Displaying 20 results from an estimated 5000 matches similar to: "BLAS / LAPACK version information from within R-session?"
2024 May 13
0
Change between 86152 and 86534 - probably 86265 - that looks for zspmv in BLAS and not LAPACK causes R with OpenBLAS to fail
Executive summary:
I believe revision 86265 makes it more difficult to build R with
OpenBLAS on Windows as now the entire LAPACK needs to be built to
obtain zspmv. Is there anything that can be done to allow the former
behavior to be used, something in Mkrules.local perhaps?
Detailed Explanation:
I have been building R with OpenBLAS for Windows 64 for over a decade
by patching
2010 May 06
2
help on compile r-2.10.0 on 64 bit window
Hi,
I tried to compile R-2.10.0 src on 64 bit window. After install Rtools and wingw-w64 compiler and put it the first of my PATH variable, but i got the following error when i tried to compile. Anything I missed? thank you.
x86_64-w64-mingw32-gcc -std=gnu99 -I../include -I. -I../extra -DHAVE_CONFIG_H -D
R_DLL_BUILD -O3 -Wall -pedantic -DR_ARCH='"x64"' -c malloc.c -o
2014 Jun 30
1
Building R on Windows: mkdir of Rtools creates directories with read-only permissions [WEIRD]
On Thu Jan 9 2014 03:47 Henrik Bengtsson wrote:
> This is is an issue that bugged me for a while. I encountered a year
> ago (April 2012) when I first tried to build R from source on Windows.
> I never figured out what the solution is or if I'm doing something
> wrong myself (but I have found a tedious workaround). I'm still on
> the same Windows 7 Ultimate machine with
2006 Sep 27
1
Building R-2.3.1 for Windows with ATLAS
Ok, moved to R-devel.
I tried to build R-2.3.1. Since I intent to distribute this tuned R to
all other who have a computer like mine here at work I thought it was
best to stay with the latest stable release.
About your suggestion, I could'n find xerblas.o file. And I don't know
how to edit libf77blas.a. I tried to open it with VIM
(http://vim.sf.net/) but there was a lot of strange
2011 Feb 10
1
BLAS optimization by CUBLAS
Dear colleagues!
In early 2009 there was a discussion about fast BLAS library initiated by
Sachin. He reported a faster BLAS library made by Nvidia CUBLAS library. Uwe
Ligges showed an interest for placing the optimized rblas.dll into
windows/contrib section managed by him. Unfortunately there is no any CUBLAS
version of rblas.dll in this section at present. So, is anybody interested
in CUBLAS
2006 Sep 26
1
Building R for Windows with ATLAS
I think this is not a R-devel question. Sorry to all if I'm wrong,
please let me know.
I managed to build R successfully with the default BLAS but when I
change the MKRULES to use ATLAS BLAS and set the path to
"C:/cygwin/home/Administrador/ATLAS/lib/WinNT_ATHLONSSE2" I got the
following error message (I'm posting only the final part, there was a
lot of compilation before this):
2012 May 09
2
R Installation Manual - ATLAS BLAS guidance that is not in the current version
Good afternoon.
I am trying to compile a version of Rblas.dll based on ATLAS for the Corei7. I had remembered that there was mention of which file to adjust and that "xerbla" needed to be removed from one of the outputs from the last time I tried a few years ago. The most recent version of the R Installation manual does not say anything about this. An older version (2.10 I believe) has
2009 Feb 20
1
Faster Blas Library
Hi everyone,
I have made a faster BLAS library thanks to Nvidia CUBLAS library. I was
wondering how I could upload this new Rblas.dll. I've included a powerpoint
presentation I made on the project.
Highlights include upto 2000% improvement in matrix multiplication timings.
Unfortunately the link included in the presentation is only accessible by
CSIRO employees only. I will gladly include
2019 Dec 30
2
how to check as CRAN with alternative BLAS?
One of my packages is slated to be archived from CRAN due to failures when
the ATLAS BLAS is used. I am unable to replicate the error on my machine
under R 3.6.1 using the atlas library from ubuntu (seems to be 3.10.2-9,
while the good professor is using 3.10.3 per
https://www.stats.ox.ac.uk/pub/bdr/Rblas/README.txt ). I also tried the
rocker/r-base with R 3.6.2
and
2024 May 08
1
Compilation problems with R4.4.0
? Wed, 8 May 2024 16:59:25 +0000
Simon Andrews <simon.andrews at babraham.ac.uk> ?????:
> The lapack libraries are:
>
> $ rpm -qa | grep lapack
> lapack-3.9.0-10.el9.x86_64
> lapack64_-3.9.0-10.el9.x86_64
> lapack64-3.9.0-10.el9.x86_64
> lapack-devel-3.9.0-10.el9.x86_64
Thanks for this information! I figured out I needed to enable the
"PowerTools/CRB" repo,
2020 May 26
2
Changing the BLAS from openblas on a F32 box
Dear list,
What is the recommended incantation on Fedora 32 to swap out the
openblas BLAS that the packaged (rpm) version of R-core installs for
ATLAS?
I'm running into some problems with some big models I want to fit
using the mgcv package, and openblas is apparently not thread safe and
is causing problems.
I have the following installed:
$ dnf list installed | grep ^R
R-core.x86_64
2014 Jan 09
0
Building R on Windows: mkdir of Rtools creates directories with read-only permissions [WEIRD]
This is is an issue that bugged me for a while. I encountered a year
ago (April 2012) when I first tried to build R from source on Windows.
I never figured out what the solution is or if I'm doing something
wrong myself (but I have found a tedious workaround). I'm still on
the same Windows 7 Ultimate machine with NTFS, but I now made sure I
started from scratch so I have a completely
2009 Jan 23
1
loading RBlas.dll
hi everyone,
Im implementing a new RBlas dll but just for optimising sake i need to know
how and WHERE (which source code) RBlas gets loaded. there is a call to
loadlibrary() in dynload.c BUT it seems this is not the function that is
loading Rblas.
how do i know this? well i added the code :(just after the loadlibrary()
call)
/*********************************************/
/*this
2003 Apr 22
4
"LAPACK routine DGESDD gave error code -12" with Debian (PR#2822)
Dear All,
Under Debian GNU/Linux La.svd (with method = "dgesdd") sometimes gives the
error
"Error in La.svd(data, nu = 0, nv = min(nrow, ncol), method = "dgesdd") :
LAPACK routine DGESDD gave error code -12"
It seems not to depend on the data per se, but on the relationship between
numbers of rows and columns.
For example, if the number of columns is 100,
2008 Jul 08
1
R crash with ATLAS precompiled Rblas.dll on Windows XP Core2 Duo
I noticed a problem using R 2.7.1 on Windows XP SP2 with the precompiled
Atlas Rblas.dll. Running the code below causes R to crash. I started R
using Rgui --vanilla and am using the precompiled Atlas Rblas.dll from
cran.fhcrc.org dated 17-Jul-2007 05:04 for Core2 Duo.
The code that causes the crash:
x <- rnorm(100)
y <- rnorm(100)
z <- rnorm(100)
loess(z ~ x * y)
loess(z ~ x) does
2006 Dec 13
1
Problem with tuned Rblas from CRAN with R-2.4.0
I encountered the following problem in R-2.4.0 for Windows binary downloaded from CRAN (data from R-help post by Ethan Johnsons). I was also using the contributed binary Rblas.dll for Intel P4 chip. The problem doesn't occur with the default Rblas.dll.
x=c(3.05176E-05, 0.000457764, 0.003204346, 0.0138855, 0.04165649, 0.09164429, 0.1527405, 0.1963806, 0.1963806, 0.1527405, 0.09164429,
2020 May 27
2
Changing the BLAS from openblas on a F32 box
Of course, even a simpler trick is to launch R as follows:
LD_PRELOAD=/lib64/atlas/libsatlas.so.3 R
and then the symbols in libsatlas take precedence over libopenblas. Or
a mix between both alternatives, i.e., setting
LD_PRELOAD=/path/to/some/link R
and then change that link to point to openblas, atlas... Whatever
suits you best.
I?aki
On Wed, 27 May 2020 at 11:00, I?aki Ucar <iucar at
2010 Apr 20
0
Building Rblas.dll failing on Windows 7 (64-bit)
I'm currently attempting to build R-2.10.1 from the source on Windows
7 (64-bit version). I've downloaded the latest Rtools (Rtools211.exe)
from the Murdoch-Sutherland site and have done a full install. I've
also downloaded the HTML Help Workshop, MikTeX, and the InnoSetup
installer.
I am not using any 64-bit versions of the tools, such as the
MinGW-w64, or a 64-bit version of TCL
2002 Jun 11
1
ATLAS & R unser Windows
Hi,
In rw-FAQ, there is a paragraph about optimizing R by using a fast ATLAS
library in place of the standard BLAS. It says: "BLAS support is supplied by
the single DLL `R_HOME\bin\Rblas.dll', and
you can add a fast BLAS just by replacing that." Do I need to recompile the
whole R with the option `USE_ATLAS = YES', or is it possible to compile only
Rblas.dll on each separate
2006 Mar 09
1
Linking Rblas
Dear all,
when making a DLL via Rcmd SHLIB is there a way to link against a
library such as Rblas (I am on a Windows platform) on a case to case
basis?
I played a bit around with some self-written C-code which should call
the function 'dasum' defined in Blas.h.
I encountered the following problem:
u:\codeplay>Rcmd SHLIB mysumming.c
Rcmd SHLIB mysumming.c
gcc --shared -s -o