similar to: lowess output looks wrong (PR#7891)

Hi I need help in the recursive problem. this is my code #Generate two random Numbers minval=20 maxval=100 cutoffValue=50 optVal<- function(cutoffValue,minval,maxval) { x=runif(2) x=x*cutoffValue for( i in 1:2) { if(x[i] < 30 || x[i] >60) # checking it falls between the range { optVal(cutoffValue,minval,maxval) } } return(x) }

Hi, I have some microarray data, cy5 and cy3 values are in log2. Is there a way to check they have undergone lowess normalization ? Thanks Stanley [[alternative HTML version deleted]]

I am 100% certain that there is an easy way to do this, but after experimenting off and on for a couple of days, and searching everywhere I could think of, I haven't been able to find the trick. I have this piece of code: ... attach(d) if (ORDINATE == 'ds') { lo <- loess(percent ~ ncms * ds, d, control=loess.control(trace.hat = 'approximate')) grid <-

I don't really see the point. lowess() is a two-dimensional smoother only so the main point would only be to allow lowess(y ~ x, dat) instead of lowess(dat$x, dat$y). Bill V. -----Original Message----- From: r-devel-bounces@stat.math.ethz.ch [mailto:r-devel-bounces@stat.math.ethz.ch] On Behalf Of Warnes, Gregory R Sent: Wednesday, 21 January 2004 4:48 PM To: 'R-devel' Subject:

As I've mentioned a number of times. I find it very useful to have lowess() become a generic function so that a lowess.formula() can be defined. Below is a patch that makes both changes, as well as updating the corresponding help documentation. Gregory R. Warnes Manager, Non-Clinical Statistics Pfizer Global Research and Development Tel: 860-715-3536 ? DESCRIPTION ? Makefile ?

The lowess() help page refers to documentation in "src/appl/lowess.doc". This was moved to "src/library/stats/src/lowess.doc" in 2007. This patch fixes it: Index: src/library/stats/man/lowess.Rd =================================================================== --- src/library/stats/man/lowess.Rd (revision 79137) +++ src/library/stats/man/lowess.Rd (working copy) @@

Hi, A lowess method is defined in our package for one of our S4 classes. To explicitely define the generic this is being used if (!isGeneric("lowess")) setGeneric("lowess", useAsDefault = lowess) This works fine for many other methods inherited from various R packages. In this case a warning is issued in R CMD check: * checking R code for possible problems ... NOTE

Hello: I have been using R and the locfit package for Unix/Linux for a little while. However, I have had some trouble, as I am trying to do density estimation for bounded independent variables. There is some discussion in the density estimation book by Azzalini, but none in the book by C Loader (creator of locfit). Also, the variables that I am working on are bounded on both sides, not just

This is not a "help" request, just an experience with R that I found amusing. I have a machine learning module that I teach which was originally all symbolic, but has a slowly growing numeric/statistical component. Today I taught a two part lecture on instance based methods for learning, with the first half being simple KNN, then kernel methods for regression. The second half was using

Hello everyone, I cannot seem to find information about objects of class "matrix" and mode "list", and how to handle them (apart from flattening the list). I get this type of object from using sapply(). Sorry for the long example, but the code below illustrates how I get this type of object. Is anyone aware of documentation regarding this object? Thanks very much, Stephen

Colleagues ---------------------------------- System info: R version rw1022 on NT ESS v. 5.1.18 using emacs ver. 20.4 ---------------------------------- I would like to access the residuals from a lowess fit (function lowess() ) as an aid to assessing whether I am over-smoothing or under-smoothing a dataset (as in Cleveland's book "Visualizing data", section 3.3) Unless I

hi: apologies for taking up everyone's time. my problem is probably documented somewhere, but I again cannot find it. (which reminds me: I cannot find a search engine that allows me to search the archives of this very useful mailing list.) * it seems that lines(lowess()) fails to plot certain line segments. (and, what does it do at the x-min and x-max of a data set?) Rather than

code: x <- rnorm(32) y <- rnorm(32) plot(x,y) lines(lowess(x,y),col='red') Now I need to sample the lowess function into matrix where one series will be X and other will be values of lowess at particular X. -- View this message in context: http://r.789695.n4.nabble.com/how-to-sample-lowess-loess-into-matrix-tp3053458p3053458.html Sent from the R help mailing list archive at

Hi All, I've been providing a generic version of lowess() in my 'gregmisc' library, along with a 'lowess.formula' and 'lowess.default'. Can/should these be moved into base? -Greg LEGAL NOTICE Unless expressly stated otherwise, this message is confidential and may be privileged. It is intended for the addressee(s) only. Access to this E-mail by anyone else

I am trying to change the attributes of the lowess lines fit to an xyplot command, but have been unsuccessful in my search of the online help. Right now, both the points and lowess line come out in the same color (blue). I am unsure how I can change the properties of the lowess line separately. xyplot ( SnowLineElevation ~ Year | Model, data = data, ylim = c(0,1800), type =

Dear UseRs: Recently, I have read an article regarding the association between age and lymph node metastases. http://jco.ascopubs.org/content/27/18/2931.long In statistical analysis, the authors stated "Because a nonlinear relationship between age and lymph node involvement was expected based on existing literature, lymph node involvement was also regressed on age using nonparametric

Hi, I have some very noisy, relatively sparse data; a biological response of roughly ~8 subjects at ~8 times points). I've been following the data trend using a lowess line, over-plotted with several values of bandwidth, 'f <- seq(0.3, 0.9, by=0.1)'. At this point, we have no models for these data. I wonder if there is any way under R to assign some sort of confidence interval to

Hi there, I'm plotting some glass RI values just by plotting plot(x) then I put on my lowess smoother lines(lowess(x)) now I want to put on some 95% Confidence Interval bands of the lowess smoother, but don't know how?? Thanks -- Gareth Campbell PhD Candidate The University of Auckland P +649 815 3670 M +6421 256 3511 E gareth.campbell@esr.cri.nz gcam032@gmail.com [[alternative

The summary stats for the xin and yin variables below are correct. However, if I use plot(xin,yin), an exception is thrown saying that "object xin is not found." Also, it is apparent that I can't successfully replace the x and y vectors with values from xin and yin. The four plots on one panel are showing but the range of x and y is only [0,1], and therefore, it seems like an

Moved to R-help from R-SIG-gR. On Thu, 21 Oct 2004 17:44:27 +0800 XP Sun wrote: > hi, everyone, > > this is the first time for me to use R, > would you like to tell me how to use this command? thank you in > advance. > > fit <- principal.curve(y, plot = TRUE, smooth="periodic.lowess", > iter=0) > > when i uesd the parameter > >