similar to: Subsetting a vector in C

Assume a C program invoked by .Call, that returns a list. Near the top of the program we allocate space for all the list elements. (It is my habit to use "xyz2" for the name of the R object and "xyz" for the pointer to its contents.) PROTECT(means2 = allocVector(REALSXP, nvar)); means = REAL(means2); PROTECT(u2 = allocVector(REALSXP, nvar)); u =

Hi, I have been studying the R manual on lists but cannot seem to create a simple R list in C - I keep on getting "'dimnames' applied to non-array" whenever I attempt to assign names to the list elements: Wanted output a list structure something like [ type="Bid", price=2.0, volume=1000 ] I can get up to a list of [ "Bid2, 2.0, 1000 ] But for the life of

I believe there is a memory leak in isoreg in the current version of R, as I believe the following shows > gc() used (Mb) gc trigger (Mb) max used (Mb) Ncells 120405 3.3 350000 9.4 350000 9.4 Vcells 78639 0.6 786432 6.0 392463 3.0 > for(k in 1:100) { + + y <- runif(10000) + isoreg(x,y) + } > rm(x) > rm(y) > gc() used (Mb) gc

Dear mailing list, I have a C function that gives me a wrong result when I run it under Windows 7. This is the code under Linux (RHEL5): > library(phenoTest) > data(epheno) > sign <- sample(featureNames(epheno))[1:20] > score <- getFc(epheno)[,1] > head(score) 1007_s_at 1053_at 117_at 121_at 1255_g_at 1294_at -1.183019 1.113544 1.186186 -1.034779 -1.044456

Hi I'm trying to develop some C code to find the fixpoint of a contraction mapping, the code compiles and gives the right results when executed in R. However R-gui session is frequently terminated. I'm suspecting some access violation error due to the exception code 0xc0000005 In the error report windows 10 gives me. It is the first time I'm writing any C-code so I'm guessing I

Dear R-help, how could I create an R call in C code using lang2 with 2 and more arguments? I tried this code: SEXP f(SEXP fn, SEXP rho) { SEXP R_fcall, x, y; PROTECT(R_fcall = lang2(fn, R_NilValue)); PROTECT(x = allocVector(REALSXP, 1)); PROTECT(y = allocVector(REALSXP, 1)); REAL(x)[0] = 10; REAL(y)[0] = 20; SETCADR(R_fcall, x); SETCADR(R_fcall, y);

A cut and paste typo has crept in and is rendering all values returned for the hypergeometric distribution incorrect. The problem is in src/main/arithmetic.c in the function "math4". The lines PROTECT(sy = allocVector(REALSXP, n)); a = REAL(sa); b = REAL(sb); c = REAL(sc); d = REAL(sc); /* <-- change this line */ y = REAL(sy); should

Hi all I recently started to write a matrix exponentiation operator for R (by adding a new operator definition to names.c, and adding the following code to arrays.c). It is not finished yet, but I would like to solicit some comments, as there are a few areas of R's internals that I am still feeling my way around. Firstly: 1) Would there be interest in adding a new operator %^% that performs

at lines 651 & 653 (integer_binary function): if (code == DIVOP || code == POWOP) ans = allocVector(REALSXP, n); else ans = allocVector(INTSXP, n); There are calls to warningcall() later in the function, which can trigger garbbage collection. Looks like the typical scenario where it seemed pretty safe to not PROTECT in the original version of the function but

It's tough to reliably reproduce, but I often get stack imbalance warnings when calling max.col() on non-real/double matrix. The code is conditionally PROTECTing but not incrementing its nprot counter for the eventual UNPROTECT. Pretty sure this would fix (but I haven't tested it): Index: array.c =================================================================== --- array.c (revision

Hi, I work with SEXP C code and with xts and quantmod packages. I try to touch how xts internal works. So we have R session and: > ls() character(0) > getSymbols('AAPL') # quantmod package [1] "AAPL" > ls() [1] "AAPL" > str(AAPL) An ?xts? object from 2007-01-03 to 2010-09-09 containing: Data: num [1:929, 1:6] 86.3 84 85.8 86 86.5 ... - attr(*,

Hi , For our production package i need to create a dataframein C . So I wrote the following code SEXP dfm ,head,df , dfint , dfStr,lsnm; *SEXP valueVector[2];* char *ab[3] = {"aa","vv","gy"}; int sn[3] ={99,89,12}; char *listnames[2] = {"int","string"}; int i,j; //============================= PROTECT(df = allocVector(VECSXP,2));

Full_Name: Naoki Takebayashi Version: 1.2.2 OS: Linux, RedHat 7.0/alpha Submission from: (NULL) (152.3.12.123) With RedHat 7.0/alpha (gcc 2.96-69), I encountered following error: gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -mieee -O2 -mieee -c datetime.c -o datetime.o datetime.c: In function `do_systime': datetime.c:306: parse error before `ans'

Hi, I am not sure if this is a bug and I apologize if it is something I didn't read carefully in the R extension manual. My initial search on the R help and R devel list archive didn't find useful information. I am using .Call (as written in the R extension manual) for the C code and have found that the .Call didn't release the memory claimed by allocVector. Even after applying

Hi, I am not sure if this is a bug and I apologize if it is something I didn't read carefully in the R extension manual. My initial search on the R help and R devel list archive didn't find useful information. I am using .Call (as written in the R extension manual) for the C code and have found that the .Call didn't release the memory claimed by allocVector. Even after applying

Hi R developers, I am new to this forum and hope someone can help me with .Call in R. Greatly appreciate any help! Say, I have a vector called "vecA" of length 10000, I generate a vector called "vecR" with elements randomly generated from Uniform[0,1]. Both vecA and vecR are of double type. I want to replace elements vecA by elements in vecR only if sum of elements in

Hi R-Users I wrote 1 week ago asking about a message that appears when I try run dyn.load. I'm trying to do an example in C code from "Writing R Extension" to learn how to do it. I have R 2.0.0, Rtools, Perl and MinGW as describe in http://www.murdoch-sutherland.com/Rtools/ with path sets. When I use C:\R\rw2000\bin>RCMD SHLIB -o C:/dev-cpp/teste.dll

Hi, I'm troubleshooting some native code on Windows that very occationally (and semi-randomly) crashes R. Already looked at "everything", I just want to double check that it is safe to UNPROTECT() allocated variables as soon as they are assigned to, say, a PROTECTed list. >From (R v2.3.0) Section 5.7.1 "Handling the effects of garbage collection" in "Writing R

Consider the C (or C++) code called from the .Call interface: SEXP foo() { SEXP *p = PROTECT(allocVector(REALSXP, 10)); ... UNPROTECT(1); return p; } Why is there no danger that the allocated memory will be garbage collected after the UNPROTECT, but before the return of p? I have used code like this for some time and have never had a problem, but I'm not sure if/why it is guaranteed

Hi folks: I am just beginning to try and use R from my own C programs. Platform is Windows2000, compiler Visual C++ 6.0. I built the import library R.lib from R.dll using the VC LIB.exe program. Here is a simple code I am trying to compile and run (no C++, VC++ is instructed to treat it strictly as C): #include "R.h" #include "Rinternals.h" int main(void) { int i; char