similar to: R CMD SHLIB error using OS X

I'm trying to build a package. The machine is PowerPC G4 with Mac OS 10.4.8, and I'm using R2.4.1. I get "R CMD build roots" working, and it created roots.tar.gz. But I get the following message when I run "R CMD INSTALL -l ../myrlibrary roots.tar.gz" ====================================================================== * Installing *source* package 'roots'

I am trying to install two packages that are not available at CRAN (rmutil, dna). When trying the R CMD INSTALL with either file, I get an error message that ends with /usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: can't locate file for: -lgfortran /usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: file: -lgfortran is not an object file (not allowed in a library) Can anyone

Hello, I'm working with R, I try to call C from R. When I try to compile my file.c to make file.so, with the command : R CMD SHLIB foo.c return the message : gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined dynamic_lookup -single_module -multiply_defined

I sent the message below to r-sig-mac yesterday, but having no reply I decided to explore a bit myself and found that editing: /Library/Frameworks/R.framework/Versions/2.3/Resources/share/make/ shlib.mk yzzy: diff shlib.mk shlib.mk~ 3c3 < include $(R_HOME)/etc/Makeconf --- > include $(R_HOME)/etc${R_ARCH}/Makeconf restored the functionality of R CMD INSTALL. Is this a known issue?

I recently bought a new Intel Mac with OSX Leopard. I reinstalled the latest version of R and the Xcode tools. I'm trying to compile a C source code with the R compiler in X11, and I receive the following error message: [Macintosh:School Work 07-08/36-711/HW 3] dajmcdon% R CMD SHLIB McDonaldHW3.c gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp

I recently bought a new Intel Mac with OSX Leopard. I reinstalled the latest version of R and the Xcode tools. I'm trying to compile a C source code with the R compiler in X11, and I receive the following error message: [Macintosh:School Work 07-08/36-711/HW 3] dajmcdon% R CMD SHLIB McDonaldHW3.c gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp

(this after asking the package author) Hi I cannot install the rmvnorm package under R-2.3.0, or R-2.3.1 beta. It installs fine under R-2.2.1. transcript for installation under R-2.3.0 follows. Robin-Hankins-Computer:~/scratch% R --version R version 2.3.0 (2006-04-24) Copyright (C) 2006 R Development Core Team R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to

On an (Intel Leopard) Mac I try to build a package (mxFinance) which depends on another package (mxGraphics). The dependendy is 1) a 'Depends:' in DESCRIPTION and 2) an import in NAMESPACE. - The build fails if the dependent package (mxGraphics) is not installed in the R.framework Do I need to have installed all packages which are required by packages to be built binary (source builds

(1) ...need to speed up a monte-carlo sampling...any suggestions about how I can get R to use all 8 cores of a mac pro would be most useful and very appreciated... (2) spent the last few hours trying to get pnmath to compile under os- x 10.5.4... using gcc version 4.2.1 (Apple Inc. build 5553) as downloaded from CRAN, xcode 3.0... ...xcode 3.1 installed over top of above after

Hi all, I am attempting to install a package called phylobase from source directory. It all seems to work until the end, at which point it looks like the last compile command fails because the line is too long...perhaps because the g++ command line also includes "Loading ~/.Rprofile...", like this: ============================ g++ -arch i386 -dynamiclib

Please forgive me for posting this here if it is not appropriate (where should this question be posed?)? I am attempting to install rgdal (from source, since there is no binary) on Mac OS X 10.4.9 on a PowerPC G3 Macintosh. I have R version 2.4.1 (2006-12-18) installed. Following the install directions suggested at: http://www.sal.uiuc.edu/tools/tools-sum/rgeo/rgeo-detail/map-packages-on-cran

Hi, I'm wanting to call R from Perl via the RSPerl package. However I cannot seem to install it on my Macbook (OS X Tiger - R 2.6 - Perl 5.8.6). I try to install the source downloaded from the sigmahat website - but it seems to fail - when I search my system for R.pm - I can't find it? Something looks to be going wrong with the make bits? Cheers David M ---- $ R CMD INSTALL

Dear all, I'm trying to compile FORTRAN code to be used in R, failing miserably. I got a simple code function to try to figure out what is going wrong. Here is the code (available on the web) : subroutine bar(n, x) integer n double precision x(n) integer i do 100 i = 1, n x(i) = x(i) ** 2 100 continue end 1. I compiled the

Hello, I am trying to compile some F77 subroutines as shared objects for R on my Mac. --> Mac OS-X Version 10.4.11 (Tiger Intel Mac) I have done this (successfully) before on Sun Solaris and Linux Fedora systems using the following command. > R CMD SHLIB myfile.f I have g77 installed from this page. http://hpc.sourceforge.net/ I am using R 2.8.1, and I have installed all 4 additional

This is prompted by trying to run the 'inline' package on Mac OS X Leopard = with R 2.10.1. Mac uses completely crazy temp paths and R uses those as wel= l. The inline package creates source files in the temp directory which it t= hen compiles with R CMD SHLIB and attaches. The compilation fails with the = error message below which seems to be caused by the complexity of the path =

Jeff Brown wrote: > > Hi, > > I appear to be able to compile, load and call shared objects using SHLIB > and .Call: > >> code <- '#include <R.h>\n #include <Rdefines.h>\n SEXP f(){\n return >> R_NilValue ; }' >> writeLines( code, "test.c" ) >> system( "R CMD SHLIB test.c" ) > gcc -arch i386 -std=gnu99 >

Thanks for responding, Duncan, and clarifying that y'all need more info to help. I'm trying to compile binaries on os x 10.5.8 intel hardware that are compatible on ppc os x 10.4. When I include various flags to llvm-gcc, including: -m32 -arch ppc -isysroot /Developer/SDKs/MacOS10.4u.sdk -mmacosx-version-min=10.4 I am seeing errors when compiling using llvm-gcc 4.2. If I leave out

>> These results have far fewer failures than svn-trunk, and are also >> comparable to bootstrapping with gcc-4.6.2, summarized here: >> http://paste.lisp.org/display/126363 >> (Unfortunately, I no longer have the whole build/test log for the gcc46 bootstrap.) >> This consistency between different bootstraps of the release gives me >> some hope that g++-4.0.1 is

Full_Name: Jonathan Tuke Version: 2.4.0 OS: Mac OS X 10.4.8 Submission from: (NULL) (203.173.46.189) I am writing C code to implement in R. I am using R CMD SHLIB and then dyn.load("file.so"). The function I then call with .C("function"). Since I installed the latest R version, I have found that if I alter my C code and recompile, then use dyn.load("file.so"), the

I'm having some trouble getting llvm-gcc4 to compile. It's unable to compile darwin-crt3.c. It's mentioning "Complex expression. Absolute segment assumed." but I'm not sure if that's a real error message. Has anyone run into this before? I'm running on a G4 apple 10.4.8, kernel version 8.6.0. I googled around and found a bug with the same error message: