similar to: Rmpi and OpenMPI ?

Hello R users and developers, I would like to install Rmpi so that I may take advantage of all of the CPUs in my computer, but I cannot get it to install and I am not very good with linux so it is adding to the headache. I have looked through the help archive, but I have not been successful at getting Rmpi to work. I am not sure if I am even installing openMPI correctly in linux. I would really

Hello, I try to install pbdMPI. Compilation successful, but load fails with segfault. Is anyone can help me? R version 3.0.0 pbdMPI version 0.1-6 Intel compiler version 13.1.1 OpenMPI version 1.6.4-1 CPU Intel x86_64 # R CMD INSTALL pbdMPI_0.1-6.tar.gz .. .... checking for gcc... icc -std=gnu99 checking whether the C compiler works... yes checking for C compiler default output file name...

I'm on libguestfs Fedora git master branch: $ git log | head -1 commit 8eb1aa2406632eb4202bbd976459334854295a77 $ yum-builddep libguestfs $ fedpkg local Results in: ========== . . . make[4]: Leaving directory `/home/kashyap/fedora-packaging/libguestfs/master/libguestfs-1.25.18/gobject' Making all in docs make[4]: Entering directory

1.I have a library fpmpi . I made the shared library fpmpi.so from this library.I am using ubuntu . 2.Now, I want to use in my R package .My R package has src folder the there is makevars.in file ### Setup R source code and objects. PKG_CPPFLAGS = @PKG_CPPFLAGS@ PKG_LIBS = -L/home/g/Desktop/Project -fpmpip ### For user configuration. USER_CONF = Makeconf ### Start making here. all:

Many thanks to Dr Yu for updating Rmpi for R 2.6.0, and for starting to make the changes to support Open MPI. I have just built the updated Debian package of Rmpi (i.e. r-cran-rmpi) under R 2.6.0 but I cannot convince myself yet whether it works or not. Simple tests work. E.g. on my Debian testing box, with Rmpi installed directly using Open Mpi 1.2.3-2 (from Debian) and using 'r' from

Hi I have a few problems installing/updating packages with complicated dependencies. For example, the Rmpi package: update.packages(...) checking for mpi.h... no configure: error: "Cannot find mpi.h header file" ERROR: configuration failed for package ?Rmpi? So I tried: >install.packages("Rmpi",configure.args="--with-mpi=/usr/lib/openmpi") Trying to find

Hi, somebody can help me. Idon't understand very well the manual of the this package, I suppose I must enter "wdtxtStart", before I start working, but is supposed that this command should open Word, but nothing happens. I use Rgui, not Rcmdr. Thanks ----- Mario Garrido Escudero PhD student Dpto. de Biolog?a Animal, Ecolog?a, Parasitolog?a, Edafolog?a y Qca. Agr?cola Universidad de

Hi all, I'm trying to get the snow package with mpi working on my linux ubuntu 10.04 machine. When I tried to install it (see below) it already had problems with the dependencies. R version 2.14.0 (2011-10-31) Copyright (C) 2011 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You

Hi I am trying to utilize my dual core processor (and later a High-performance clusters (HPC) ) by using the Rmpi, snow, snowfall, ... packages, but I am struggling at the beginning, i.e. to initialise the "cluster" on my dual core computer. Whenever I try to initialize it (via sfInit(parallel=TRUE, cpus=2) or mpi.spawn.Rslaves(nslaves=2) ), I get an error message: >

Hello, We have recently added a 64-bit 2 x Dual-Core Athlon server running Red Hat Enterprise Linux AS release 3 to allow for processing of large data sets (>4GB) in R. To integrate this server into our Linux cluster, I have been trying (unsuccessfully) to use Rmpi/lam-mpi to parallel process some of our scripts. While I have successfully compiled R 2.4.0 and lam-mpi 7.1.2 on this server using

On Thu, Jun 6, 2013 at 7:02 PM, upen <upendra.gandhi at gmail.com> wrote: > On Thu, Jun 6, 2013 at 5:38 PM, Gene Cumm <gene.cumm at gmail.com> wrote: >> On Jun 6, 2013 5:42 PM, "H. Peter Anvin" <hpa at zytor.com> wrote: >> > On 06/06/2013 02:40 PM, upen wrote: >> > > >> > > Some odd things I observed just now. >> > >

Hi, I am using the db backend for the expire plugin and found the following error message in the logfile: dovecot: Jan 22 10:10:55 Error: dict: secondary db: unable to allocate space from the buffer cache dovecot: Jan 22 10:10:55 Error: dict: Failed to initialize dictionary 'expire' dovecot: Jan 22 10:10:55 Error: IMAP(xxxxxxxxxx): read(/var/dovecot/dict-server) failed: Remote

I try to install Rmpi as root with install.packages("Rmpi"). It fails with: ... checking for x86_64-pc-linux-gnu-gcc -std=gnu99 option to accept ISO C89... none needed I am here /usr and it is OpenMPI Trying to find mpi.h ... Found in /usr/include Trying to find libmpi.so or libmpich.a ... Found libmpi in /usr/lib checking for openpty in -lutil... yes checking for main in -lpthread...

On Tue, Dec 31, 2013 at 04:29:37PM +0100, Kashyap Chamarthy wrote: > I'm on libguestfs Fedora git master branch: [...] > go install libguestfs.org/guestfs: open > /usr/lib64/golang/pkg/linux_amd64/libguestfs.org/guestfs.a: permission denied I believe this happens if you have golang-guestfs installed at the same time that you try to compile things locally. It's a serious design

As discussed in the emails today, this is the third version addressing most points from the v1/v2 review. You will need to pair this with the changes in libguestfs-common from this series: https://www.redhat.com/archives/libguestfs/2020-September/msg00050.html Rich.

Hi,My major problem with R was always the quality of the output. Recently I found R2wd, which solved this problem. R2wd makes it possible to write output directly to a word file, end to produce high-quality tables.I have two problems with R2wd, however.1. The documentation says it is possible to open an existing doc file in R2wd (wdGet(filename="hoepedepoep.doc")). This does not work

On Thu, Sep 17, 2020 at 01:39:56PM +0100, Richard W.M. Jones wrote: >As discussed in the emails today, this is the third version addressing >most points from the v1/v2 review. > >You will need to pair this with the changes in libguestfs-common from >this series: > >https://www.redhat.com/archives/libguestfs/2020-September/msg00050.html > I'm going to look at this, but

Hi, I am getting the following error: dovecot: Jul 23 18:04:44 Error: child 7600 (imap) killed with signal 10 How to reproduce: Try to delete or move a mail to another folder. The mail actually gets copied to the other folder but the original isn't removed (when using webmail). If using thunderbird this ends up in an infinite loop creating new mails in the destination folder (without

V; Sent via BlackBerry from T-Mobile -----Original Message----- From: r-help-request at r-project.org Date: Tue, 30 Sep 2008 12:00:06 To: <r-help at r-project.org> Subject: R-help Digest, Vol 67, Issue 31 Send R-help mailing list submissions to r-help at r-project.org To subscribe or unsubscribe via the World Wide Web, visit https://stat.ethz.ch/mailman/listinfo/r-help or, via email,

Hello list. I'm trying to rebuild the 2.6.9.67.0.20.EL kernel, but it fails even without modifications. How did I try it? Created a (non-root) build environment (not a mock ) Installed the kernel.scr.rpm and did a rpmbuild -ba --target=`uname -m` kernel-2.6.spec 2> prep-err.log | tee prep-out.log The build failed at the end: Processing files: kernel-xenU-devel-2.6.9-67.0.20.EL Checking