similar to: Installer package destroys permission settings on /Applcations (PR#7025)

Hi, I'm having trouble with glmmPQL from the MASS package. I'm trying to fit a model with a binary response variable, two fixed and two random variables (nested), with a sample of about 200,000 data points. Unfortunately, I'm getting an error message that is difficult to understand without knowing the internals of the glmmPQL function. > model <- glmmPQL(primed ~

After upgrading to R 2.6.0, I'm having trouble running lmer: model <- lmer(primed ~ log(dist.time)*role + 1|target.utt, data=data.utts) Error in UseMethod("as.logical") : no applicable method for "as.logical" So I thought I'd upgrade lme4 to the latest version, but unfortunately the compilation fails - perhaps there's a missing #include: R CMD INSTALL

Hi, I was wondering if anyone has successfully linked R against the Condor libraries so that R can be run as a Condor job in the "standard" (not "vanilla") universe. The advantage of this would be that due to checkpointing, jobs can be suspended and transferred to another node. There is a good overview by Xianhong Xie here:

It's probably a beginner's question: How do I show text in boxes? That is, can I specify a background color for text output with text() ? The following doesn't work as I would expect: text(labels="123", 50, 0.5, bg="green") I've experimented with legend(),which will make the box too wide, and also with rect(), which doesn't know the extent of the text

I've got a problem with "mcmcsamp" used with glmer objects produced with "lmer" from the lme4 package. When calling mcmcsamp, I get the error Error in if (var(y) == 0) { : missing value where TRUE/FALSE needed This does not occur with all models, but I can't find anything wrong with the dataset. If the error is in my data, can someone tell me what I am looking

--Apple-Mail-44--797532055 Content-Type: text/plain; charset=US-ASCII; format=flowed; delsp=yes Content-Transfer-Encoding: 7bit I believe read.table may report misleading errors. In this example, where a header line in a file has an incorrect number of row names (28 instead of 29), I get the error message "duplicate row.names are not allowed". However, I cannot not find any

Using the Hmisc package, I tried to create an xYplot (single panel only) and was confused to find that I could not add anything else to the plot (abline, lines, etc.). Thankfully, [1] points out panel functions. This works as expected for panel.abline, but as soon as I'm using panel.lines (or llines or lpoints) from the "lattice" package (version 0.17-17 with R 2.8.1), it

I'm using glmmPQL, and I still have a few problems with it. In addition to the issue reported earlier, I'm getting the following error and I was wondering if there's something I can do about it. Error in logLik.reStruct(object, conLin) : Na/NaN/Inf in foreign function call (arg 3) ... Warnings: 1: Singular precistion matrix in level -1, block 4 (...) 4: "" The

I'm trying to use "predict" with a linear mixed-effects logistic regression model fitted with nlmmPQL from the MASS library. Unfortunately, I'm getting an error "non-conformable arguments" in predict.lme, and I would like to understand why. I have used the same call to "predict" with "glm" models without problems. I assume I'm doing

Hello, I''ve got a list in a view and each of element of it has a link_to_remote and everything worked like a charm. Now I added AJAX pagination and the link_to_remote doesn''t work anymore. This is the partial of the list: <% for character in characters %> <%= character.name %> <%= link_to_remote t(''.add''), :url =>

---------- Forwarded message ---------- From: noreply at rubyforge.org <noreply at rubyforge.org> Date: 11-Apr-2007 15:24 Subject: [ mocha-Bugs-5892 ] Using a setup method in test_case_class destroys subsequent test cases To: noreply at rubyforge.org Bugs item #5892, was opened at 2006-09-25 07:49 You can respond by visiting:

Accessing or listing "mdbox_deleted" contents seems to destroy MDBOX indexes. Examples of commands which triggers this problem ($home being the home directory of $user, and mail_location being mdbox:~/mdbox): doveadm -o mail="mdbox_deleted:$home/mdbox" -f table mailbox status -u "$user" 'messages vsize' INBOX doveadm -v import -s -u "$user"

Hi, Is it normal that "chown $user $file" and "chown :$group $file" destroy the Windows-ACLs? Is it normal that changing the file owner in Windows does not change the file owner in Linux, but changing the file owner in Linux does change the file owner in Windows? This should be mentioned in >

for many versions of ruby, and as many versions of rails, ive been unable to generate docs without deleting this file: lib/rails_generator/generators/components/controller/templates/controller.rb ruby just chews more and more memory until swap fils up and the system has to be reset.. m gems # rdoc --version RDoc V1.0.1 - 20041108 ruby --version ruby 1.8.5 (2006-06-22) [x86_64-linux]

I am having trouble with recovery. Today due to electrical work I powered down my networks Router / DHCP server. My Centos 7 host machines lost their DHCP lease (they are actually static leases). Once I power my Router / DHCP server back up none of my virtual machine were accessible. It appears that when the DHCP lease was lost on the virt server the bridge of the KVM guest were all losts. A

https://bugzilla.samba.org/show_bug.cgi?id=8201 Summary: rsync 3.0.8 destroys SELinux security context of symbolic links Product: rsync Version: 3.0.8 Platform: All OS/Version: All Status: NEW Severity: normal Priority: P5 Component: core AssignedTo: wayned at samba.org

Now that I've got the recent build of Icecast running (thanks everyone), I'm wondering about an OS X installer. Icecast would be even more palatable to the less-techy OSX users if there were an installer for the binary. As long as the installer checked for the dependent libs, everything would be straight forward. Has this been discussed before? Jaime Magiera University of Michigan

On Mar 14, 2005, at 5:28 PM, Dan Stowell wrote: > I don't want to pour water on this idea since a nice installer would > be helpful for the "less-techy" (had to climb a pretty steep learning > curve myself...). no worries. These are just observations. > But I do want to point out that both "fink" and "darwinports" provide > nice ways to install

When i use zpool labelclear, it wipes the whole disk including gpt data. So the whole disk is empty and i need to create the gpt partitions again. Is this supposed to work like this? The man page suggests that it only wipes the ZFS metadata. zpool labelclear [-f] device Removes ZFS label information from the specified device. The device must not be part of an active pool

Hi. CentOS 5.4 64-bit with SELinux, happily running for over a year, suddenly httpd fails to start up, getting an error message like: Starting httpd: Syntax error on line X of /etc/httpd/conf.d/php.conf: Cannot load /etc/httpd/modules/libphp5.so into server: libxml2.so.2: failed to map segment from shared object: Permission denied I turned off SELinux and was able to start httpd. But what went