similar to: Install R-patched_2006-07-13 on i386-pc-solaris2.10 with Sun Studio 11

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Dear all, I coded a function called u.glm u.glm <- function (x,ahi,age,bmiz,gender) { library(nortest) lil.rslt <- lillie.test(x) if (lil.rslt$p.value >0.05) { cat("Logtrans=0, lillie=",lil.rslt$p.value,"\n") xmodel<-glm(x~ahi+age+bmiz+as.factor(gender)) summary(xmodel) confint(xmodel) } else { cat("Logtrans=1,

Apologies if this is not the best list on which to ask for help. I have compiled R 2.6.0 using Sun Studio 12 compilers. I can install most CRAN and bioconductor packages that I need, with the exception of RSQLite. Unfortunately this is critical for other packages that I need. I have tried to compile it using R CMD INSTALL to generate a config.log file. I don't know how to fix the reported

I am encountering a make error on an AIX 5.2 with R-2.3.0 and R-patched_2006-05-10 after successfully configuring them using gcc-4.1.0, gnu make, and the following configure options CC=/usr/local/bin/gcc F77=/usr/local/bin/gfortran CXX=/usr/local/bin/g++ MAIN_LDFLAGS=-Wl,-brtl SHLIB_LDFLAGS=-Wl,-G CFLAGS='-g -O' FFLAGS='-O' CXXFLAGS='-g -O' bash-3.00$ ./configure

Hi I am estimating the following coxph function with stratification and frailty?where each person had multiple events. m<-coxph(Surv(dtime1,status1)~gender+cage+uplf+strata(enum)+frailty(id),xmodel) ? > head(xmodel) id enum dtime status gender cage uplf 1 1008666 1 2259.1412037 1 MA 0.000 0 2 1008666 2 36.7495023 1 MA 2259.141 0 3 1008666

Hi thanks for your posts so far. Since what I had assumed was a 32 bit kernel which I compiled didn''t work, I religiously set out on compiling a 64 bit version as my system is currently booted in 64 bit mode. I installed SUNStudio12 on the system and set the SPRO_VROOT to point towards it and when I do a make all in usr/src directory, I get the following error when make cwds and runs in

Sandeep Patel wrote: > My goal is to have Cortex-A9 support complete in far less than three > months. I've recently gotten some additional help toward that goal, so > the pace should pick up soon. > > As far as compiler texts, there are many newer texts to recommend as > just about all the major optimization passes are done differently > after SSA-form appeared in about

Hello! I was trying to build OpenOffice using all of my 4 CPUs. To be able to do other work on the machine comfortably, I ran the build under nice, and assigned real-time priority to the two Xorg processes. The build started at about 23:10 last night, and hung at 23:46. The procstat output for the make's process group is: PID PPID PGID SID TSID THR LOGIN WCHAN EMUL

----- Original Message ---- > From: Chuck Robey <chuckr at telenix.org> > To: LLVM Developers Mailing List <llvmdev at cs.uiuc.edu> > Sent: Friday, May 22, 2009 9:22:53 AM > Subject: Re: [LLVMdev] Arm port > > OK, I've got enough to go on with, and I'm getting ready right now to begin > reading the dragon book, but one question bothers me regarding the

Which platform? If on Solaris 10 sparc, GCC (either from Sun or sunfreeware.com) should be 64-bit by default. GCC from Sunfreeware for Solaris 10 x86 will compile 32-bit by default. For Solaris, you are better off using Sun Studio and Dmake. Actually, you are better off just using the compiled version from Oracle/Sun. On 06/13/12 02:08, prabu.murugan at emc.com wrote: > Hi, > >

Hello, When I try: geno <-read.table("2500.geno.tab",header=TRUE,sep="\t",na.strings=".",quote=" ",comment.char="",colClasses=c("factor"),nrows=2501) I get, after hour(s) of work: Error: cannot allocate vector of size 9 Kb I have: Rgui.exe --max-mem-size=3Gb and multi(0)disk(0)rdisk(0)partition(1)\WINDOWS="Microsoft

All, I need to build samba 3.6.12 on solaris 8 using studio 12. Has anyone accomplished this and willing to share tips, tricks, or notes? -Kevin

Hi, I recently compiled dovecot-2.1.1 on Solaris 10 with Sun Studio, but when I want to compile Sieve for this version (dovecot-2.1-pigeonhole-0.3.0) I get an error: "sieve.c", line 578: identifier redeclared: sieve_multiscript_run and I see that declaration in sieve.h is different from definition in sieve.c, so compilation process fails with SunStudio cc compiler. I have done a

I am trying to get R-2.2.1 to pass make check on an AIX 5.2 at work (I know R-2.2.1 is not the latest release, but I encountered make errors in my attempts to install either R-2.3.0 or the R-patched_2006-05-10 on the version of AIX I am on. I will post those errors in a separate posting from this.) So far, configure and make finish without error for R-2.2.1 using gnu make, gcc-4.1.0, and

Dear all, I am trying to compile R version 1.0.1 under Solaris on a SUNsparcUltra10. Note that I'm doing this in my home directory as I cannot do it as root. The configure script seems to run correctly and issues as the last few lines: ----------------------------------------------- ... R is now configured for sparc-sun-solaris2.7 Source directory: . Installation directory:

I came across this in connection with an unrelated issue > beta[2] Error in beta[2] : object is not subsettable > beta[2] <- 5 Error in "[<-"(`*tmp*`, 2, value = 5) : object is not subsetable One of the messages must be wrong, but I need a native English speaker to tell me which one. -- O__ ---- Peter Dalgaard Blegdamsvej 3 c/ /'_ --- Dept. of

After building and bfu''in the lastest ON build, any time I run a dtrace script I get a Seg Fault. Is there a dtrace for dtrace :) Doug root at prae> dtrace -n ''syscall::open*:entry { printf("%s %s",execname,copyinstr(arg0)); }'' Segmentation Fault (core dumped) root at prae> pstack core core ''core'' of 101364: dtrace -n

Hello, Did anybody outside SUN tried to build xen-src (osox-src-2006-08-16)? I had tried it on x86_64 machine. I am running SXCR46 (I know that it says that SXCR 44 is needed, but I hope that this is a minimum requierment, even that it doesn''t say it explicitly, and that SXCR 46 is also good. BTW, Am I right in this ? ) ; I ran "nightly opensolaris.sh &". My

Hi, I have problems compiling speex 1.2rc1: > /opt/studio/SOS11/SUNWspro/bin/cc -DHAVE_CONFIG_H -I. -I. - > I.. -I../include -I../include -I.. -I/opt/csw/include -I/opt/csw/ > include -xO3 -xarch=v8 -I/opt/csw/include -c skeleton.c > /bin/bash ../libtool --mode=link /opt/studio/SOS11/SUNWspro/bin/cc - > xO3 -xarch=v8 -I/opt/csw/include -xarch=v8 -L/opt/csw/lib -o

Full_Name: rodney sparapani Version: 1.9.0 OS: Solaris 9 Submission from: (NULL) (141.106.120.97) I'm following the instructions for the Sun Forte compiler. I had success with 1.8.1 so I think the compiler settings are correct (config.site): CC="cc -xarch=v8plusa" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v8plusa" FFLAGS="-xO5