similar to: R callbacks

Dear list, I am trying to embed R into a C++ program. After some tinkering, reading the documentation and browsing the source code I have this more or less working. A very very condensed and very simplified version of the code is included below. The program can create plots. However, after the plot is initially drawn it is no longer updated. When scaling or updating the plot the window becomes

Hi, I think this is a bug (even though I can't find documentation explicitly saying that it should work). Basically, Rf_PrintValue(obj) fails when 'obj' is an S4 object that should be printed using show() rather than print(). From the error message I'm guessing that the need to use show is detected correctly but then show is not found. "cbind2" in the code below is just

***Summary:*** I'm setting up a cluster using netWorkSpace, and I'm having issues with the sleigh initialization. My R function to initialize the sleigh succeeds and the sleigh appears to be ready, but I get apparently conflicting information from "status(s)", "rankCount(s)", and "s"; and basic sleigh functions cause the sleigh to hang indefinitely. Also,

Dear list, I am trying to implement a publish-subscribe mechanism in for an embedded R interpreter. But somehow my registered closures seem to get collected by the GC, even though I have protected them. I have reducted my code to the following sample. Sorry if it is a little verbose. The first couple of call of calls still work, but at some point one of the callbacks (callback1 in my

Hello, I'm evaluating this expression expression({ for(x in 1:5){ .Call('rh_status','x') }}) a million times from a program with R embedded in it. I have attached reproducible code that crashes with Program received signal SIGSEGV, Segmentation fault. 0x00002b499ca40a6e in R_gc_internal (size_needed=0) at memory.c:1309 1309 FORWARD_NODE(R_PPStack[i]); Current language:

Dear R users, I have a response variable in a csv file called "y" and a matrix of predictor variables in a csv file called "mat". I have used the function "nls" I have specified the nonlinear relation between these variable.The code I have witten is called Rprog which begins with the phrase: L.minor.m1<-nls(Y~a ....etc.. The program when I execute the program, I

Hey all, Maybe someone has seen my problem before with OpenSSH under cygwin. I'm trying to use key-based authentication and it's failing. Configuration, permissions and -ddd information is provided in this email. Thanks, Brian Hayward ---------- Forwarded message ---------- Date: Thu, 9 Oct 2003 10:12:47 -0500 (CDT) From: hayward at slothmud.org To: cygwin at cygwin.com Subject: Re:

Hi, I am working on a 64-bit rocks cluster and am relatively new to the R package. I am trying to get Snow working with R and Rmpi and have run into the following issue. R is able to load the Rmpi and snow libraries and is able to run simple commands both interactively and batch as follows: -------------------------------------------------------------------------------------------------------

Hi all, Recently our statistics students noticed that their Gibbs samplers were crashing due to some NaNs in some parameters. The NaNs came from mvrnorm (Ripley & Venables' MASS package multivariate normal sampling function) and with some more investigation it turned out that they were generated by function eigen, the eigenvalue computing function. The problem did not seem to happen

Dear Luke and others, I have many R versions on my machine and want to start a particular one when snow builds its cluster. (The same version I start snow from.) It seems that everything is set up correctly in defaultClusterOptions: > mget(ls(defaultClusterOptions), defaultClusterOptions) $homogeneous [1] TRUE $manual [1] FALSE $master nodename "maya.unil.ch" $outfile [1]

Hello, the package snow is not working on a windows cluster with MPICH2 and Rmpi. There is an error in makeCluster: launch failed: CreateProcess(/usr/bin/env "RPROG="C:\Programme\R\R-2.5.1\bin\R" "OUT=/dev/null" "R_LIBS=" C:/Programme/R/R-2.5.1/library/snow/RMPInode.sh) on 'cl1' failed, error 3 - Das System kann den angegbenen Pfad nicht finden. I

Is there a reason why the fix for Bug 15899 - Omitted 'extern' on 'R_running_as_main_program' after refactor can cause linker errors for applications embedding R... https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=15899 was never back ported for R 3.3 for the R 3.2.1 release? Restoring that omitted 'extern' to the declaration of 'int

Dear R developers, this mail is basically a summary / clarification of some previous mails I sent to this list last week (subject "Catching warning and error output"). Duncan Murdoch pointed out that these were badly organized, and suggested I repost, collecting the main points previously spread out between several mails. Problem statement: In an application embedding R, I would

Full_Name: Jens Elkner Version: 2.10.1 OS: Solaris Submission from: (NULL) (87.188.113.172) elkner.idev2 elkner/build/R-2.10.1 > bin/exec/R -e Segmentation fault (core dumped) elkner.idev2 elkner/build/R-2.10.1 > dbx bin/exec/R core For information about new features see `help changes' To remove this message, put `dbxenv suppress_startup_message 7.7' in your .dbxrc Reading R core

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I've been trying to convert an existing set of mbox mail to maildir using dsync, but it seems to fail when it gets to the large boxes. $ dsync -Dv mirror maildir:~/Maildir Everything seems to work reasonably well until the first of the large boxes hits: dsync(jeff): Warning: Maildir /home/jeff/Maildir/.cron.2010-07-10: Synchronization took 1210 seconds (102289 new msgs, 0 flag change

Hello, I am very new to R but my question is with respect to the C API for working with an embedded R console. I have been able to start and stop an embedded R console from within a C program as well as use the API to execute commands in it. I am seeking a mechanism to individually send native R commands to an embedded console and then consume the output of these commands. Specifically, I

Hi everyone! I meet one problem when embedding R in C code, when I run the the R code in one child thread , it always print error info: Error: C stack usage is too close to the limit I also try to set R_CStackLimit = (uintptr_t)-1 to disable the C stack check as the R-exts doc say, but it still does not work, the error info still exist. Besides it is interesting that if i

Hi, I have tried to disable stack checking by set R_CStackLimit to -1. However, it always crashes my win32 multiple threads program. I am using R-2.5.0. My code looks like: #include <Rversion.h> #if (R_VERSION >= R_Version(2,3,0)) #define R_INTERFACE_PTRS 1 #define CSTACK_DEFNS 1 #include <Rinterface.h> #endif and then, add below line to my main function: R_CStackLimit =