similar to: Bug in copying of S4 objects (PR#8112)

Displaying 20 results from an estimated 30000 matches similar to: "Bug in copying of S4 objects (PR#8112)"

2015 Jun 30
2
Defining a `show` function breaks the print-ing of S4 object -- bug or expected?
Same thing happens with S3 if you redefine print(). I thought that code was actually calculating the function to call rather than the symbol to use, but apparently not. Shouldn't be too hard to fix. luke On Tue, 30 Jun 2015, Hadley Wickham wrote: > On Tue, Jun 30, 2015 at 2:20 PM, Duncan Murdoch > <murdoch.duncan at gmail.com> wrote: >> On 30/06/2015 1:57 PM, Hadley
2015 Jun 30
2
Defining a `show` function breaks the print-ing of S4 object -- bug or expected?
On 30/06/2015 5:27 PM, Lorenz, David wrote: > There is something I'm really missing here. The function show is a > standardGeneric function, so the correct way to write it as method like > this: That describes methods::show. The problem is that the default print mechanism isn't calling methods::show() (or base::print() as Luke says), it's calling show() or print() in the
2019 Nov 01
4
[External] R C api for 'inherits' S3 and S4 objects
Thank you Luke. That is why I don't use Rf_inherits but INHERITS which does not allocate, provided in the email body. I cannot do similarly for S4 classes, thus asking for some API for that. On Fri, Nov 1, 2019 at 5:56 PM Tierney, Luke <luke-tierney at uiowa.edu> wrote: > > On Fri, 1 Nov 2019, Jan Gorecki wrote: > > > Dear R developers, > > > > Motivated by
2015 Jun 30
1
Defining a `show` function breaks the print-ing of S4 object -- bug or expected?
On 30/06/2015 7:04 PM, Paul Gilbert wrote: > > > On 06/30/2015 11:33 AM, Duncan Murdoch wrote: >> On 30/06/2015 5:27 PM, Lorenz, David wrote: >>> There is something I'm really missing here. The function show is a >>> standardGeneric function, so the correct way to write it as method like >>> this: >> >> That describes methods::show. The
2015 Jun 30
2
Defining a `show` function breaks the print-ing of S4 object -- bug or expected?
On 30/06/2015 1:57 PM, Hadley Wickham wrote: > A slightly simpler formulation of the problem is: > > show <- function(...) stop("My show!") > methods::setClass("Person", slots = list(name = "character")) > methods::new("Person", name = "Tom") > #> Error in (function (...) : My show! Just to be clear: the complaint is
2019 Nov 01
3
R C api for 'inherits' S3 and S4 objects
Dear R developers, Motivated by discussion about checking inheritance of S3 and S4 objects (in head matrix/array topic) I would light to shed some light on a minor gap about that matter in R C API. Currently we are able to check inheritance for S3 class objects from C in a robust way (no allocation, thread safe). This is unfortunately not possible for S4 classes. I would kindly request new
2018 Mar 18
3
`@<-` modify its argument when slot is externalptr
Dear all, I am confused about the inconsistent behaviors of `@<-` operator when used in different ways. Consider the following example: library(inline) # Function to generate an externalptr object with random address new_extptr <- cfunction(c(), ' SEXP val = PROTECT(ScalarLogical(1)); SEXP out = PROTECT(R_MakeExternalPtr(&val, R_NilValue, val)); UNPROTECT(2);
2015 Jan 22
5
:: and ::: as .Primitives?
Hi all, When S4 methods are defined on base function (say, "match"), the function becomes a method with the body "base::match(x,y)". A call to such a function often spends more time doing "::" than in the function itself. I always assumed that "::" was a very low-level thing, but it turns out to be a plain old function defined in base/R/namespace.R. What
2015 Jan 22
5
:: and ::: as .Primitives?
On Thu, Jan 22, 2015 at 11:44 AM, <luke-tierney at uiowa.edu> wrote: > > For default methods there ought to be a way to create those so the > default method is computed at creation or load time and stored in an > environment. We had considered that, but we thought the definition of the function would be easier to interpret if it explicitly specified the namespace, instead of
2015 Jan 22
1
:: and ::: as .Primitives?
On Thu, Jan 22, 2015 at 11:44 AM, <luke-tierney at uiowa.edu> wrote: > I'm not convinced that how to make :: faster is the right question. If > you are finding foo::bar being called often enough to matter to your > overall performance then to me the question is: why are you calling > foo::bar more than once? Making :: a bit faster by making it a > primitive will remove
2019 Sep 15
2
[External] REprintf could be caught by tryCatch(message)
Thank you Luke for prompt reply. Is it possible then to request a new function to R C API "message" that would equivalent to R "message" function? Similarly as we now have C "warning" and C "error" functions. Best, Jan On Sun, Sep 15, 2019 at 5:25 PM Tierney, Luke <luke-tierney at uiowa.edu> wrote: > > On Sun, 15 Sep 2019, Jan Gorecki wrote:
2020 Apr 06
2
Help useRs to use R's own Time/Date objects more efficiently
> (1) Create a top-level help page with a title like "Date and Time > Classes" to give a brief but general overview. This would mean the > existing DateTimeClasses would need a new title. I wanted to modify my first suggestion. Perhaps a better idea would be to reference an external document giving an overview of the subject. I couldn't find a discussion of POSIXct/POSIXlt
2007 Mar 20
1
cbind() & rbind() for S4 objects -- 'Matrix' package changes
As some of you may have seen / heard in the past, it is not possible to make cbind() and rbind() into proper S4 generic functions, since their first formal argument is '...'. [ BTW: S3-methods for these of course only dispatch on the first argument which is also not really satisfactory in the context of many possible matrix classes.] For this reason, after quite some discussion on
2020 Oct 29
2
[External] Something is wrong with the unserialize function
This Index: src/main/altrep.c =================================================================== --- src/main/altrep.c (revision 79385) +++ src/main/altrep.c (working copy) @@ -275,10 +275,11 @@ SEXP psym = ALTREP_SERIALIZED_CLASS_PKGSYM(info); SEXP class = LookupClass(csym, psym); if (class == NULL) { - SEXP pname = ScalarString(PRINTNAME(psym)); + SEXP pname =
2019 Sep 08
1
[External] Missing function Rf_findFun3
I am not using the C API from a package but with an embedded R. Why have it declared in the include/ if it cannot be accessed then? Best, Laurent On Sun, Sep 8, 2019, 8:27 AM Tierney, Luke <luke-tierney at uiowa.edu> wrote: > On Sat, 7 Sep 2019, Laurent Gautier wrote: > > > Hi, > > > > > > The function `Rf_findFun3` is declared in > > `$(R CMD CONFIG
2018 Jul 26
2
Possible bug: R --slave --interactive stdin echo on Linux when stdin is a fifo
On Thu, 26 Jul 2018, G?bor Cs?rdi wrote: > On Thu, Jul 26, 2018 at 12:25 PM Barry Rowlingson > <b.rowlingson at lancaster.ac.uk> wrote: >> >> On Thu, Jul 26, 2018 at 12:22 AM, G?bor Cs?rdi <csardi.gabor at gmail.com> wrote: >>> I am trying to control a background R session, connected via a fifo / >>> named pipe. >> >> Is the fifo
2020 Nov 13
3
exists, get and get0 accept silently inputs of length > 1
Dear R-devel, The doc of exists, get and get0 is unambiguous, x should be an object given as a character string. However these accept longer inputs. It can lead an uncareful user to think these functions are vectorized when they're not, and generally lets through bugs that one might have preferred to trigger earlier failure. ``` r exists("d") #> [1] FALSE exists(c("c",
2013 Jan 09
2
Bug in list subset assignment due to NAMED optimization
In R version 2.15.2 (2012-10-26) i386-apple-darwin9.8.0/i386 (32-bit) I get the following: > a <- list(1) > (a[[1]] <- a) [[1]] [[1]][[1]] [1] 1 but > a <- list(1) > b <- a > (a[[1]] <- a) [[1]] [1] 1 And similarly: > a <- list(x=1) > (a$x <- a) $x $x$x [1] 1 but > a <- list(x=1) > b <- a > (a$x <- a) $x [1] 1 In both cases the
2020 Nov 17
2
[External] exists, get and get0 accept silently inputs of length > 1
I noticed the recent commit to R-dev (r79434). Is this wise? I've often used get() in constructions like for (j in ls()) if (is.numeric(x <- get(j))) ... (and often interactively, rather than in a package) Am I to understand that get(j) will now be equivalent to `j` even if j is a string referring putatively to another object? On Sat, 14 Nov 2020 at 01:34, <luke-tierney at
2013 Mar 12
2
Bugs due to naive copying of list elements
Several bugs are present in R-2.15.3 and R-alpha due to naive copying of list elements. The bug below is due to naive copying in subset.c (with similar bugs for matrices and arrays): a<-list(c(1,2),c(3,4),c(5,6)) b<-a[2:3] a[[2]][2]<-9 print(b[[1]][2]) Naive copying in mapply.c leads to the following bug: X<-1+1 f<-function(a,b) X A<-mapply(f,c(1,2,3),c(4,5,6),SIMPLIFY=FALSE)