similar to: Updated rawConnection() patch

I've just implemented a generalization of R's text connections, to also support reading/writing raw binary data. There is very little new code to speak of. For input connections, I wrote code to populate the old text connection buffer from a raw vector, and provided a new raw_read() method. For output connections, I wrote a raw_write() to append to a raw vector. On input, the mode

problem of the very large memory require by the Sign extension. --- R-2.5.0.orig/src/main/serialize.c 2007-03-27 01:42:08.000000000 +0900 +++ R-2.5.0/src/main/serialize.c 2007-06-25 00:48:58.000000000 +0900 @@ -1866,7 +1866,7 @@ static void resize_buffer(membuf_t mb, int needed) { - int newsize = 2 * needed; + size_t newsize = 2 * needed; mb->buf = realloc(mb->buf,

I've noticed that the processing time for the default capture.output() grows exponentially in the number of characters outputted/captured. The default settings sinks to a temporary textConnection(). When instead sinking to a rawConnection(), the processing time becomes linear. See below example and attached PNG figure [also at

The patch below adds support for custom HTTP headers in download.file() and url(). My main motivation for this is performing basic http authentication. Some web sites do not support embedding the credentials into the URI itself, they only work if the username and password are sent in the HTTP headers. In fact specifying the username and password in the URI has been

Hi, I want to keep a running file of some statistics generated by a running process. Occasionally the process will be restarted. On restart, I'd like to read the last line of the log file to set some variables to their last state, and then continue to append values to that same file. I can't seem to get the appending part to work. I can read values form the file, but then upon the

Dear All, I have written the following programs to find a non-singular (10*10) covariance matrix. Here is the program: nitems <- 10 x <- array(rnorm(5*nitems,3,3), c(5,nitems)) sigma <- t(x)%*%x inverse <- try(solve(sigma), TRUE) while(inherits(inverse, "try-error")) { x <- array(rnorm(5*nitems,3,3), c(5,nitems)) sigma <- t(x)%*%x inverse <-

Hello, Does anyone knows how to deal with zero subscript in R. I have this code: for (i in 1:nitems){ + for (j in 1:ncat-1) { + draw<-matrix(rnorm(nitems*(ncat-1),seed1,seed2),nitems,(ncat-1)) + d<-( sigma_d*draw ) + mu_d + draw<-matrix(rtnorm((nitems*(ncat-1)),mean = seed1, sd = seed2, lower = .1, upper = 1.5),nitems,(ncat-1)) +

Daniel, Tobias, Renato and myself have been looking a little bit at the potential underlying reason for why http://llvm.org/perf/ is instable, and have found some clues. I want to share them here to give people with more experience in the frameworks used by LNT (flask, sqlalchemy, wsgi, .) a chance to check if our reasoning below seems plausible. Daniel noticed the following backtrace in the

Hi, I'm on a Ubuntu 18.04 server, trying to use django-haystack with xapian in a python3.6 virtualenv. The virtualenv is set up not to use system packages, meaning that I can't just install python3-xapian-haystack with apt, and instead have to manually build xapian-core and xapian-bindings within the virtualenv. This works with xapian-core and the --prefix argument to configure. When I

I have a couple of packages (?fiery? and ?reqres') that uses a mock of a rook request for their examples. The mock is an R6 object containing a rawConnection, along with a finalizer that closes this connection when the object is removed. So far so good. I?ve recently been getting CRAN errors due to the rawConnection not being closed in examples > cleanEx() Error: connections left open:

Thought I'd try and start a discussion. Feel free to jump in. I guess R needs to strike the right balance between opening up the internals to package writers and not allowing them to do bad things. My first attempt at cracking this nut is to just memcpy() the Rconnection and not allow access to the private stuff: /* Alternative to allowing C code access to connection API. */ Rconnection

Hi all, first of all: Sorry for my bad englis, and now the Question: I have some problems with running R from Java. First i tried using rJava (JRI). But the examples didnt work properly. Now im trying to establish a connection by using Rserve and JRclient (RF503). I have the following code, which i`ve found: ------------------------------------------------------------------------ public

Hi, I am facing one problem of fetching R warning messages in Java Code using Rserve. It is easier to trap R Error messages by using catching RSrvException. I came to know one way of fetching R Warning messages, i.e. using "withCallingHandlers", below is my Java Program, which uses withCallingHandlers of R : import org.rosuda.JRclient.*;

>> I am trying to install the libguestfs python bindings in my >> virtualenv. Since this cannot be done through PIP, > > The PIP problem is https://bugzilla.redhat.com/show_bug.cgi?id=1075594 > Unfortunately we are stuck here because the pypi website still has a > license that we cannot live with (it would have the effect of > assigning all work we upload to them). They

On 12/11/2018 8:09 AM, Thomas Lin Pedersen wrote: > I have a couple of packages (?fiery? and ?reqres') that uses a mock of a rook request for their examples. The mock is an R6 object containing a rawConnection, along with a finalizer that closes this connection when the object is removed. So far so good. I?ve recently been getting CRAN errors due to the rawConnection not being closed in

> > After using 'python sdist', can't you use the tarball (in python/dist) > > in order to create a venv directly? > > I think I will be able to install the python library in the venv using > the tarball. However, won't my liguestfs application require some of > the binaries installed as part of 'make install' for running? I am > trying to not

Hi. I nearly have Rserve working.... I have the dialog box which says.. Rserve: Ok, read to answer queries. Having read all i can find, I followed the guidance given on http://rosuda.org/Rserve/example.shtml I tried to follow the first example but I am getting an error descirbed below. My IDE looks like this: http://www.nabble.com/file/p10705244/ide.jpg However, when I try and compile my

You are entering the quoting hell - you are missing quotes and escapes for \n. it would be much more reasonable to use the rConnection.assign method instead of pasting any content through the parser. Cheers, Simon > On Oct 26, 2017, at 9:59 AM, Morkus via R-devel <r-devel at r-project.org> wrote: > > That's amazing! Thank you!!! > > One follow up question, if

Thanks! I just figured it out (thanks to "Beyond Compare") and was coming here to post back. The boxM test doesn't work with that (now, finally working) REXP structure, but I probably now need to create a table or something and parse that structure. So much fun! :) Thanks again. - M Sent from [ProtonMail](https://protonmail.com), Swiss-based encrypted email. > --------

Version 3.1.0 of R has imposed a very small data limit on writing to fifos on Linux. Consider the following R code (Assumes that "ff" is a fifo in the R process's current directory): con <- fifo("ff", "a+b") writeBin(raw(12501), con) In R 3.0.3, this returns without error and the data is available on the fifo. In R 3.1.0, however, this returns the following