. I would appreciate for an ideas on what. -- Best regards, Makarov Alexey _______________________________________________ Xen-users mailing list Xen-users@lists.xen.org http://lists.xen.org/xen-users

If you look at an .sln file, there's a long sequence of digits associated with every project, something like this 8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942. For the lack of a better word I called it "encoding". After I changed the dependencies between projects in the solution, msvs replaced those numeric sequences by new ones literally for every project in the solution file. The diff now

Hi GCC and LLVM developers, I am learning Register Allocation algorithms and I am clear that: * Unlimited VirtReg (pseudo) -> limited or fixed or alias[1] PhysReg (hard) * Memory (20 - 100 cycles) is expensive than Register (1 cycle), but it has to spill code when PhysReg is unavailable * Folding spill code into instructions, handling register coallescing, splitting live ranges, doing

https://bugzilla.mindrot.org/show_bug.cgi?id=1998 Bug #: 1998 Summary: Arbitrary command execution using SCP Classification: Unclassified Product: Portable OpenSSH Version: 5.8p1 Platform: All OS/Version: Linux Status: NEW Severity: security Priority: P2 Component: scp AssignedTo:

Dear all, Can anybody tell me how to export a 3d figure made with the plot3d function? I'm careless about whether it's still interactive or not in another format, as long I can get it out of R. Thanks! Alejandro Gonz?lez Departamento de Biodiversidad y Conservaci?n Real Jard?n Bot?nico Consejo Superior de Investigaciones Cient?ficas Claudio Moyano, 1 28014 Madrid, Spain Tel +0034

This information will be mirrored on the Xen 4.4 Roadmap wiki page: http://wiki.xen.org/wiki/Xen_Roadmap/4.4 We''re nearly to the completion of the code freeze, scheduled for tomorrow. After the code freeze, only bug fixes and features marked as "blockers" will be considered. At the moment, the only feature considered a blocker is experimental PVH dom0 support. In early RCs,

attached is the diff of vcprojs that need to be changed to fix the VS build as of revision: 51224. I don't know if this catches all the missing bits, but this does build all the way through. -------------- next part -------------- An embedded and charset-unspecified text was scrubbed... Name: msvs.patch URL:

I too have done some work on an alternative build system for llvm. It is based on boost.build. Of course, it's quite a large project and I'm not ready to contribute the work yet. Ideally I was hoping to replace all of makefile functionality with jamfiles. Boost.build is attractive because support for new compilers/tools comes with new releases of boost.build and need not be added

Hello, Is anyone working on implementing DebugInfo/PDB that doesn't depend on DIA? What would it take to have minimal implementation that would allow to take a PDB file and look up symbols using llvm-symbolizer on a non-Windows (e.g. Linux or MacOS) platform? Regards, Dmitri -------------- next part -------------- An HTML attachment was scrubbed... URL:

Stefanus Du Toit <sdt at rapidmind.com> writes: [snip] > We have considered contributing such a build system, and if we were to > do so would probably base it on SCons (http://www.scons.org/) because > we already use SCons extensively. At first, SCons is what I intended too. But then I read about the KDE experience and took the safe route :-) [snip] > Are you intending

Hi..... I have just successfully setup Asterisk with 2 Cisco 7940 phones (converted for SIP) and a SIP softphone on a W2K box.....and it all seems to work very well.....to those who wrote this software, it is really cool. Anyway, I am new to this software, and I have a lot of questions which I am hoping someone on the mailing list might be able to answer for me.....I am basically trying to

Ted, Thanks for taking care of this. I found that in order to build clang (in addition to the vcproj changes I posted earlier today) I had to add a dependency such that the clangDriver project depends on the CodeGen (basically the CodeGen checkbox has to be checked in the list of the clangDriver's dependencies). This in effect adds codegen.lib to the list of libraries linked into clang.exe