similar to: No is.formula()

Just a thought: It would be nice to be able to review the NEWS and/or ChangeLog files for packages via the package web page on CRAN... -Greg Gregory R. Warnes Manager, Non-Clinical Statistics Pfizer Global Research and Development LEGAL NOTICE\ Unless expressly stated otherwise, this messag...{{dropped}}

I've been using a cvs2cl.pl (http://www.red-bean.com/cvs2cl), a nice little perl script to auto-generate GNU-style changelogs from CVS log information. This site also has a proposed XML format for changelogs, and cvs2cl can optionally produce this instead. Finally, they have an XSLT sylesheet that will convert the XML changlong format into an HTML/XHTML page. How about we borrow this tool

This message is in MIME format. Since your mail reader does not understand this format, some or all of this message may not be legible. ------_=_NextPart_000_01C3BE9C.3FB5BC1A Content-Type: text/plain; charset="iso-8859-1" There is a small bug in the implementation of \preformatted in R 1.8.0: The closing "\end{verbatim}" needs to be followed by a newline, since my latex

In a string context, grep, gsub, sub are improperly treating NA (missing) as the string "NA", and returning unexpected results > grep("A", c(NA,"NA")) [1] 1 2 # expected: # [1] 2 > gsub("A", "X", c(NA,"NA")) [1] "NX" "NX" # expected # [1] NA "NX" > sub("A", "X",

I'm seeing an odd error message when running R CMD check gregmisc with R-1.9.0beta_2004-03-22.tar.gz * checking package dependencies ... WARNING Error in switch(type, code = c("R", "r", "S", "s", "q"), data = c("R", : Argument "type" is missing, with no default Execution halted See the information on DESCRIPTION

Dear Greg, Thanks for the new release. The decomposition of the SSQ is just what I need! Regards, Martin. Martin Hoyle, School of Life and Environmental Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK Webpage: http://myprofile.cos.com/martinhoyle >>> gregory_r_warnes at groton.pfizer.com 10/30/02 07:16PM >>> Version 0.7.3 of the gregmisc package

I have a revised version of the gregmisc package, which I've converted into a package bundle each of which has a namespace: gplots, gmodels, gdata, gtoools. Of course, there are interdependencies among these namespaces: gsun374: /tmp [11]> cd gregmisc/ gsun374: gregmisc [12]> grep import */NAMESPACE gdata/NAMESPACE:importFrom(gtools, odd, invalid, mixedsort)

Hi All, This is off topic, but we're drawing a blank here.. > In a presentation I'll be giving next week, I want to include a reference > to a good general text on computing sample sizes for standard experiments. > Can anyone recommend a good book to use for this purpose? > > Thanks, > > -Greg LEGAL NOTICE\ Unless expressly stated otherwise, this

With the recent changes in R 1.9.x, it is now impossible to properly call plot on a formula() where the formula is provided via a named first argument. On today's R-1.9.1-alpha: > x <- 1:10 > y <- rnorm(x,0.25) > > plot(x~y) > > plot(x=x~y) Error in terms.formula(formula, data = data) : argument is not a valid model > > plot(formula=x~y) Error in

When the R_HOME environment variable is set, R issues a warning messages when it starts up. When doing 'make check' this causes the check for eval-etc.R to fail: [...] make[3]: Leaving directory `/Volumes/app/R/src/R-1.4.0_patched_2002-01-24/tests' running strict specific tests make[3]: Entering directory `/Volumes/app/R/src/R-1.4.0_patched_2002-01-24/tests' running code in

As I've mentioned a number of times. I find it very useful to have lowess() become a generic function so that a lowess.formula() can be defined. Below is a patch that makes both changes, as well as updating the corresponding help documentation. Gregory R. Warnes Manager, Non-Clinical Statistics Pfizer Global Research and Development Tel: 860-715-3536 ? DESCRIPTION ? Makefile ?

Today's R 1.9.0 beta: > m1 [,1] [,2] [,3] [,4] [1,] NA NA NA NA [2,] NA NA NA NA [3,] NA NA NA NA [4,] NA NA NA NA > class(m1[1,1]) [1] "list" > cbind(m1,m1) Error in cbind(...) : cannot create a matrix from these types > rbind(m1,m1) Error in rbind(...) : cannot create a matrix from these types > version _

Full_Name: Gregory R. Warnes Version: R 1.3.1 OS: Solaris 2.8 Submission from: (NULL) (192.77.198.200) rpart library version 3.1-2 Error message: > plotcp(fit.thirds.1,ylim=c(0.7,1.5)); Error in plot.default(ns, xerror, axes = FALSE, xlab = "cp", ylab = "X-val Relative Error", : formal argument "ylim" matched by multiple actual arguments > This can be

Third try... > -----Original Message----- > From: Warnes, Gregory R > Sent: Tuesday, February 05, 2002 4:12 PM > To: 'R-bugs' > Subject: layout and piechart diameter problem > > > I've been using layout to create some graphics pages which include pie > charts. (NB: No piechart arguments please, the main chart on the page is > a proper bar chart

What I am doing : create a simple correlation matrix on 41 variables, then plot an heatmap with this program : library(gplots) mat<-cor(temp.alln,use="pairwise.complete.obs") hm<-heatmap.2(mat,symm=T) HM<-format(round(mat[hm[[1]],hm[[2]]],2)) library(RColorBrewer) brewer.pal(10,"Spectral")->mp heatmap.2(mat, symm = TRUE, col = mp,

In R-1.5.0pre (2002-04-08) on Solaris 2.6, the window that X11() creates has a title like: R Graphics: Device 2 (ACTIVE) o iyeP )( y except the funny characters at the end have umlauts and other accents (i.e. extended ASCII characters), and they may be different each time X11() is invoked. There is no loss of functionality; it just looks a little ugly. I saw this behavior in R-1.3.?, it

Version 0.6.0 of the gregmisc package has just been released on CRAN. Description: =========== Package: gregmisc Description: Misc Functions written/maintained by Gregory R. Warnes Title: Greg's Miscellaneous Functions Version: 0.6.0 Date: 2002/09/23 Maintainer: Gregory R. Warnes <Gregory_R_Warnes at groton.pfizer.com> Author: Gregory R. Warnes. Includes code provided by Ben

Version 0.6.0 of the gregmisc package has just been released on CRAN. Description: =========== Package: gregmisc Description: Misc Functions written/maintained by Gregory R. Warnes Title: Greg's Miscellaneous Functions Version: 0.6.0 Date: 2002/09/23 Maintainer: Gregory R. Warnes <Gregory_R_Warnes at groton.pfizer.com> Author: Gregory R. Warnes. Includes code provided by Ben

Dear R People: Is there a binary version for rorca, please? Thanks, Laura mailto: lauraholt_983 at hotmail.com R Windows 1.9.0

In a quick search of the R website just now, I found no mention of a unit testing framework for R. I hope to find something in the style of Java's JUnit, or Python's unittest. Is such a thing available? Thanks, - Paul Shannon Institute for Systems Biology Seattle