Displaying 20 results from an estimated 500 matches similar to: "problem building R-patched on x86-64 with PGI 6.1"
2006 Mar 09
1
R2.2.1-patched build failed with PGI 6.1 on x86-64
Hi All,
While attempting to build R-patched using the Portland Group compiler suite
on our dual Opteron 250 box running Scyld 29cz5 (based on RH, kernel
2.4.29), I get:
make[5]: Leaving directory
`/home/andy/Rbuild/R221-pgi/src/library/tools/src'
make[5]: Entering directory
`/home/andy/Rbuild/R221-pgi/src/library/tools/src'
pgcc -I../../../../include -I/include -I/include/CC -fpic
2006 May 11
0
PGI 6.1 compile error
I am trying to compile R-2.3.0 (both first release and patched
2006-05-10) on Red Hat Enterprise Linux AS release 3 (Taroon Update 7)
using the Portland Group compiler version 6.1 and the notes from
Jennifer Lai on p33 of "R Installation and Administration" version 2.3.0
(2006-04-24). I have not used this compiler before, so it is possible
things are messed up more than usual, even
2006 May 18
0
R-devel and PGI 6.0 compile error
I am trying to compile R-devel (R-devel_2006-05-17.tar.gz) on Red Hat
Enterprise Linux AS release 3 (Taroon Update 7) using the Portland Group
compiler 6.0. (I have not yet successful compiled R on this
configuration, so I don't know if this is a new problem.) I get an error
pgcc -L/usr/local/pgi/linux86-64/6.0/libso -L/usr/lib64 -o dftables
dftables.o
../dftables chartables.h
2007 Nov 26
1
Problem with configure's detection of glob on 2.6.0 (PR#10468)
Full_Name: Mike Pacey
Version: 2.6.0
OS: SuSe Linux 9.3 x86_64
Submission from: (NULL) (194.80.32.10)
A "vanilla" version of R configures and compiles without a problem on my system.
Switching to using the PGI compiler configures correctly (see the values at the
bottom fo thismessage), but compilation aborts with:
pgcc -I../../src/extra/zlib -I../../src/extra/bzip2
2008 Dec 09
1
errors with compilation
Hi,
i'm trying to compile R on a Cray XT3 using pgi/7.2.1 - CNL (compute
node linux)
The R version is 2.8.0
this is the option
-enable-R-static-lib=yes
--disable-R-shlib
CPICFLAGS=fpic
FPICFLAGS=fpic
CXXPICFLAGS=fpic
SHLIB_LDFLAGS=shared
--with-x=no
SHLIB_CXXLDFLAGS=shared
--disable-BLAS-shlib
CFLAGS="-g -O2 -Kieee"
FFLAGS="-g -O2 -Kieee"
CXXFLAGS="-g -O2
2005 Aug 23
1
compile R with Portland Group compiler
Hi,
Can anyone advise me on how to compile R with Portland Group
compiler on a Opeteron machine with Red Hat Enterprise Linux WS release
4 installed?
I've edit config.site file to pick portland group compilers instead of
gcc. Here is the list of modified flags:
CC=/usr/pgi/linux86-64/6.0/bin/pgcc
CFLAGS='-g -O2'
CPPFLAGS='-I/usr/pgi/linux86-64/6.0/include
2005 Aug 31
1
Build Portland Group Compiler
Hi,
I built R with Portland Group compiler, but I noticed one thing that
when I ran configure for the first time on AMD machine, I got the
following error:
checking whether the C compiler works... configure: error: cannot run C
compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details.
so I tried to set host=x86_64-unknown-linux-gnu,
2005 Sep 02
0
Build R with ATLAS
Hi,
I followed this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028942.html, to
compile ATLAS with gcc and g77 on AMD Opteron. I then followed the
instructions on this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028966.html, to
convert static libraries to dynamic libraries.
However, when I tried to configure R-devel, I got the following error
2005 Oct 12
0
additional comments on building R with PGI compiler
Hi,
I have additional comments on building R with PGI compiler.
If one wants to use external BLAS library, then pgf90 instead of pgf77
should be used, and BLAS_LIBS flags should be set.
e.g.
F77 = $PG_HOME/bin/pgf90
BLAS_LIBS='-L/opt/acml2.7.0/pgi64/ -lacml' # for ACML library
BLAS_LIBS='-L/usr/lib64 -lg2c -lblas' # for generic BLAS
library that comes
2009 Feb 11
1
Problem with R using pgi compiler on x86_64
Hi,
we have installed R-2.8.1 using the current pgi compiler (8.0.2) for
AMD64 on a SLES9 system.
When I try to install "Matrix" everything is fine until the last step.
make[1]: Leaving directory `/tmp/R.INSTALL.TW3399/Matrix/src/AMD'
pgCC -L/usr/lib64 -L/usr/X11R6/lib64 -pgf90libs -o Matrix.so
CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o
chm_common.o
2008 Oct 30
1
Compiling R Packages
I am working on a SLES 10 cluster with R available on it. To better use my resources, I want to use Rmpi, but I am having a difficult time installing it. I have set the $R_LIBS variable correctly.
The MPI libraries are available through the PGI compiler, but this R instance was compiled with GCC.
The Rmpi package can be compiled and installed with
%R CMD INSTALL Rmpi_0.5-5.tar.gz
2005 Sep 06
1
Build R with AMD pgi compiled ACML library
Hi,
Has anyone had any luck in using portland group compiler to build
R(-devel) with AMD's pgi compiled ACML library? I've downloaded the
packages and set LD_LIBRARY_PATH, and run configuration script as follow:
% ./configure --prefix=/usr/local/R.pgcc --with-blas='-lacml'
However, it failed to pick up double complex BLAS,
checking for sgemm_ in -lacml... yes
checking
2017 Dec 21
3
Building R from source with the PGI compiler
Hello
I would like to build R from source and use the PGI compiler, rather than
the GCC compiler.
I saw the instructions for the Intel compiler in the R Installation Manual,
but I didn't see the PGI. I tried a few times without instructions, but
without success.
Any suggestions would be most welcome. Also, I hope this is the right
group for the question.
Sincerely,
Erin
--
Erin
2004 Apr 03
0
problem compiling R-1.9.0beta with PGI compilers on amd6 4
> From: Prof Brian Ripley [mailto:ripley@stats.ox.ac.uk]
>
> On Fri, 2 Apr 2004, Liaw, Andy wrote:
>
> > Dear R-devel,
> >
> > I'm trying to compile R-1.9.0beta (2004-03-31) with the PGI
> compilers
> > (15-day free evaluation: after the 15 days the binaries
> will stop working).
> > I'm running into some problems, that I hope some can
2005 Nov 10
2
make check failed on linux-amd64 using PGI compilers
Dear R-help,
I am trying to build R-2.2.0-patched (2005-11-07 r36217) on the head node of
a Scyld cluster (dual Opteron 250s) using PGI compilers (v6.0). I used the
flags suggested by Jennifer Lai on R-devel (taken from R-admin, except that
I had to add -L/usr/X11R6/lib64 to LDFLAGS). The build went fine, but make
check-all failed when running tests/Examples/graphics-Ex.R, at:
> plot(1:2,
2004 Apr 02
1
problem compiling R-1.9.0beta with PGI compilers on amd64
Dear R-devel,
I'm trying to compile R-1.9.0beta (2004-03-31) with the PGI compilers
(15-day free evaluation: after the 15 days the binaries will stop working).
I'm running into some problems, that I hope some can offer pointers.
1. After configure, the FLIBS include /usr/local/lib' --- note the extra '.
I had to manually delete it in a couple of places.
In a previous thread on
2008 Apr 07
2
CentOS, Postgres init and puppet
Me again!
I have a recipe that looks like:
class postgresql {
file { pg_hba_conf:
name => "/var/lib/pgsql/data/pg_hba.conf",
source =>
"puppet://puppetmaster/files/workstations/common/var/lib/pgsql/data/pg_hba.conf",
owner => postgres,
group => postgres,
mode => 600,
subscribe => [ Package[postgresql] ],
2015 Nov 14
2
Adapting and open-sourcing PGI's Fortran frontend for LLVM
----- Original Message -----
> From: "Alex Bradbury" <asb at asbradbury.org>
> To: "Hal Finkel" <hfinkel at anl.gov>
> Cc: "LLVM Dev" <llvm-dev at lists.llvm.org>, "flang-dev" <flang-dev at googlegroups.com>, "Rob Neely" <neely4 at llnl.gov>,
> "douglas miles (PGI)" <douglas.miles at
2015 Nov 13
7
Adapting and open-sourcing PGI's Fortran frontend for LLVM
Hi everyone,
I have some very good news for everyone interested a production-quality Fortran frontend for LLVM:
The U.S. Department of Energy’s National Nuclear Security Administration and its three national labs have reached an agreement with NVIDIA's PGI division to adapt and open-source PGI's Fortran frontend, and associated Fortran runtime library, for contribution to the LLVM
2016 May 26
2
Adapting and open-sourcing PGI's Fortran frontend for LLVM
Hi Hal,
I haven't been following this closely, but has there been any updates recently.
Regards,
Chad
-----Original Message-----
From: llvm-dev [mailto:llvm-dev-bounces at lists.llvm.org] On Behalf Of Chris Lattner via llvm-dev
Sent: Sunday, November 15, 2015 12:46 AM
To: Hal Finkel <hfinkel at anl.gov>
Cc: LLVM Dev <llvm-dev at lists.llvm.org>; flang-dev <flang-dev at